Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1280.1 Capsicum annuum HOM05D002674 ORTHO05D007700 1.2e-187 660.2 500 100.0
PGSC0003DMG402017938 Solanum tuberosum HOM05D002674 ORTHO05D007700 7.6e-60 235.7 262 63.0
Sopen06g003880 Solanum pennellii HOM05D002674 ORTHO05D007700 3.8e-59 233.4 262 62.2
Solyc06g009120.3 Solanum lycopersicum HOM05D002674 ORTHO05D007700 1.1e-58 231.9 262 61.8
Nitab4.5_0002470g0100 Nicotiana tabacum HOM05D002674 ORTHO05D007700 4.6e-49 199.9 262 57.6
Nitab4.5_0005805g0020 Nicotiana tabacum HOM05D002674 ORTHO05D007700 6.0e-49 199.5 262 58.4
Peaxi162Scf00399g00714 Petunia axillaris HOM05D002674 ORTHO05D007700 3.4e-44 183.7 261 50.6
Lj1A25T5 Lonicera japonica HOM05D002674 ORTHO05D007700 3.2e-42 177.2 254 48.8
CSS0049735 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D007700 2.3e-40 171.0 247 51.4
Dinv33053 Davidia involucrata HOM05D002674 ORTHO05D007700 3.0e-40 170.6 267 44.2
Lsat_1_v5_gn_7_11800 Lactuca sativa HOM05D002674 ORTHO05D007700 2.5e-39 167.5 258 48.8
Atru.chr5.1151 Acer truncatum HOM05D002674 ORTHO05D007700 4.3e-39 166.8 242 46.7
Cc01_g20810 Coffea canephora HOM05D002674 ORTHO05D007700 4.3e-39 166.8 255 49.8
Lsat_1_v5_gn_9_5620 Lactuca sativa HOM05D002674 ORTHO05D007700 4.3e-39 166.8 256 49.2
TWI23G1032 Tripterygium wilfordii HOM05D002674 ORTHO05D007700 1.6e-38 164.9 248 46.0
Actinidia24347 Actinidia chinensis HOM05D002674 ORTHO05D007700 2.8e-38 164.1 242 47.9
HanXRQChr10g0284651 Helianthus annuus HOM05D002674 ORTHO05D007700 3.1e-37 160.6 267 46.4
Gohir.A08G075900 Gossypium hirsutum HOM05D002674 ORTHO05D007700 5.3e-37 159.8 254 43.7
Gohir.D08G085300 Gossypium hirsutum HOM05D002674 ORTHO05D007700 6.9e-37 159.5 254 43.7
Gorai.004G089800 Gossypium raimondii HOM05D002674 ORTHO05D007700 6.9e-37 159.5 254 43.7
Manes.01G218600 Manihot esculenta HOM05D002674 ORTHO05D007700 1.2e-36 158.7 245 48.6
TPR.G34010 Trifolium pratense HOM05D002674 ORTHO05D007700 1.5e-36 158.3 237 53.2
DCAR_002828 Daucus carota HOM05D002674 ORTHO05D007700 2.6e-36 157.5 260 51.9
MD11G1310500 Malus domestica HOM05D002674 ORTHO05D007700 4.5e-36 156.8 249 45.8
Prupe.8G261000 Prunus persica HOM05D002674 ORTHO05D007700 5.8e-36 156.4 257 44.4
ClCG10G010900 Citrullus lanatus HOM05D002674 ORTHO05D007700 1.3e-35 155.2 250 42.4
MELO3C017958.2 Cucumis melo HOM05D002674 ORTHO05D007700 1.7e-35 154.8 246 42.3
CsaV3_4G000780 Cucumis sativus L. HOM05D002674 ORTHO05D007700 1.7e-35 154.8 246 42.3
CANSAT25G1821 Cannabis sativa HOM05D002674 ORTHO05D007700 3.8e-35 153.7 251 43.0
