Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1280.40 Capsicum annuum HOM05D006913 ORTHO05D008720 1.5e-102 376.3 204 100.0
Solyc06g009400.3 Solanum lycopersicum HOM05D006913 ORTHO05D008720 4.4e-75 285.0 191 82.2
PGSC0003DMG400007277 Solanum tuberosum HOM05D006913 ORTHO05D008720 1.7e-74 283.1 197 79.7
Sopen06g004130 Solanum pennellii HOM05D006913 ORTHO05D008720 4.2e-73 278.5 196 79.6
Nitab4.5_0000363g0020 Nicotiana tabacum HOM05D006913 ORTHO05D008720 4.9e-66 255.0 206 72.3
Nitab4.5_0003324g0110 Nicotiana tabacum HOM05D006913 ORTHO05D008720 6.4e-66 254.6 206 71.4
Migut.D00043 Erythranthe guttata HOM05D006913 ORTHO05D008720 3.0e-63 245.7 183 73.8
PSO724G1078 Papaver somniferum HOM05D006913 ORTHO05D008720 5.1e-63 245.0 181 70.2
PSO170G2504 Papaver somniferum HOM05D006913 ORTHO05D008720 1.5e-62 243.4 177 71.8
Thecc.01G320200 Theobroma cacao HOM05D006913 ORTHO05D008720 1.5e-62 243.4 180 73.3
Haze_05096 Corylus avellana HOM05D006913 ORTHO05D008720 2.5e-62 242.7 161 77.6
Cfa004859 Carpinus fangiana HOM05D006913 ORTHO05D008720 3.3e-62 242.3 161 77.6
SalBow3G0392 Salvia bowleyana HOM05D006913 ORTHO05D008720 3.3e-62 242.3 155 80.6
MSTRG.21716 Avicennia marina HOM05D006913 ORTHO05D008720 3.6e-61 238.8 183 72.7
CSS0013168 Camellia sinensis var. sinensis HOM05D006913 ORTHO05D008720 4.8e-61 238.4 172 73.8
Dinv12109 Davidia involucrata HOM05D006913 ORTHO05D008720 6.2e-61 238.0 149 82.6
TAR362G1022 Trochodendron aralioides HOM05D006913 ORTHO05D008720 6.2e-61 238.0 140 84.3
Nitab4.5_0000222g0190 Nicotiana tabacum HOM05D006913 ORTHO05D008720 8.1e-61 237.7 185 70.8
Duzib138G1774 Durio zibethinus HOM05D006913 ORTHO05D008720 1.1e-60 237.3 183 73.2
TWI59G1195 Tripterygium wilfordii HOM05D006913 ORTHO05D008720 1.1e-60 237.3 144 81.9
CSS0007691 Camellia sinensis var. sinensis HOM05D006913 ORTHO05D008720 1.4e-60 236.9 172 73.8
Manes.01G231800 Manihot esculenta HOM05D006913 ORTHO05D008720 3.1e-60 235.7 181 68.0
Hma1.2p1_0408F.1_g146440 Hydrangea macrophylla HOM05D006913 ORTHO05D008720 6.9e-60 234.6 152 80.3
Ciclev10022378m.g Citrus clementina HOM05D006913 ORTHO05D008720 9.0e-60 234.2 143 81.8
Cpa.g.c29544.2 Carica papaya HOM05D006913 ORTHO05D008720 1.5e-59 233.4 146 78.8
ATR0693G068 Amborella trichopoda HOM05D006913 ORTHO05D008720 2.0e-59 233.0 145 80.7
CiPaw.07G121500 Carya illinoinensis HOM05D006913 ORTHO05D008720 2.0e-59 233.0 161 75.2
Peaxi162Scf00058g00218 Petunia axillaris HOM05D006913 ORTHO05D008720 2.6e-59 232.6 199 69.8
