Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G128.73 Capsicum annuum HOM05D004518 ORTHO05D005434 1.5e-153 546.2 278 100.0
Peaxi162Scf00696g00027 Petunia axillaris HOM05D004518 ORTHO05D005434 5.2e-127 458.0 241 94.2
PGSC0003DMG400023695 Solanum tuberosum HOM05D004518 ORTHO05D005434 7.5e-126 454.1 240 93.3
Sopen10g031320 Solanum pennellii HOM05D004518 ORTHO05D005434 1.3e-125 453.4 240 93.3
Solyc10g080810.2 Solanum lycopersicum HOM05D004518 ORTHO05D005434 4.1e-124 448.4 240 92.1
Nitab4.5_0001173g0020 Nicotiana tabacum HOM05D004518 ORTHO05D005434 8.3e-117 424.1 228 91.2
Dinv05720 Davidia involucrata HOM05D004518 ORTHO05D005434 4.3e-105 385.2 241 78.4
Cc06_g19630 Coffea canephora HOM05D004518 ORTHO05D005434 1.6e-104 383.3 237 78.5
Dinv03206 Davidia involucrata HOM05D004518 ORTHO05D005434 1.7e-101 373.2 236 79.2
Actinidia06430 Actinidia chinensis HOM05D004518 ORTHO05D005434 1.1e-100 370.5 241 76.3
CSS0002759 Camellia sinensis var. sinensis HOM05D004518 ORTHO05D005434 3.2e-100 369.0 241 75.5
CSS0023469 Camellia sinensis var. sinensis HOM05D004518 ORTHO05D005434 3.2e-100 369.0 241 75.5
Hma1.2p1_0252F.1_g102810 Hydrangea macrophylla HOM05D004518 ORTHO05D005434 5.4e-100 368.2 239 75.7
Rhsim07G0181600 Rhododendron simsii HOM05D004518 ORTHO05D005434 1.5e-97 360.1 237 74.3
SGA_v2.0_scaffold69G23161 Striga asiatica HOM05D004518 ORTHO05D005434 1.5e-97 360.1 241 73.4
Oeu063781.2 Olea europaea HOM05D004518 ORTHO05D005434 2.5e-97 359.4 240 73.3
Thecc.05G127700 Theobroma cacao HOM05D004518 ORTHO05D005434 7.3e-97 357.8 239 74.1
COL.COLO4_07077 Corchorus olitorius HOM05D004518 ORTHO05D005434 2.1e-96 356.3 239 74.1
GSVIVG01025741001 Vitis vinifera HOM05D004518 ORTHO05D005434 8.1e-96 354.4 241 72.2
Duzib128G0186 Durio zibethinus HOM05D004518 ORTHO05D005434 1.1e-95 354.0 242 71.9
Migut.J01644 Erythranthe guttata HOM05D004518 ORTHO05D005434 1.1e-95 354.0 241 72.2
Duzib106G1523 Durio zibethinus HOM05D004518 ORTHO05D005434 3.1e-95 352.4 239 72.0
Gohir.D13G001500 Gossypium hirsutum HOM05D004518 ORTHO05D005434 3.1e-95 352.4 239 73.2
Gorai.013G001400 Gossypium raimondii HOM05D004518 ORTHO05D005434 3.1e-95 352.4 239 73.2
PGR031G0872 Punica granatum HOM05D004518 ORTHO05D005434 3.1e-95 352.4 238 71.0
Atru.chr1.1396 Acer truncatum HOM05D004518 ORTHO05D005434 4.0e-95 352.1 239 71.5
CANSAT64G1638 Cannabis sativa HOM05D004518 ORTHO05D005434 6.9e-95 351.3 239 74.1
Cfa019996 Carpinus fangiana HOM05D004518 ORTHO05D005434 6.9e-95 351.3 239 72.0
QL07p011297 Quercus lobata HOM05D004518 ORTHO05D005434 3.4e-94 349.0 289 63.3
Aqoxy2G00434 Aquilegia oxysepala HOM05D004518 ORTHO05D005434 9.9e-94 347.4 248 69.0