Duzib138G1545 Durio zibethinus HOM05D002674 ORTHO05D007700 3.8e-35 153.7 253 44.7
Cfa005916 Carpinus fangiana HOM05D002674 ORTHO05D007700 4.9e-35 153.3 261 47.1
FAN27G2781 Fragaria x ananassa HOM05D002674 ORTHO05D007700 6.5e-35 152.9 246 43.5
MBI19_g25354_MAGBIO Magnolia biondii HOM05D002674 ORTHO05D007700 6.5e-35 152.9 254 46.9
COL.COLO4_23350 Corchorus olitorius HOM05D002674 ORTHO05D007700 8.4e-35 152.5 253 43.9
MD03G1287800 Malus domestica HOM05D002674 ORTHO05D007700 8.4e-35 152.5 259 43.2
Duzib133G1209 Durio zibethinus HOM05D002674 ORTHO05D007700 1.1e-34 152.1 253 44.3
Thecc.01G299900 Theobroma cacao HOM05D002674 ORTHO05D007700 1.1e-34 152.1 252 44.8
Ca_10339_v3 Cicer arietinum L. HOM05D002674 ORTHO05D007700 1.4e-34 151.8 238 47.5
Ciclev10021537m.g Citrus clementina HOM05D002674 ORTHO05D007700 1.4e-34 151.8 260 44.2
Psat6g166040 Pisum sativum HOM05D002674 ORTHO05D007700 4.2e-34 150.2 234 47.9
Sed0013149 Sechium edule HOM05D002674 ORTHO05D007700 5.5e-34 149.8 228 46.5
Glyma.02G018300 Glycine max HOM05D002674 ORTHO05D007700 7.1e-34 149.4 231 47.2
TAR365G1234 Trochodendron aralioides HOM05D002674 ORTHO05D007700 7.1e-34 149.4 260 41.9
RcHm_v2.0_Chr6g0293961 Rosa chinensis HOM05D002674 ORTHO05D007700 1.2e-33 148.7 248 48.0
CiPaw.07G108400 Carya illinoinensis HOM05D002674 ORTHO05D007700 1.8e-32 144.8 241 41.5
FvH4_2g25690 Fragaria vesca HOM05D002674 ORTHO05D007700 2.3e-32 144.4 252 47.2
Lj5g0010238 Lotus japonicus HOM05D002674 ORTHO05D007700 2.3e-32 144.4 249 44.6
FAN24G1157 Fragaria x ananassa HOM05D002674 ORTHO05D007700 3.0e-32 144.1 252 47.2
CSS0000533 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D007700 3.9e-32 143.7 256 46.9
Phvul.007G146100 Phaseolus vulgaris HOM05D002674 ORTHO05D007700 5.1e-32 143.3 243 43.6
QL12p028514 Quercus lobata HOM05D002674 ORTHO05D007700 8.7e-32 142.5 261 44.1
Rhsim01G0243300 Rhododendron simsii HOM05D002674 ORTHO05D007700 3.3e-31 140.6 257 39.7
FAN20G3185 Fragaria x ananassa HOM05D002674 ORTHO05D007700 7.4e-31 139.4 252 46.4
Migut.D00215 Erythranthe guttata HOM05D002674 ORTHO05D007700 1.3e-30 138.7 239 47.3
Glyma.10G018600 Glycine max HOM05D002674 ORTHO05D007700 1.3e-30 138.7 239 44.8
Medtr1g088580 Medicago truncatula HOM05D002674 ORTHO05D007700 1.3e-30 138.7 226 48.2
Potri.002G204700 Populus trichocarpa HOM05D002674 ORTHO05D007700 1.3e-30 138.7 246 43.5
VMungo0720G0138 Vigna mungo HOM05D002674 ORTHO05D007700 1.3e-30 138.7 251 43.0
EL10Ac7g17509 Beta vulgaris HOM05D002674 ORTHO05D007700 2.8e-30 137.5 270 42.2
PSO832G4034 Papaver somniferum HOM05D002674 ORTHO05D007700 4.8e-30 136.7 233 47.6
