Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1279.4 Capsicum annuum HOM05D004064 ORTHO05D009561 7.8e-49 196.8 100 100.0
CAN.G83.8 Capsicum annuum HOM05D004064 ORTHO05D009561 7.1e-42 173.7 100 89.0
PGSC0003DMG400014991 Solanum tuberosum HOM05D004064 ORTHO05D009561 1.0e-32 143.3 100 71.0
PGSC0003DMG400017950 Solanum tuberosum HOM05D004064 ORTHO05D009561 4.0e-29 131.3 99 67.7
CAN.G391.3 Capsicum annuum HOM05D004064 ORTHO05D009561 1.1e-26 123.2 97 66.0
CAN.G630.48 Capsicum annuum HOM05D004064 ORTHO05D009561 2.7e-25 118.6 84 70.2
Sopen02g010180 Solanum pennellii HOM05D000017 ORTHO05D009909 1.3e-24 116.3 78 71.8
PGSC0003DMG400031418 Solanum tuberosum HOM05D004064 ORTHO05D009561 1.3e-24 116.3 84 66.7
Sopen03g017620 Solanum pennellii HOM05D004064 ORTHO05D009561 3.9e-24 114.8 96 60.4
CAN.G293.7 Capsicum annuum HOM05D004064 ORTHO05D009561 2.6e-20 102.1 95 63.2
PGSC0003DMG400025344 Solanum tuberosum HOM05D004064 ORTHO05D009561 6.4e-19 97.4 74 63.5
CAN.G1740.2 Capsicum annuum HOM05D004064 ORTHO05D009561 1.9e-18 95.9 81 64.2
Sopen01g016940 Solanum pennellii HOM05D004064 ORTHO05D009909 4.2e-18 94.7 84 57.1
PGSC0003DMG400043277 Solanum tuberosum HOM05D004064 ORTHO05D009909 4.2e-18 94.7 56 75.0
CAN.G2.10 Capsicum annuum HOM05D004064 ORTHO05D009561 4.6e-17 91.3 48 91.7
PGSC0003DMG400012698 Solanum tuberosum HOM05D004064 ORTHO05D009909 5.1e-16 87.8 66 63.6
Nitab4.5_0003892g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009561 1.9e-15 85.9 97 51.5
CAN.G321.28 Capsicum annuum HOM05D004064 ORTHO05D009909 2.5e-15 85.5 53 79.2
PGSC0003DMG400046188 Solanum tuberosum HOM05D004064 ORTHO05D011910 2.5e-15 85.5 99 49.5
Nitab4.5_0007351g0040 Nicotiana tabacum HOM05D004064 ORTHO05D009909 4.3e-15 84.7 98 49.0
Nitab4.5_0008390g0050 Nicotiana tabacum HOM05D004064 ORTHO05D009561 4.3e-15 84.7 84 54.8
Sopen02g014660 Solanum pennellii HOM05D000017 ORTHO05D011910 4.3e-15 84.7 99 48.5
Sopen04g015180 Solanum pennellii HOM05D000004 ORTHO05D011910 4.3e-15 84.7 99 48.5
Sopen05g004820 Solanum pennellii HOM05D000072 ORTHO05D011910 4.3e-15 84.7 99 48.5
Sopen08g008550 Solanum pennellii HOM05D004064 ORTHO05D011910 4.3e-15 84.7 99 48.5
Sopen09g011110 Solanum pennellii HOM05D000017 ORTHO05D011910 5.6e-15 84.3 99 48.5
Sopen11g024710 Solanum pennellii HOM05D000002 ORTHO05D000001 7.4e-15 84.0 99 48.5
PGSC0003DMG400039926 Solanum tuberosum HOM05D004064 ORTHO05D011910 7.4e-15 84.0 97 49.5
Nitab4.5_0002311g0030 Nicotiana tabacum HOM05D004064 ORTHO05D009909 9.6e-15 83.6 101 48.5
Sopen01g020720 Solanum pennellii HOM05D004064 ORTHO05D011910 9.6e-15 83.6 99 48.5
Sopen02g009320 Solanum pennellii HOM05D000017 ORTHO05D011910 9.6e-15 83.6 99 47.5
Nitab4.5_0001499g0080 Nicotiana tabacum HOM05D004064 ORTHO05D009561 1.3e-14 83.2 101 47.5
Sopen04g022370 Solanum pennellii HOM05D000017 ORTHO05D011910 2.1e-14 82.4 99 47.5
Sopen08g005960 Solanum pennellii HOM05D004064 ORTHO05D011910 2.1e-14 82.4 99 47.5
Sopen05g016400 Solanum pennellii HOM05D000017 ORTHO05D011910 3.7e-14 81.6 99 47.5
Nitab4.5_0001461g0090 Nicotiana tabacum HOM05D004064 ORTHO05D009561 4.8e-14 81.3 77 54.5
Nitab4.5_0002581g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 6.2e-14 80.9 97 48.5
