Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G13.19 Capsicum annuum HOM05D001578 ORTHO05D001207 3.1e-41 171.4 89 100.0
CAN.G305.59 Capsicum annuum HOM05D001578 ORTHO05D001207 3.6e-29 131.3 86 76.7
CAN.G1359.1 Capsicum annuum HOM05D001578 ORTHO05D001207 9.7e-27 123.2 86 73.3
Peaxi162Scf01160g00142 Petunia axillaris HOM05D001578 ORTHO05D001207 2.7e-24 115.2 86 67.4
CAN.G484.68 Capsicum annuum HOM05D001578 ORTHO05D001207 2.2e-23 112.1 86 64.0
CAN.G1692.2 Capsicum annuum HOM05D001578 ORTHO05D001207 3.8e-23 111.3 69 87.0
PGSC0003DMG400004617 Solanum tuberosum HOM05D001578 ORTHO05D001207 1.5e-22 109.4 87 66.7
Solyc12g099200.2 Solanum lycopersicum HOM05D001578 ORTHO05D001207 7.2e-22 107.1 87 65.5
Sopen12g033880 Solanum pennellii HOM05D001578 ORTHO05D001207 9.4e-22 106.7 87 64.4
PGSC0003DMG400004618 Solanum tuberosum HOM05D001578 ORTHO05D001207 1.6e-21 105.9 87 65.5
Solyc12g099210.2 Solanum lycopersicum HOM05D001578 ORTHO05D001207 2.7e-21 105.1 87 64.4
Nitab4.5_0000651g0280 Nicotiana tabacum HOM05D001578 ORTHO05D001207 5.2e-20 100.9 86 59.3
Nitab4.5_0004165g0070 Nicotiana tabacum HOM05D001578 ORTHO05D001207 8.8e-20 100.1 86 66.3
Nitab4.5_0002150g0080 Nicotiana tabacum HOM05D001578 ORTHO05D001207 3.5e-16 88.2 86 58.1
CAN.G913.13 Capsicum annuum HOM05D001578 ORTHO05D001207 7.7e-16 87.0 65 72.3
CAN.G1075.28 Capsicum annuum HOM05D001578 ORTHO05D001207 9.5e-14 80.1 87 51.7
Nitab4.5_0002119g0010 Nicotiana tabacum HOM05D001578 ORTHO05D001207 3.6e-13 78.2 68 55.9
Sopen12g033890 Solanum pennellii HOM05D001578 ORTHO05D001207 3.0e-12 75.1 58 63.8
Peaxi162Scf00364g00014 Petunia axillaris HOM05D001578 ORTHO05D001207 1.3e-10 69.7 82 46.3
Peaxi162Scf00548g00645 Petunia axillaris HOM05D001578 ORTHO05D001207 1.7e-10 69.3 82 46.3
Peaxi162Scf00228g00619 Petunia axillaris HOM05D000064 ORTHO05D001207 2.2e-10 68.9 56 62.5
Glyma.17G036300 Glycine max HOM05D001578 ORTHO05D001207 2.4e-09 65.5 86 39.5
Peaxi162Scf00228g00064 Petunia axillaris HOM05D001578 ORTHO05D001207 2.4e-09 65.5 87 39.1
MSTRG.24829 Avicennia marina HOM05D001578 ORTHO05D001207 1.2e-08 63.2 86 43.0
TWI53G0804 Tripterygium wilfordii HOM05D001578 ORTHO05D001207 1.2e-08 63.2 82 42.7
CSS0020686 Camellia sinensis var. sinensis HOM05D001578 ORTHO05D001207 1.6e-08 62.8 86 47.7
Peaxi162Scf01160g00112 Petunia axillaris HOM05D001578 ORTHO05D001207 1.6e-08 62.8 86 40.7
CAN.G1971.3 Capsicum annuum HOM05D001578 ORTHO05D001207 2.0e-08 62.4 41 78.0
Manes.15G002100 Manihot esculenta HOM05D001578 ORTHO05D001207 2.0e-08 62.4 87 40.2
Phvul.003G117100 Phaseolus vulgaris HOM05D001578 ORTHO05D001207 2.0e-08 62.4 86 43.0