Prupe.3G005300 Prunus persica HOM05D006913 ORTHO05D008720 2.6e-59 232.6 180 67.2
GSVIVG01028181001 Vitis vinifera HOM05D006913 ORTHO05D008720 2.6e-59 232.6 144 83.3
FAN28G1862 Fragaria x ananassa HOM05D006913 ORTHO05D008720 7.6e-59 231.1 149 77.9
Atru.chr5.924 Acer truncatum HOM05D006913 ORTHO05D008720 1.7e-58 229.9 178 70.8
FvH4_1g26590 Fragaria vesca HOM05D006913 ORTHO05D008720 3.8e-58 228.8 149 77.2
MD17G1280100 Malus domestica HOM05D006913 ORTHO05D008720 3.8e-58 228.8 176 68.8
Dinv33147 Davidia involucrata HOM05D006913 ORTHO05D008720 4.9e-58 228.4 198 66.7
Nn3g21840 Nelumbo nucifera HOM05D006913 ORTHO05D008720 4.9e-58 228.4 153 76.5
QL12p018506 Quercus lobata HOM05D006913 ORTHO05D008720 1.1e-57 227.3 180 70.0
RcHm_v2.0_Chr3g0486731 Rosa chinensis HOM05D006913 ORTHO05D008720 1.1e-57 227.3 156 73.1
Aqoxy5G02741 Aquilegia oxysepala HOM05D006913 ORTHO05D008720 1.9e-57 226.5 142 79.6
PGR083G1650 Punica granatum HOM05D006913 ORTHO05D008720 3.2e-57 225.7 160 73.1
CsaV3_7G030270 Cucumis sativus L. HOM05D006913 ORTHO05D008720 4.2e-57 225.3 185 67.6
MBI18_g09652_MAGBIO Magnolia biondii HOM05D006913 ORTHO05D008720 5.5e-57 224.9 185 67.0
MD09G1287900 Malus domestica HOM05D006913 ORTHO05D008720 5.5e-57 224.9 152 74.3
Glyma.19G219300 Glycine max HOM05D006913 ORTHO05D008720 7.1e-57 224.6 140 81.4
MELO3C023629.2 Cucumis melo HOM05D006913 ORTHO05D008720 9.3e-57 224.2 186 67.7
Sed0005932 Sechium edule HOM05D006913 ORTHO05D008720 2.7e-56 222.6 138 81.2
MBI18_g11536_MAGBIO Magnolia biondii HOM05D006913 ORTHO05D008720 3.5e-56 222.2 183 67.8
Sed0008492 Sechium edule HOM05D006913 ORTHO05D008720 3.5e-56 222.2 140 79.3
Medtr7g109970 Medicago truncatula HOM05D006913 ORTHO05D008720 6.0e-56 221.5 144 79.2
TPR.G4038 Trifolium pratense HOM05D006913 ORTHO05D008720 6.0e-56 221.5 140 79.3
THA.LOC104801315 Tarenaya hassleriana HOM05D006913 ORTHO05D008720 7.9e-56 221.1 162 70.4
VMungo1383G0882 Vigna mungo HOM05D006913 ORTHO05D008720 7.9e-56 221.1 144 79.2
unitig_578.g16634 Utricularia gibba HOM05D006913 ORTHO05D008720 1.0e-55 220.7 150 75.3
arahy.Tifrunner.gnm1.ann1.6PPK8V Arachis hypogaea HOM05D006913 ORTHO05D008720 2.3e-55 219.5 148 77.0
Potri.002G191300 Populus trichocarpa HOM05D006913 ORTHO05D008720 2.3e-55 219.5 148 75.7
HPP92_002654 Vanilla planifolia HOM05D006913 ORTHO05D008720 6.7e-55 218.0 139 79.9
Sc05g0000220 Simmondsia chinensis HOM05D006913 ORTHO05D008720 1.1e-54 217.2 138 77.5
Lalb_Chr04g0260061 Lupinus albus HOM05D006913 ORTHO05D008720 1.9e-54 216.5 163 69.3
