Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1285.3 Capsicum annuum HOM05D004726 ORTHO05D005986 6.4e-41 170.2 82 100.0
PGSC0003DMG400030549 Solanum tuberosum HOM05D004726 ORTHO05D005986 2.4e-11 72.0 60 63.3
TWI56G1181 Tripterygium wilfordii HOM05D004726 ORTHO05D005986 1.5e-10 69.3 61 57.4
QL02p073257 Quercus lobata HOM05D004726 ORTHO05D005986 2.0e-10 68.9 61 57.4
Solyc05g008260.3 Solanum lycopersicum HOM05D004726 ORTHO05D005986 2.6e-10 68.6 59 61.0
Sopen05g004100 Solanum pennellii HOM05D004726 ORTHO05D005986 2.6e-10 68.6 59 61.0
AUR62018238 Chenopodium quinoa HOM05D004726 ORTHO05D005986 3.4e-10 68.2 61 57.4
AUR62037765 Chenopodium quinoa HOM05D004726 ORTHO05D005986 3.4e-10 68.2 61 57.4
Sabra16G0217200 Salix brachista HOM05D004726 ORTHO05D005986 3.4e-10 68.2 61 57.4
ClCG05G012910 Citrullus lanatus HOM05D004726 ORTHO05D005986 4.5e-10 67.8 61 57.4
MELO3C014786.2 Cucumis melo HOM05D004726 ORTHO05D005986 4.5e-10 67.8 61 57.4
CsaV3_3G027570 Cucumis sativus L. HOM05D004726 ORTHO05D005986 4.5e-10 67.8 61 57.4
Eucgr.J02276 Eucalyptus grandis HOM05D004726 ORTHO05D005986 4.5e-10 67.8 61 57.4
Nitab4.5_0004776g0030 Nicotiana tabacum HOM05D004726 ORTHO05D005986 5.8e-10 67.4 60 56.7
Potri.001G336400 Populus trichocarpa HOM05D004726 ORTHO05D005986 5.8e-10 67.4 60 58.3
Sed0019499 Sechium edule HOM05D004726 ORTHO05D005986 5.8e-10 67.4 61 55.7
SGA_v2.0_scaffold135G34934 Striga asiatica HOM05D004726 ORTHO05D005986 5.8e-10 67.4 46 67.4
Migut.G00516 Erythranthe guttata HOM05D004726 ORTHO05D005986 7.6e-10 67.0 61 55.7
Glyma.05G072300 Glycine max HOM05D004726 ORTHO05D005986 7.6e-10 67.0 61 57.4
SalBow2G0243 Salvia bowleyana HOM05D004726 ORTHO05D005986 7.6e-10 67.0 61 54.1
HPP92_015461 Vanilla planifolia HOM05D004726 ORTHO05D005986 7.6e-10 67.0 46 65.2
CiPaw.03G049600 Carya illinoinensis HOM05D004726 ORTHO05D005986 1.0e-09 66.6 46 65.2
MD17G1018800 Malus domestica HOM05D004726 ORTHO05D005986 1.0e-09 66.6 46 65.2
Peaxi162Scf00205g00121 Petunia axillaris HOM05D004726 ORTHO05D005986 1.0e-09 66.6 60 58.3
Prupe.3G298800 Prunus persica HOM05D004726 ORTHO05D005986 1.0e-09 66.6 46 65.2
Cfa007289 Carpinus fangiana HOM05D004726 ORTHO05D005986 1.3e-09 66.2 61 54.1
Manes.17G107900 Manihot esculenta HOM05D004726 ORTHO05D005986 1.3e-09 66.2 61 55.7
Sed0012188 Sechium edule HOM05D004726 ORTHO05D005986 1.3e-09 66.2 46 65.2
Cc07_g00350 Coffea canephora HOM05D004726 ORTHO05D005986 1.7e-09 65.9 61 55.7
Dinv33391 Davidia involucrata HOM05D004726 ORTHO05D005986 1.7e-09 65.9 61 54.1
THA.LOC104821108 Tarenaya hassleriana HOM05D004726 ORTHO05D005986 1.7e-09 65.9 61 55.7
Duzib187G0212 Durio zibethinus HOM05D004726 ORTHO05D005986 2.2e-09 65.5 61 55.7
Nn3g16582 Nelumbo nucifera HOM05D004726 ORTHO05D005986 2.2e-09 65.5 61 55.7
Nn4g22464 Nelumbo nucifera HOM05D004726 ORTHO05D005986 2.2e-09 65.5 61 55.7
Oeu048592.1 Olea europaea HOM05D004726 ORTHO05D005986 2.2e-09 65.5 46 65.2
PGR083G2241 Punica granatum HOM05D004726 ORTHO05D005986 2.2e-09 65.5 58 58.6
Hund13042 Selenicereus undatus HOM05D004726 ORTHO05D005986 2.2e-09 65.5 61 55.7