Oeu022968.1 Olea europaea HOM05D004518 ORTHO05D005434 1.3e-93 347.1 237 71.3
Peaxi162Scf00076g00330 Petunia axillaris HOM05D004518 ORTHO05D005434 1.3e-93 347.1 232 77.6
Manes.09G003700 Manihot esculenta HOM05D004518 ORTHO05D005434 2.9e-93 345.9 238 71.8
ClCG10G013700 Citrullus lanatus HOM05D004518 ORTHO05D005434 3.8e-93 345.5 239 70.7
AT3G56740 Arabidopsis thaliana HOM05D004518 ORTHO05D005434 6.4e-93 344.7 241 71.4
TWI53G0703 Tripterygium wilfordii HOM05D004518 ORTHO05D005434 8.4e-93 344.4 239 71.1
Sed0000448 Sechium edule HOM05D004518 ORTHO05D005434 1.9e-92 343.2 239 69.5
MD14G1089500 Malus domestica HOM05D004518 ORTHO05D005434 2.4e-92 342.8 239 69.5
CsaV3_3G042950 Cucumis sativus L. HOM05D004518 ORTHO05D005434 3.2e-92 342.4 239 70.7
PSO339G3176 Papaver somniferum HOM05D004518 ORTHO05D005434 3.2e-92 342.4 239 72.4
Haze_20236 Corylus avellana HOM05D002003 ORTHO05D005434 4.2e-92 342.0 238 70.2
Thhalv10006131m.g Eutrema salsugineum HOM05D004518 ORTHO05D005434 4.2e-92 342.0 241 71.0
Lsat_1_v5_gn_9_30021 Lactuca sativa HOM05D004518 ORTHO05D005434 4.2e-92 342.0 241 71.8
AL5G38100 Arabidopsis lyrata HOM05D004518 ORTHO05D005434 5.4e-92 341.7 241 71.0
MD12G1096200 Malus domestica HOM05D004518 ORTHO05D005434 5.4e-92 341.7 242 69.8
TWI74G1405 Tripterygium wilfordii HOM05D004518 ORTHO05D005434 9.3e-92 340.9 240 71.7
Carub.0005s2348 Capsella rubella HOM05D004518 ORTHO05D005434 1.2e-91 340.5 241 70.5
MELO3C026597.2 Cucumis melo HOM05D004518 ORTHO05D005434 1.2e-91 340.5 239 70.3
MSTRG.19796 Avicennia marina HOM05D004518 ORTHO05D005434 2.1e-91 339.7 221 75.6
CiPaw.10G040700 Carya illinoinensis HOM05D004518 ORTHO05D005434 2.7e-91 339.3 239 70.7
ECA247G2040 Erigeron canadensis HOM05D004518 ORTHO05D005434 2.7e-91 339.3 241 71.4
HanXRQChr10g0292841 Helianthus annuus HOM05D004518 ORTHO05D005434 2.7e-91 339.3 241 71.0
RcHm_v2.0_Chr2g0125741 Rosa chinensis HOM05D004518 ORTHO05D005434 2.7e-91 339.3 239 69.5
PSO384G3583 Papaver somniferum HOM05D004518 ORTHO05D005434 3.5e-91 339.0 239 72.8
Medtr7g089550 Medicago truncatula HOM05D004518 ORTHO05D005434 4.6e-91 338.6 239 71.1
Glyma.19G129500 Glycine max HOM05D004518 ORTHO05D005434 6.0e-91 338.2 239 71.1
CiPaw.09G048700 Carya illinoinensis HOM05D004518 ORTHO05D005434 1.3e-90 337.0 239 68.6
unitig_744.g24180 Utricularia gibba HOM05D004518 ORTHO05D005434 1.8e-90 336.7 241 69.7
Prupe.7G034400 Prunus persica HOM05D004518 ORTHO05D005434 2.3e-90 336.3 239 69.9
THA.LOC104803258 Tarenaya hassleriana HOM05D004518 ORTHO05D005434 2.3e-90 336.3 249 69.1
Lalb_Chr14g0365751 Lupinus albus HOM05D004518 ORTHO05D005434 3.0e-90 335.9 239 69.5
EL10Ac3g07249 Beta vulgaris HOM05D004518 ORTHO05D005434 6.7e-90 334.7 236 69.1