Potri.014G129500 Populus trichocarpa HOM05D002674 ORTHO05D007700 4.8e-30 136.7 245 45.3
FAN15G1012 Fragaria x ananassa HOM05D002674 ORTHO05D007700 6.3e-30 136.3 252 46.0
Sc24g0003790 Simmondsia chinensis HOM05D002674 ORTHO05D007700 1.1e-29 135.6 252 42.1
Eucgr.K03478 Eucalyptus grandis HOM05D002674 ORTHO05D007700 1.4e-29 135.2 249 43.8
Hma1.2p1_0491F.1_g164500 Hydrangea macrophylla HOM05D002674 ORTHO05D007700 4.1e-29 133.7 183 51.4
Sabra14G0096100 Salix brachista HOM05D002674 ORTHO05D007700 4.1e-29 133.7 242 43.4
SGA_v2.0_scaffold1G00369 Striga asiatica HOM05D002674 ORTHO05D007700 4.1e-29 133.7 247 42.9
Lalb_Chr06g0163511 Lupinus albus HOM05D002674 ORTHO05D007700 6.9e-29 132.9 232 47.4
Aqoxy5G00752 Aquilegia oxysepala HOM05D002674 ORTHO05D007700 4.5e-28 130.2 261 41.0
Oeu054122.1 Olea europaea HOM05D002674 ORTHO05D007700 4.5e-28 130.2 176 51.1
Ah.15g093240 Amaranthus hybridus HOM05D002674 ORTHO05D007700 7.6e-28 129.4 269 41.3
Nn3g21481 Nelumbo nucifera HOM05D002674 ORTHO05D007700 1.0e-27 129.0 222 42.3
AT4G02425 Arabidopsis thaliana HOM05D002674 ORTHO05D007700 1.3e-27 128.6 272 41.2
arahy.Tifrunner.gnm1.ann1.YN8C8B Arachis hypogaea HOM05D002674 ORTHO05D007700 1.3e-27 128.6 246 45.9
Sabra02G0154700 Salix brachista HOM05D002674 ORTHO05D008110 1.7e-27 128.3 234 44.9
Hund18157 Selenicereus undatus HOM05D002674 ORTHO05D007700 2.2e-27 127.9 252 44.8
unitig_22.g5241 Utricularia gibba HOM05D002674 ORTHO05D007700 2.2e-27 127.9 230 45.2
Carub.0006s3472 Capsella rubella HOM05D002674 ORTHO05D007700 3.8e-27 127.1 252 41.3
arahy.Tifrunner.gnm1.ann1.2P60TQ Arachis hypogaea HOM05D002674 ORTHO05D007700 5.0e-27 126.7 250 41.2
HPP92_025205 Vanilla planifolia HOM05D002674 ORTHO05D007700 6.5e-27 126.3 254 39.4
CARHR250690 Cardamine hirsuta HOM05D002674 ORTHO05D007700 1.1e-26 125.6 267 40.8
CDE11G0633 Ceratophyllum demersum HOM05D002674 ORTHO05D007700 1.1e-26 125.6 268 40.7
Sp6g02330 Schrenkiella parvula HOM05D002674 ORTHO05D007700 1.9e-26 124.8 257 40.5
Oeu053149.1 Olea europaea HOM05D002674 ORTHO05D007700 2.5e-26 124.4 176 55.7
Thhalv10028893m.g Eutrema salsugineum HOM05D002674 ORTHO05D007700 7.2e-26 122.9 262 41.6
THA.LOC104815928 Tarenaya hassleriana HOM05D002674 ORTHO05D007700 2.1e-25 121.3 246 45.5
TAR636G1278 Trochodendron aralioides HOM05D002674 ORTHO05D007700 3.5e-25 120.6 260 37.7
AL6G50650 Arabidopsis lyrata HOM05D002674 ORTHO05D007700 5.1e-24 116.7 238 42.0
CDE05G2513 Ceratophyllum demersum HOM05D002674 ORTHO05D007700 6.7e-24 116.3 267 39.7