CANSAT64G1163 Cannabis sativa HOM05D004726 ORTHO05D005986 2.9e-09 65.1 46 63.0
Glyma.19G055500 Glycine max HOM05D004726 ORTHO05D005986 2.9e-09 65.1 46 65.2
Lju41A46T85 Lonicera japonica HOM05D004726 ORTHO05D005986 2.9e-09 65.1 61 54.1
Sc07g0004390 Simmondsia chinensis HOM05D004726 ORTHO05D005986 2.9e-09 65.1 60 55.0
ECA238G2031 Erigeron canadensis HOM05D004726 ORTHO05D005986 3.8e-09 64.7 46 63.0
FvH4_6g52410 Fragaria vesca HOM05D004726 ORTHO05D005986 3.8e-09 64.7 45 66.7
FAN14G5799 Fragaria x ananassa HOM05D004726 ORTHO05D005986 3.8e-09 64.7 45 66.7
Lalb_Chr22g0360561 Lupinus albus HOM05D004726 ORTHO05D005986 3.8e-09 64.7 61 55.7
CSS0005841 Camellia sinensis var. sinensis HOM05D004726 ORTHO05D005986 5.0e-09 64.3 61 54.1
CSS0026983 Camellia sinensis var. sinensis HOM05D004726 ORTHO05D005986 5.0e-09 64.3 61 54.1
Ciclev10014283m.g Citrus clementina HOM05D004726 ORTHO05D005986 5.0e-09 64.3 61 54.1
COL.COLO4_29260 Corchorus olitorius HOM05D004726 ORTHO05D005986 5.0e-09 64.3 61 52.5
Oeu033801.1 Olea europaea HOM05D004726 ORTHO05D005986 5.0e-09 64.3 42 69.0
SHI03847 Sapria himalayana HOM05D004726 ORTHO05D005986 5.0e-09 64.3 46 60.9
Thecc.04G026000 Theobroma cacao HOM05D004726 ORTHO05D005986 5.0e-09 64.3 61 55.7
Atru.chr3.1245 Acer truncatum HOM05D004726 ORTHO05D005986 6.5e-09 63.9 61 54.1
HanXRQChr14g0451431 Helianthus annuus HOM05D004726 ORTHO05D005986 6.5e-09 63.9 46 63.0
Lsat_1_v5_gn_2_93500 Lactuca sativa HOM05D004726 ORTHO05D005986 6.5e-09 63.9 46 63.0
RcHm_v2.0_Chr2g0174041 Rosa chinensis HOM05D004726 ORTHO05D005986 6.5e-09 63.9 46 63.0
Ah.12g055330 Amaranthus hybridus HOM05D004726 ORTHO05D005986 8.4e-09 63.5 61 54.1
ATR0824G115 Amborella trichopoda HOM05D004726 ORTHO05D005986 8.4e-09 63.5 61 55.7
FAN02G2743 Fragaria x ananassa HOM05D004726 ORTHO05D005986 8.4e-09 63.5 45 64.4
Gohir.A09G032200 Gossypium hirsutum HOM05D004726 ORTHO05D005986 8.4e-09 63.5 61 52.5
Gohir.D09G032300 Gossypium hirsutum HOM05D004726 ORTHO05D005986 8.4e-09 63.5 61 52.5
Gorai.006G037200 Gossypium raimondii HOM05D004726 ORTHO05D005986 8.4e-09 63.5 61 52.5
MD09G1018400 Malus domestica HOM05D004726 ORTHO05D005986 8.4e-09 63.5 46 63.0
vmacro05911 Vaccinium macrocarpon HOM05D004726 ORTHO05D005986 8.4e-09 63.5 61 52.5
vmacro05915 Vaccinium macrocarpon HOM05D004726 ORTHO05D005986 8.4e-09 63.5 61 52.5
Actinidia36156 Actinidia chinensis HOM05D004726 ORTHO05D005986 1.1e-08 63.2 46 60.9
Aa31LG5G10860 Aethionema arabicum HOM05D004726 ORTHO05D005986 1.1e-08 63.2 61 54.1
DCAR_002964 Daucus carota HOM05D004726 ORTHO05D005986 1.1e-08 63.2 45 64.4
FAN05G3820 Fragaria x ananassa HOM05D004726 ORTHO05D005986 1.1e-08 63.2 45 62.2
PSO386G0103 Papaver somniferum HOM05D004726 ORTHO05D005986 1.1e-08 63.2 61 55.7
Phvul.004G058000 Phaseolus vulgaris HOM05D004726 ORTHO05D005986 1.1e-08 63.2 42 64.3
VMungo1383G2700 Vigna mungo HOM05D004726 ORTHO05D005986 1.1e-08 63.2 60 48.3
Ah.11g044820 Amaranthus hybridus HOM05D004726 ORTHO05D005986 1.4e-08 62.8 46 58.7