Potri.006G040100 Populus trichocarpa HOM05D004518 ORTHO05D005434 8.7e-90 334.3 239 68.2
CARHR166870 Cardamine hirsuta HOM05D004518 ORTHO05D005434 1.1e-89 334.0 241 69.3
FAN05G1433 Fragaria x ananassa HOM05D004518 ORTHO05D005434 1.1e-89 334.0 239 68.2
arahy.Tifrunner.gnm1.ann1.5HY1FK Arachis hypogaea HOM05D004518 ORTHO05D005434 1.5e-89 333.6 255 66.3
Sp5g05830 Schrenkiella parvula HOM05D004518 ORTHO05D005434 1.5e-89 333.6 241 68.9
SGA_v2.0_scaffold66G22264 Striga asiatica HOM05D004518 ORTHO05D005434 1.9e-89 333.2 232 74.1
Ciclev10012184m.g Citrus clementina HOM05D004518 ORTHO05D005434 2.5e-89 332.8 233 70.8
Glyma.03G126400 Glycine max HOM05D004518 ORTHO05D005434 2.5e-89 332.8 239 70.3
FvH4_6g25340 Fragaria vesca HOM05D004518 ORTHO05D005434 4.3e-89 332.0 239 67.8
Aa31LG10G11580 Aethionema arabicum HOM05D004518 ORTHO05D005434 5.6e-89 331.6 230 71.7
MBI19_g14619_MAGBIO Magnolia biondii HOM05D004518 ORTHO05D005434 7.4e-89 331.3 250 70.0
FAN02G2919 Fragaria x ananassa HOM05D004518 ORTHO05D005434 9.6e-89 330.9 239 67.8
Lj1g0025115 Lotus japonicus HOM05D004518 ORTHO05D005434 9.6e-89 330.9 239 68.6
Phvul.001G121800 Phaseolus vulgaris HOM05D004518 ORTHO05D005434 1.3e-88 330.5 240 68.3
VMungo1383G1992 Vigna mungo HOM05D004518 ORTHO05D005434 1.3e-88 330.5 241 67.6
BcaC07g40121 Brassica carinata HOM05D004518 ORTHO05D005434 2.1e-88 329.7 241 68.9
A09p49580 Brassica napus HOM05D004518 ORTHO05D005434 2.1e-88 329.7 243 68.7
BraA09t40411Z Brassica rapa HOM05D004518 ORTHO05D005434 2.1e-88 329.7 243 68.7
THA.LOC104824396 Tarenaya hassleriana HOM05D004518 ORTHO05D005434 2.8e-88 329.3 239 69.0
TAR623G1611 Trochodendron aralioides HOM05D004518 ORTHO05D005434 3.7e-88 328.9 236 70.8
TWI77G0289 Tripterygium wilfordii HOM05D004518 ORTHO05D005434 4.8e-88 328.6 239 69.5
Sed0017951 Sechium edule HOM05D004518 ORTHO05D005434 8.1e-88 327.8 236 68.6
Eucgr.A02232 Eucalyptus grandis HOM05D004518 ORTHO05D005434 1.1e-87 327.4 238 66.4
BolC8t50814H Brassica oleracea HOM05D004518 ORTHO05D005434 9.0e-87 324.3 243 68.3
Lalb_Chr24g0400371 Lupinus albus HOM05D004518 ORTHO05D005434 9.0e-87 324.3 239 68.6
BcaC07g39982 Brassica carinata HOM05D004518 ORTHO05D005434 1.5e-86 323.6 241 68.9
MBI13_g09215_MAGBIO Magnolia biondii HOM05D004518 ORTHO05D005434 2.0e-86 323.2 240 69.2
Nn7g36811 Nelumbo nucifera HOM05D004518 ORTHO05D005434 2.0e-86 323.2 239 68.2
FAN09G3120 Fragaria x ananassa HOM05D004518 ORTHO05D005434 4.5e-86 322.0 265 61.5
Thhalv10017035m.g Eutrema salsugineum HOM05D004518 ORTHO05D005434 2.9e-85 319.3 227 71.4
unitig_21.g20688 Utricularia gibba HOM05D004518 ORTHO05D005434 2.9e-85 319.3 239 66.1
Sp4g23460 Schrenkiella parvula HOM05D004518 ORTHO05D005434 1.4e-84 317.0 215 72.6