Lj1g0024926 Lotus japonicus HOM05D006913 ORTHO05D008720 2.5e-54 216.1 142 79.6
AT4G01900 Arabidopsis thaliana HOM05D006913 ORTHO05D008720 4.3e-54 215.3 139 77.7
CDE11G0810 Ceratophyllum demersum HOM05D006913 ORTHO05D008720 1.3e-53 213.8 193 62.7
Carub.0006s3531 Capsella rubella HOM05D006913 ORTHO05D008720 4.8e-53 211.8 133 78.2
Rhsim01G0292800 Rhododendron simsii HOM05D006913 ORTHO05D008720 8.1e-53 211.1 178 66.3
AL6G51370 Arabidopsis lyrata HOM05D006913 ORTHO05D008720 3.1e-52 209.1 133 76.7
FAN26G0114 Fragaria x ananassa HOM05D006913 ORTHO05D008720 3.1e-52 209.1 181 63.5
Glyma.03G222100 Glycine max HOM05D006913 ORTHO05D008720 3.1e-52 209.1 159 70.4
Sp6g01770 Schrenkiella parvula HOM05D006913 ORTHO05D008720 3.1e-52 209.1 132 78.8
ClCG09G004810 Citrullus lanatus HOM05D006913 ORTHO05D008720 4.0e-52 208.8 208 60.1
Psat3g018680 Pisum sativum HOM05D006913 ORTHO05D008720 4.0e-52 208.8 131 79.4
Cc01_g21970 Coffea canephora HOM05D006913 ORTHO05D008720 6.9e-52 208.0 130 81.5
DCAR_002917 Daucus carota HOM05D006913 ORTHO05D008720 9.0e-52 207.6 184 64.1
Aa31LG5G1440 Aethionema arabicum HOM05D006913 ORTHO05D008720 1.5e-51 206.8 135 76.3
CiPaw.08G086000 Carya illinoinensis HOM05D006913 ORTHO05D008720 1.5e-51 206.8 153 73.9
Thhalv10028983m.g Eutrema salsugineum HOM05D006913 ORTHO05D008720 1.5e-51 206.8 132 78.8
FAN19G0677 Fragaria x ananassa HOM05D006913 ORTHO05D008720 1.5e-51 206.8 181 63.0
BcaB01g02398 Brassica carinata HOM05D006913 ORTHO05D008720 2.6e-51 206.1 141 74.5
A03p31400 Brassica napus HOM05D006913 ORTHO05D008720 7.6e-51 204.5 141 73.8
BcaC01g06792 Brassica carinata HOM05D006913 ORTHO05D008720 1.3e-50 203.8 141 73.8
BolC3t16112H Brassica oleracea HOM05D006913 ORTHO05D008720 1.3e-50 203.8 141 73.8
BraA03t12321Z Brassica rapa HOM05D006913 ORTHO05D008720 1.3e-50 203.8 141 73.8
C03p38310 Brassica napus HOM05D006913 ORTHO05D008720 1.7e-50 203.4 180 62.8
Os05g0133100 Oryza sativa ssp. japonica HOM05D006913 ORTHO05D008720 2.9e-50 202.6 132 76.5
Sabra02G0164300 Salix brachista HOM05D006913 ORTHO05D008720 2.5e-49 199.5 181 62.4
BcaB01g02393 Brassica carinata HOM05D006913 ORTHO05D008720 2.1e-48 196.4 133 75.2
arahy.Tifrunner.gnm1.ann1.IRZ7G5 Arachis hypogaea HOM05D006913 ORTHO05D008720 6.0e-48 194.9 147 70.7
Mapoly0061s0127 Marchantia polymorpha HOM05D006913 ORTHO05D008720 6.0e-48 194.9 128 71.9
Solyc01g015000.3 Solanum lycopersicum HOM05D006913 ORTHO05D008720 1.3e-47 193.7 112 90.2
Pp3c4_15530 Physcomitrium patens HOM05D006913 ORTHO05D008720 2.3e-47 193.0 135 69.6