Ca_04399_v3 Cicer arietinum L. HOM05D004726 ORTHO05D005986 1.4e-08 62.8 42 64.3
VMungo0464G1053 Vigna mungo HOM05D004726 ORTHO05D005986 1.4e-08 62.8 61 50.8
Medtr0044s0180 Medicago truncatula HOM05D004726 ORTHO05D005986 1.9e-08 62.4 46 60.9
Os01g0904500 Oryza sativa ssp. japonica HOM05D004726 ORTHO05D005986 1.9e-08 62.4 42 66.7
PSO017G1160 Papaver somniferum HOM05D004726 ORTHO05D005986 1.9e-08 62.4 45 62.2
TPR.G7511 Trifolium pratense HOM05D004726 ORTHO05D005986 1.9e-08 62.4 61 52.5
arahy.Tifrunner.gnm1.ann1.2353RE Arachis hypogaea HOM05D004726 ORTHO05D005986 2.5e-08 62.0 42 64.3
arahy.Tifrunner.gnm1.ann1.Q8ZL0R Arachis hypogaea HOM05D004726 ORTHO05D005986 2.5e-08 62.0 42 64.3
Cpa.g.sc130.48 Carica papaya HOM05D004726 ORTHO05D005986 2.5e-08 62.0 61 52.5
Ca_03877_v3 Cicer arietinum L. HOM05D004726 ORTHO05D005986 2.5e-08 62.0 42 64.3
Glyma.16G063900 Glycine max HOM05D004726 ORTHO05D005986 2.5e-08 62.0 42 57.1
Lalb_Chr21g0317631 Lupinus albus HOM05D004726 ORTHO05D005986 2.5e-08 62.0 42 61.9
Medtr6g022320 Medicago truncatula HOM05D004726 ORTHO05D005986 2.5e-08 62.0 42 64.3
PSO017G0372 Papaver somniferum HOM05D004726 ORTHO05D005986 2.5e-08 62.0 45 62.2
PSO478G3762 Papaver somniferum HOM05D004726 ORTHO05D005986 2.5e-08 62.0 45 62.2
GSVIVG01003968001 Vitis vinifera HOM05D004726 ORTHO05D005986 2.5e-08 62.0 61 52.5
Aqoxy5G03586 Aquilegia oxysepala HOM05D004726 ORTHO05D005986 3.2e-08 61.6 61 52.5
Lj2g0016129 Lotus japonicus HOM05D004726 ORTHO05D005986 3.2e-08 61.6 42 64.3
Phvul.008G146800 Phaseolus vulgaris HOM05D004726 ORTHO05D005986 3.2e-08 61.6 41 61.0
EL10Ac2g03214 Beta vulgaris HOM05D004726 ORTHO05D005986 4.2e-08 61.2 46 58.7
Sp3g00330 Schrenkiella parvula HOM05D004726 ORTHO05D005986 5.5e-08 60.8 46 58.7
AT3G01720 Arabidopsis thaliana HOM05D004726 ORTHO05D005986 7.1e-08 60.5 46 60.9
Thhalv10020079m.g Eutrema salsugineum HOM05D004726 ORTHO05D005986 7.1e-08 60.5 61 50.8
Psat1g083400 Pisum sativum HOM05D004726 ORTHO05D005986 7.1e-08 60.5 41 65.9
Lj1g0014024 Lotus japonicus HOM05D004726 ORTHO05D005986 9.3e-08 60.1 42 64.3
TPR.G9063 Trifolium pratense HOM05D004726 ORTHO05D005986 9.3e-08 60.1 61 50.8
C03p39450 Brassica napus HOM05D004726 ORTHO05D005986 1.2e-07 59.7 61 49.2
BolC3t16213H Brassica oleracea HOM05D004726 ORTHO05D005986 1.2e-07 59.7 61 49.2
SMO117G0207 Selaginella moellendorffii HOM05D004726 ORTHO05D005986 2.1e-07 58.9 46 60.9
AL3G10420 Arabidopsis lyrata HOM05D004726 ORTHO05D005986 2.7e-07 58.5 61 49.2
Carub.0003s0033 Capsella rubella HOM05D004726 ORTHO05D005986 2.7e-07 58.5 61 50.8
BcaC01g04537 Brassica carinata HOM05D004726 ORTHO05D005986 3.5e-07 58.2 46 56.5
A03p32390 Brassica napus HOM05D004726 ORTHO05D005986 3.5e-07 58.2 46 56.5
BraA03t12409Z Brassica rapa HOM05D004726 ORTHO05D005986 3.5e-07 58.2 46 56.5
Mapoly0014s0026 Marchantia polymorpha HOM05D004726 ORTHO05D005986 6.1e-07 57.4 45 62.2
Psat0s1369g0120 Pisum sativum HOM05D004726 ORTHO05D005986 7.9e-07 57.0 42 59.5
Oeu050441.1 Olea europaea HOM05D004726 ORTHO05D005986 2.3e-06 55.5 46 52.2


User provided reference genes

Program Settings