Sc13g0001070 Simmondsia chinensis HOM05D004518 ORTHO05D005434 2.5e-84 316.2 204 77.0
C08p31960 Brassica napus HOM05D004518 ORTHO05D005434 3.5e-83 312.4 237 67.5
Aa31LG3G900 Aethionema arabicum HOM05D004518 ORTHO05D005434 4.6e-83 312.0 262 63.0
Eucgr.K01645 Eucalyptus grandis HOM05D004518 ORTHO05D005434 1.8e-82 310.1 238 66.0
Aa31LG3G910 Aethionema arabicum HOM05D004518 ORTHO05D005434 3.0e-82 309.3 241 66.0
CARHR136250 Cardamine hirsuta HOM05D004518 ORTHO05D005434 2.5e-81 306.2 227 68.3
BraA05t19203Z Brassica rapa HOM05D004518 ORTHO05D005434 5.6e-81 305.1 230 68.3
AL4G39130 Arabidopsis lyrata HOM05D004518 ORTHO05D005434 9.6e-81 304.3 227 67.8
AT2G41160 Arabidopsis thaliana HOM05D004518 ORTHO05D005434 3.7e-80 302.4 227 67.0
Carub.0004s2347 Capsella rubella HOM05D004518 ORTHO05D005434 1.5e-78 297.0 227 66.1
HPP92_018980 Vanilla planifolia HOM05D004518 ORTHO05D005434 1.5e-78 297.0 239 62.8
vmacro05025 Vaccinium macrocarpon HOM05D004518 ORTHO05D005434 2.6e-78 296.2 201 73.1
Gohir.A13G002100 Gossypium hirsutum HOM05D004518 ORTHO05D005434 4.5e-78 295.4 238 64.3
BolC4t21891H Brassica oleracea HOM05D004518 ORTHO05D005434 1.7e-77 293.5 231 66.2
Psat3g079720 Pisum sativum HOM05D004518 ORTHO05D005434 2.2e-77 293.1 196 74.0
Potri.016G035800 Populus trichocarpa HOM05D004518 ORTHO05D005434 1.9e-76 290.0 239 63.2
CDE08G0004 Ceratophyllum demersum HOM05D004518 ORTHO05D005434 9.3e-76 287.7 240 62.1
A05p02070 Brassica napus HOM05D004518 ORTHO05D005434 1.2e-75 287.3 222 66.7
C04p02460 Brassica napus HOM05D004518 ORTHO05D005434 3.0e-74 282.7 223 65.9
BcaC02g12756 Brassica carinata HOM05D004518 ORTHO05D005434 3.9e-74 282.3 272 57.4
Zm00001eb128690 Zea mays HOM05D004518 ORTHO05D005434 1.5e-73 280.4 240 59.6
CDE08G0582 Ceratophyllum demersum HOM05D004518 ORTHO05D005434 5.7e-73 278.5 214 66.8
Os01g0268800 Oryza sativa ssp. japonica HOM05D004518 ORTHO05D005434 2.4e-71 273.1 240 60.8
Mapoly0023s0107 Marchantia polymorpha HOM05D004518 ORTHO05D005434 1.7e-69 266.9 231 57.6
SMO364G0164 Selaginella moellendorffii HOM05D004518 ORTHO05D005434 6.5e-69 265.0 248 54.0
AagrBONN_evm.TU.Sc2ySwM_344.4495 Anthoceros agrestis HOM05D004518 ORTHO05D005434 9.4e-68 261.2 238 55.9
Pp3c15_13440 Physcomitrium patens HOM05D004518 ORTHO05D005434 7.4e-65 251.5 232 53.9
Hund24582 Selenicereus undatus HOM05D004518 ORTHO05D005434 4.5e-62 242.3 229 58.1
arahy.Tifrunner.gnm1.ann1.CJ2XLM Arachis hypogaea HOM05D004518 ORTHO05D005434 2.9e-61 239.6 165 71.5
Zm00001eb150410 Zea mays HOM05D004518 ORTHO05D005434 6.5e-61 238.4 196 62.2
Os01g0806000 Oryza sativa ssp. japonica HOM05D004518 ORTHO05D005434 3.2e-60 236.1 201 62.2
SHI48963 Sapria himalayana HOM05D004518 ORTHO05D005434 4.2e-60 235.7 274 49.3