QL06p012845 Quercus lobata HOM05D001578 ORTHO05D001207 2.7e-08 62.0 87 40.2
MSTRG.24828 Avicennia marina HOM05D001578 ORTHO05D001207 5.9e-08 60.8 86 41.9
CSS0012414 Camellia sinensis var. sinensis HOM05D001578 ORTHO05D001207 5.9e-08 60.8 86 46.5
ECA233G5780 Erigeron canadensis HOM05D001578 ORTHO05D001207 7.8e-08 60.5 85 42.4
VMungo1215G0431 Vigna mungo HOM05D001578 ORTHO05D001207 7.8e-08 60.5 87 41.4
QL06p012837 Quercus lobata HOM05D001578 ORTHO05D001207 1.3e-07 59.7 87 39.1
TPR.G25429 Trifolium pratense HOM05D001578 ORTHO05D001207 1.3e-07 59.7 86 40.7
Ciclev10006791m.g Citrus clementina HOM05D001578 ORTHO05D001207 2.3e-07 58.9 87 43.7
THA.LOC104820316 Tarenaya hassleriana HOM05D001578 ORTHO05D001207 2.3e-07 58.9 85 43.5
PGSC0003DMG400004616 Solanum tuberosum HOM05D001578 ORTHO05D001207 2.9e-07 58.5 89 42.7
Sopen12g033870 Solanum pennellii HOM05D001578 ORTHO05D001207 3.9e-07 58.2 89 40.4
Cc03_g00600 Coffea canephora HOM05D001578 ORTHO05D001207 5.0e-07 57.8 85 41.2
Sabra10G0043600 Salix brachista HOM05D001578 ORTHO05D001207 5.0e-07 57.8 86 40.7
Solyc12g099190.1 Solanum lycopersicum HOM05D001578 ORTHO05D001207 5.0e-07 57.8 89 40.4
Dinv44262 Davidia involucrata HOM05D001578 ORTHO05D001207 6.6e-07 57.4 86 39.5
Lsat_1_v5_gn_6_301 Lactuca sativa HOM05D001578 ORTHO05D001207 6.6e-07 57.4 85 40.0
Medtr4g122890 Medicago truncatula HOM05D001578 ORTHO05D001207 8.6e-07 57.0 86 40.7
Psat0s2818g0040 Pisum sativum HOM05D001578 ORTHO05D001207 8.6e-07 57.0 86 38.4
Potri.010G063000 Populus trichocarpa HOM05D001578 ORTHO05D001207 1.1e-06 56.6 86 40.7
TPR.G25401 Trifolium pratense HOM05D001578 ORTHO05D001207 1.5e-06 56.2 86 40.7
Lalb_Chr12g0200771 Lupinus albus HOM05D001578 ORTHO05D001207 1.9e-06 55.8 86 38.4
VMungo1215G1199 Vigna mungo HOM05D001578 ORTHO05D001207 1.9e-06 55.8 86 39.5
HanXRQChr13g0395221 Helianthus annuus HOM05D001578 ORTHO05D001207 2.5e-06 55.5 85 37.6
TPR.G25407 Trifolium pratense HOM05D001578 ORTHO05D001207 3.3e-06 55.1 86 37.2
FvH4_5g04330 Fragaria vesca HOM05D001578 ORTHO05D001207 5.6e-06 54.3 86 38.4
Lalb_Chr07g0181941 Lupinus albus HOM05D001578 ORTHO05D001207 5.6e-06 54.3 86 34.9
Nitab4.5_0002294g0130 Nicotiana tabacum HOM05D001578 ORTHO05D001207 5.6e-06 54.3 88 37.5
MSTRG.16314 Avicennia marina HOM05D001578 ORTHO05D001207 7.3e-06 53.9 85 35.3
Manes.03G207100 Manihot esculenta HOM05D001578 ORTHO05D001207 7.3e-06 53.9 85 37.6
Psat0s4829g0040 Pisum sativum HOM05D001578 ORTHO05D001207 7.3e-06 53.9 86 38.4
FAN18G0021 Fragaria x ananassa HOM05D001578 ORTHO05D001207 9.5e-06 53.5 86 38.4
Lalb_Chr12g0200781 Lupinus albus HOM05D001578 ORTHO05D001207 9.5e-06 53.5 86 34.9


User provided reference genes

Program Settings