Peaxi162Scf00375g00430 Petunia axillaris HOM05D004064 ORTHO05D009561 1.1e-13 80.1 100 41.0
Sopen05g014940 Solanum pennellii HOM05D004064 ORTHO05D009909 1.1e-13 80.1 59 59.3
Nitab4.5_0001023g0170 Nicotiana tabacum HOM05D004064 ORTHO05D009561 1.4e-13 79.7 97 47.4
Solyc07g042497.1 Solanum lycopersicum HOM05D004064 ORTHO05D011910 1.8e-13 79.3 99 46.5
Sopen09g015000 Solanum pennellii HOM05D004064 ORTHO05D009909 1.8e-13 79.3 44 84.1
CAN.G548.9 Capsicum annuum HOM05D004064 ORTHO05D009561 2.4e-13 79.0 53 73.6
Nitab4.5_0005665g0070 Nicotiana tabacum HOM05D004064 ORTHO05D009909 3.1e-13 78.6 97 47.4
Sopen10g005830 Solanum pennellii HOM05D000017 ORTHO05D011910 9.0e-13 77.0 96 46.9
Peaxi162Scf00566g00021 Petunia axillaris HOM05D004064 ORTHO05D009561 2.0e-12 75.9 100 39.0
Peaxi162Scf00031g02423 Petunia axillaris HOM05D000017 ORTHO05D009561 3.4e-12 75.1 101 40.6
PGSC0003DMG400001253 Solanum tuberosum HOM05D004064 ORTHO05D009561 5.8e-12 74.3 63 60.3
Nitab4.5_0002845g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009561 7.6e-12 73.9 97 45.4
Sopen05g002620 Solanum pennellii HOM05D000017 ORTHO05D011910 1.3e-11 73.2 99 46.5
Nitab4.5_0004504g0070 Nicotiana tabacum HOM05D004064 ORTHO05D009561 1.7e-11 72.8 97 45.4
Solyc05g039910.1 Solanum lycopersicum HOM05D004064 ORTHO05D009561 1.7e-11 72.8 71 57.7
Sopen04g011640 Solanum pennellii HOM05D004064 ORTHO05D009909 1.7e-11 72.8 82 48.8
Sopen09g015990 Solanum pennellii HOM05D000017 ORTHO05D000013 6.5e-11 70.9 102 36.3
Sopen12g005860 Solanum pennellii HOM05D000017 ORTHO05D000013 8.4e-11 70.5 102 35.3
Sopen10g027270 Solanum pennellii HOM05D004064 ORTHO05D009909 1.1e-10 70.1 55 60.0
CAN.G257.9 Capsicum annuum HOM05D004064 ORTHO05D009561 1.4e-10 69.7 73 46.6
Sopen07g007160 Solanum pennellii HOM05D000017 ORTHO05D000013 1.4e-10 69.7 68 52.9
Sopen11g013980 Solanum pennellii HOM05D000017 ORTHO05D009561 1.9e-10 69.3 102 35.3
Sopen05g012450 Solanum pennellii HOM05D000017 ORTHO05D009561 2.5e-10 68.9 102 34.3
Sopen08g001370 Solanum pennellii HOM05D000017 ORTHO05D000013 2.5e-10 68.9 102 34.3
Sopen09g011090 Solanum pennellii HOM05D000017 ORTHO05D009561 2.5e-10 68.9 102 34.3
Sopen11g012650 Solanum pennellii HOM05D000017 ORTHO05D009561 2.5e-10 68.9 102 34.3
Sopen11g026090 Solanum pennellii HOM05D000017 ORTHO05D000013 2.5e-10 68.9 102 34.3
Sopen06g017430 Solanum pennellii HOM05D000017 ORTHO05D000013 7.1e-10 67.4 102 33.3
Peaxi162Scf00553g00217 Petunia axillaris HOM05D004064 ORTHO05D009561 9.3e-10 67.0 108 38.0
Peaxi162Scf00033g00082 Petunia axillaris HOM05D004064 ORTHO05D009561 1.2e-09 66.6 92 39.1
Sopen01g018580 Solanum pennellii HOM05D004064 ORTHO05D009561 1.2e-09 66.6 99 36.4
Sopen10g017570 Solanum pennellii HOM05D000017 ORTHO05D009561 1.2e-09 66.6 102 34.3
Sopen02g010790 Solanum pennellii HOM05D000017 ORTHO05D009561 1.6e-09 66.2 99 35.4
Nitab4.5_0001547g0070 Nicotiana tabacum HOM05D004064 ORTHO05D009561 2.1e-09 65.9 85 45.9
Peaxi162Scf00004g00458 Petunia axillaris HOM05D004064 ORTHO05D009561 2.1e-09 65.9 87 39.1
Sopen01g010980 Solanum pennellii HOM05D000017 ORTHO05D009561 2.1e-09 65.9 102 33.3
Sopen10g011860 Solanum pennellii HOM05D004064 ORTHO05D009561 2.1e-09 65.9 103 34.0
Nitab4.5_0021453g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 3.5e-09 65.1 98 40.8