Pp3c9_17200 Physcomitrium patens HOM05D004518 ORTHO05D005434 5.5e-60 235.3 214 55.6
Hund19087 Selenicereus undatus HOM05D004518 ORTHO05D005434 1.6e-59 233.8 238 52.9
AUR62030305 Chenopodium quinoa HOM05D004518 ORTHO05D005434 7.9e-59 231.5 236 52.5
Lj2A402T37 Lonicera japonica HOM05D004518 ORTHO05D005434 2.0e-57 226.9 179 68.7
AUR62018357 Chenopodium quinoa HOM05D004518 ORTHO05D005434 9.7e-57 224.6 236 52.1
HPP92_001027 Vanilla planifolia HOM05D004518 ORTHO05D005434 9.7e-57 224.6 212 56.1
Actinidia22259 Actinidia chinensis HOM05D004518 ORTHO05D005434 1.7e-56 223.8 158 71.5
Sabra06G0027100 Salix brachista HOM05D004518 ORTHO05D005434 3.6e-51 206.1 218 55.5
Lj1A1090G38 Lonicera japonica HOM05D004518 ORTHO05D005434 2.6e-49 199.9 205 54.1
DCAR_020579 Daucus carota HOM05D004518 ORTHO05D005434 4.4e-49 199.1 153 69.3
ATR0307G082 Amborella trichopoda HOM05D004518 ORTHO05D005434 5.7e-49 198.7 151 66.2
Aqoxy2G02076 Aquilegia oxysepala HOM05D004518 ORTHO05D005434 1.3e-48 197.6 148 64.9
TPR.G16082 Trifolium pratense HOM05D002003 ORTHO05D002037 1.7e-48 197.2 151 66.9
CBR_g11167 Chara braunii HOM05D004518 ORTHO05D005434 3.7e-48 196.1 204 48.0
CBR_g18715 Chara braunii HOM05D004518 ORTHO05D005434 3.8e-45 186.0 214 46.3
SGA_v2.0_scaffold66G22363 Striga asiatica HOM05D004518 ORTHO05D005434 3.8e-45 186.0 275 42.9
Pp3c26_11360 Physcomitrium patens HOM05D004518 ORTHO05D005434 2.1e-43 180.3 253 40.3
CDE02G2541 Ceratophyllum demersum HOM05D002603 ORTHO05D002907 4.7e-43 179.1 213 47.9
Cpa.g.sc92.78 Carica papaya HOM05D004518 ORTHO05D005434 8.0e-43 178.3 127 67.7
MSTRG.5996 Avicennia marina HOM05D004518 ORTHO05D005434 8.0e-35 151.8 90 78.9
TPR.G27640 Trifolium pratense HOM05D004518 ORTHO05D005434 1.4e-31 141.0 101 70.3
SEGI_26369 Sequoiadendron giganteum HOM05D004518 ORTHO05D005434 8.6e-29 131.7 82 72.0
Cre08.g386050 Chlamydomonas reinhardtii HOM05D004518 ORTHO05D005434 1.3e-24 117.9 218 35.3
Dinv05308 Davidia involucrata HOM05D004518 ORTHO05D005434 4.0e-18 96.3 60 71.7
BolC4t21949H Brassica oleracea HOM05D004518 ORTHO05D005434 1.5e-17 94.4 129 47.3
C04p03070 Brassica napus HOM05D004518 ORTHO05D005434 9.8e-17 91.7 148 41.9
PGSC0003DMG400012448 Solanum tuberosum HOM05D004518 ORTHO05D005434 8.3e-16 88.6 42 95.2
PGSC0003DMG400010553 Solanum tuberosum HOM05D004518 ORTHO05D005434 1.6e-14 84.3 40 95.0
MBI19_g45264_MAGBIO Magnolia biondii HOM05D004518 ORTHO05D005434 5.6e-12 75.9 142 41.5
MCO13G544 Micromonas commoda HOM05D004518 ORTHO05D005434 6.2e-11 72.4 198 28.3
PGSC0003DMG400013156 Solanum tuberosum HOM05D000197 ORTHO05D000114 4.9e-08 62.8 34 82.4


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