COL.COLO4_23180 Corchorus olitorius HOM05D006913 ORTHO05D008720 1.0e-42 177.6 105 85.7
Lj1C13T3 Lonicera japonica HOM05D006913 ORTHO05D008720 1.0e-42 177.6 102 90.2
vmacro15097 Vaccinium macrocarpon HOM05D006913 ORTHO05D008720 5.0e-42 175.3 105 84.8
Eucgr.H00899 Eucalyptus grandis HOM05D006913 ORTHO05D008720 1.9e-41 173.3 152 64.5
AagrBONN_evm.TU.Sc2ySwM_228.182 Anthoceros agrestis HOM05D006913 ORTHO05D008720 2.5e-41 172.9 122 70.5
SGA_v2.0_scaffold80G25710 Striga asiatica HOM05D006913 ORTHO05D008720 3.6e-40 169.1 131 74.0
AUR62024592 Chenopodium quinoa HOM05D006913 ORTHO05D008720 6.1e-40 168.3 107 78.5
Ca_09230_v3 Cicer arietinum L. HOM05D006913 ORTHO05D008720 1.1e-38 164.1 96 85.4
SEGI_19322 Sequoiadendron giganteum HOM05D006913 ORTHO05D008720 8.2e-37 157.9 99 80.8
SMO364G0946 Selaginella moellendorffii HOM05D006913 ORTHO05D008720 9.0e-36 154.5 104 75.0
FAN23G2363 Fragaria x ananassa HOM05D000049 ORTHO05D000027 1.0e-34 151.0 99 78.8
Duzib211G0548 Durio zibethinus HOM05D006913 ORTHO05D008720 1.1e-33 147.5 107 69.2
Oeu038057.1 Olea europaea HOM05D006913 ORTHO05D008720 7.9e-32 141.4 147 55.1
Phvul.001G215500 Phaseolus vulgaris HOM05D006913 ORTHO05D008720 1.1e-30 137.5 86 80.2
Cre07.g357350 Chlamydomonas reinhardtii HOM05D006913 ORTHO05D008720 3.3e-30 136.0 126 53.2
Hund09668 Selenicereus undatus HOM05D006913 ORTHO05D008720 1.3e-29 134.0 154 53.9
MCO04G045 Micromonas commoda HOM05D006913 ORTHO05D008720 8.2e-29 131.3 124 54.8
CARHR249910 Cardamine hirsuta HOM05D006913 ORTHO05D008720 1.3e-26 124.0 79 79.7
GSVIVG01010608001 Vitis vinifera HOM05D006913 ORTHO05D008720 2.5e-25 119.8 71 90.1
GSVIVG01037028001 Vitis vinifera HOM05D006913 ORTHO05D008720 2.5e-25 119.8 71 90.1
Eucgr.L01805 Eucalyptus grandis HOM05D006913 ORTHO05D008720 9.4e-25 117.9 83 73.5
Hma1.2p1_3252F.1_g334540 Hydrangea macrophylla HOM05D006913 ORTHO05D008720 4.7e-24 115.5 142 54.2
Nitab4.5_0001013g0020 Nicotiana tabacum HOM05D006913 ORTHO05D008720 1.0e-23 114.4 93 66.7
HPP92_027923 Vanilla planifolia HOM05D006913 ORTHO05D008720 1.3e-21 107.5 63 85.7
HPP92_027922 Vanilla planifolia HOM05D006913 ORTHO05D008720 1.1e-17 94.4 68 66.2
Haze_27360 Corylus avellana HOM05D006913 ORTHO05D008720 8.0e-16 88.2 109 39.4
C09p01450 Brassica napus HOM05D006913 ORTHO05D008720 2.5e-09 66.6 39 79.5
BolC9t53077H Brassica oleracea HOM05D006913 ORTHO05D008720 2.5e-09 66.6 39 79.5


User provided reference genes

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