Sopen08g013500 Solanum pennellii HOM05D000004 ORTHO05D000002 4.6e-09 64.7 49 61.2
Peaxi162Scf00022g00611 Petunia axillaris HOM05D004064 ORTHO05D009561 7.9e-09 63.9 110 33.6
Sopen05g008970 Solanum pennellii HOM05D004064 ORTHO05D011910 7.9e-09 63.9 84 46.4
Sopen05g012050 Solanum pennellii HOM05D000017 ORTHO05D000013 7.9e-09 63.9 103 34.0
PGSC0003DMG400004103 Solanum tuberosum HOM05D004064 ORTHO05D009561 7.9e-09 63.9 101 33.7
PGSC0003DMG400006499 Solanum tuberosum HOM05D004064 ORTHO05D009909 7.9e-09 63.9 56 57.1
Sopen10g010720 Solanum pennellii HOM05D000017 ORTHO05D009561 1.0e-08 63.5 102 31.4
PGSC0003DMG400026053 Solanum tuberosum HOM05D004064 ORTHO05D009561 1.3e-08 63.2 72 41.7
Sopen12g028900 Solanum pennellii HOM05D037232 ORTHO05D009561 1.8e-08 62.8 97 35.1
Sopen03g028030 Solanum pennellii HOM05D000017 ORTHO05D009561 2.3e-08 62.4 102 34.3
PGSC0003DMG400004104 Solanum tuberosum HOM05D004064 ORTHO05D009561 2.3e-08 62.4 99 33.3
CAN.G362.17 Capsicum annuum HOM05D004064 ORTHO05D009561 3.0e-08 62.0 72 43.1
Nitab4.5_0003194g0020 Nicotiana tabacum HOM05D004064 ORTHO05D009561 3.0e-08 62.0 102 41.2
Sopen11g024290 Solanum pennellii HOM05D004064 ORTHO05D009909 3.0e-08 62.0 83 42.2
CAN.G4596.1 Capsicum annuum HOM05D004064 ORTHO05D009561 3.9e-08 61.6 99 36.4
CAN.G53.40 Capsicum annuum HOM05D004064 ORTHO05D009561 5.1e-08 61.2 65 46.2
Sopen12g025840 Solanum pennellii HOM05D000014 ORTHO05D011910 6.7e-08 60.8 53 58.5
Peaxi162Scf00010g00072 Petunia axillaris HOM05D006921 ORTHO05D009185 1.1e-07 60.1 66 47.0
Nitab4.5_0003496g0030 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.9e-07 59.3 72 48.6
Sopen06g016100 Solanum pennellii HOM05D004064 ORTHO05D009561 2.5e-07 58.9 99 32.3
Sopen07g022410 Solanum pennellii HOM05D004064 ORTHO05D011910 2.5e-07 58.9 47 59.6
Solyc10g054675.1 Solanum lycopersicum HOM05D004064 ORTHO05D011910 3.3e-07 58.5 86 39.5
Sopen05g016460 Solanum pennellii HOM05D000004 ORTHO05D009561 3.3e-07 58.5 66 43.9
Nitab4.5_0000021g0530 Nicotiana tabacum HOM05D004064 ORTHO05D009561 4.3e-07 58.2 61 50.8
Nitab4.5_0008516g0050 Nicotiana tabacum HOM05D004064 ORTHO05D009909 7.4e-07 57.4 70 48.6
Sopen11g010850 Solanum pennellii HOM05D000017 ORTHO05D009561 7.4e-07 57.4 94 35.1
Peaxi162Scf00007g00831 Petunia axillaris HOM05D006921 ORTHO05D009185 9.6e-07 57.0 94 41.5
PGSC0003DMG400046845 Solanum tuberosum HOM05D004064 ORTHO05D009561 9.6e-07 57.0 61 42.6
PGSC0003DMG400035350 Solanum tuberosum HOM05D004064 ORTHO05D011910 1.3e-06 56.6 67 46.3
CAN.G268.15 Capsicum annuum HOM05D004064 ORTHO05D009561 1.6e-06 56.2 37 73.0
Nitab4.5_0005436g0040 Nicotiana tabacum HOM05D006921 ORTHO05D009185 1.6e-06 56.2 66 42.4
CAN.G1759.4 Capsicum annuum HOM05D004064 ORTHO05D009561 2.1e-06 55.8 72 38.9
Peaxi162Scf00385g00076 Petunia axillaris HOM05D004064 ORTHO05D009561 3.7e-06 55.1 57 45.6
Peaxi162Scf00579g00618 Petunia axillaris HOM05D006921 ORTHO05D009185 3.7e-06 55.1 65 46.2
Sopen03g014420 Solanum pennellii HOM05D004064 ORTHO05D011910 3.7e-06 55.1 73 42.5
PGSC0003DMG400034895 Solanum tuberosum HOM05D004064 ORTHO05D009561 6.2e-06 54.3 97 36.1
PGSC0003DMG400038860 Solanum tuberosum HOM05D004064 ORTHO05D011910 6.2e-06 54.3 84 41.7


User provided reference genes

Program Settings