vmacro15007 Vaccinium macrocarpon HOM05D002674 ORTHO05D007700 8.7e-24 115.9 255 39.2
C02p38980 Brassica napus HOM05D002674 ORTHO05D007700 4.3e-23 113.6 274 38.7
BcaC03g16124 Brassica carinata HOM05D002674 ORTHO05D007700 5.7e-23 113.2 273 38.5
BolC2t09909H Brassica oleracea HOM05D002674 ORTHO05D007700 5.7e-23 113.2 274 38.7
A02p24720 Brassica napus HOM05D002674 ORTHO05D007700 2.2e-22 111.3 271 38.4
BraA02t07459Z Brassica rapa HOM05D002674 ORTHO05D007700 6.3e-22 109.8 274 37.6
Aa31LG1G9740 Aethionema arabicum HOM05D002674 ORTHO05D007700 8.2e-22 109.4 283 37.8
THA.LOC104825970 Tarenaya hassleriana HOM05D002674 ORTHO05D007700 2.4e-21 107.8 251 39.8
BcaB05g23628 Brassica carinata HOM05D002674 ORTHO05D007700 4.5e-20 103.6 217 42.4
AUR62033139 Chenopodium quinoa HOM05D002674 ORTHO05D007700 5.9e-20 103.2 183 45.4
ECA247G3124 Erigeron canadensis HOM05D002674 ORTHO05D007700 1.0e-19 102.4 244 39.8
AUR62008632 Chenopodium quinoa HOM05D002674 ORTHO05D007700 1.2e-17 95.5 152 48.7
Carub.0001s0195 Capsella rubella HOM05D002674 ORTHO05D007700 2.7e-17 94.4 255 38.8
SEGI_12569 Sequoiadendron giganteum HOM05D002674 ORTHO05D007700 1.7e-14 85.1 260 34.6
Hma1.2p1_0491F.1_g164510 Hydrangea macrophylla HOM05D002674 ORTHO05D007700 2.8e-14 84.3 59 79.7
Aa31LG5G2060 Aethionema arabicum HOM05D002674 ORTHO05D007700 6.9e-13 79.7 255 33.3
ATR0796G100 Amborella trichopoda HOM05D002674 ORTHO05D007700 1.0e-11 75.9 247 32.8
HPP92_006921 Vanilla planifolia HOM05D002674 ORTHO05D007700 1.4e-10 72.0 237 32.5
BolC6t36475H Brassica oleracea HOM05D000186 ORTHO05D015008 1.8e-08 65.1 53 56.6
CANSAT56G3445 Cannabis sativa HOM05D002674 ORTHO05D007700 5.1e-08 63.5 111 37.8
BcaC03g16430 Brassica carinata HOM05D002674 ORTHO05D007700 8.8e-08 62.8 49 57.1
C02p62500 Brassica napus HOM05D002674 ORTHO05D007700 1.1e-07 62.4 60 51.7
C08p25960 Brassica napus HOM05D002674 ORTHO05D007700 1.1e-07 62.4 60 51.7
C05p48610 Brassica napus HOM05D002674 ORTHO05D007700 2.6e-07 61.2 60 50.0
BcaB04g18179 Brassica carinata HOM05D002674 ORTHO05D007700 4.4e-07 60.5 44 63.6
BolC9t55650H Brassica oleracea HOM05D002674 ORTHO05D007700 4.4e-07 60.5 59 50.8
BolC1t01853H Brassica oleracea HOM05D002674 ORTHO05D007700 5.7e-07 60.1 58 51.7
C02p42550 Brassica napus HOM05D000186 ORTHO05D015008 1.7e-06 58.5 43 58.1
A08p09760 Brassica napus HOM05D002674 ORTHO05D007700 4.8e-06 57.0 40 60.0
BraA08t32971Z Brassica rapa HOM05D002674 ORTHO05D007700 4.8e-06 57.0 40 60.0
C09p27860 Brassica napus HOM05D002674 ORTHO05D007700 8.2e-06 56.2 55 50.9


User provided reference genes

Program Settings