Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1273.42 Capsicum annuum HOM05D007682 ORTHO05D009690 1.5e-35 153.3 105 100.0
Solyc01g099930.3 Solanum lycopersicum HOM05D007682 ORTHO05D009690 1.1e-25 120.6 64 98.4
Nitab4.5_0003113g0070 Nicotiana tabacum HOM05D007682 ORTHO05D009690 7.8e-24 114.4 60 100.0
Peaxi162Scf00037g01515 Petunia axillaris HOM05D007682 ORTHO05D009690 1.7e-23 113.2 60 98.3
Hma1.2p1_0472F.1_g159680 Hydrangea macrophylla HOM05D007682 ORTHO05D009690 2.3e-23 112.8 105 83.8
Nitab4.5_0003497g0050 Nicotiana tabacum HOM05D007682 ORTHO05D009690 3.3e-22 109.0 103 65.0
Gorai.007G301900 Gossypium raimondii HOM05D007682 ORTHO05D009690 1.6e-21 106.7 63 88.9
Lsat_1_v5_gn_7_72960 Lactuca sativa HOM05D007682 ORTHO05D009690 2.1e-21 106.3 63 88.9
ECA236G4368 Erigeron canadensis HOM05D000036 ORTHO05D000441 2.8e-21 105.9 63 87.3
Manes.08G115600 Manihot esculenta HOM05D007682 ORTHO05D009690 2.8e-21 105.9 105 76.2
Cc02_g34370 Coffea canephora HOM05D007682 ORTHO05D009690 3.6e-21 105.5 104 76.9
Gohir.D11G279700 Gossypium hirsutum HOM05D007682 ORTHO05D009690 4.7e-21 105.1 63 87.3
TPR.G1619 Trifolium pratense HOM05D007682 ORTHO05D009690 4.7e-21 105.1 60 91.7
Actinidia21502 Actinidia chinensis HOM05D007682 ORTHO05D009690 6.2e-21 104.8 60 91.7
Duzib177G0692 Durio zibethinus HOM05D007682 ORTHO05D009690 6.2e-21 104.8 59 93.2
Gohir.A11G269500 Gossypium hirsutum HOM05D007682 ORTHO05D009690 6.2e-21 104.8 63 87.3
Medtr7g112600 Medicago truncatula HOM05D007682 ORTHO05D009690 6.2e-21 104.8 59 93.2
Psat3g011680 Pisum sativum HOM05D007682 ORTHO05D009690 6.2e-21 104.8 59 93.2
SGA_v2.0_scaffold81G26104 Striga asiatica HOM05D007682 ORTHO05D009690 6.2e-21 104.8 63 85.7
DCAR_022138 Daucus carota HOM05D007682 ORTHO05D009690 8.1e-21 104.4 64 84.4
Gohir.A08G208100 Gossypium hirsutum HOM05D007682 ORTHO05D009690 8.1e-21 104.4 63 87.3
Prupe.8G021600 Prunus persica HOM05D007682 ORTHO05D009690 1.1e-20 104.0 64 84.4
RcHm_v2.0_Chr6g0276771 Rosa chinensis HOM05D007682 ORTHO05D009690 1.4e-20 103.6 63 85.7
Haze_04118 Corylus avellana HOM05D007682 ORTHO05D009690 1.8e-20 103.2 106 57.5
MD10G1017700 Malus domestica HOM05D007682 ORTHO05D009690 1.8e-20 103.2 59 91.5
Os12g0554000 Oryza sativa ssp. japonica HOM05D007682 ORTHO05D009690 1.8e-20 103.2 64 79.7
THA.LOC104818730 Tarenaya hassleriana HOM05D007682 ORTHO05D009690 1.8e-20 103.2 64 84.4
arahy.Tifrunner.gnm1.ann1.P6132C Arachis hypogaea HOM05D007682 ORTHO05D009690 2.3e-20 102.8 64 84.4
arahy.Tifrunner.gnm1.ann1.S47DRU Arachis hypogaea HOM05D007682 ORTHO05D009690 2.3e-20 102.8 64 84.4
MSTRG.27972 Avicennia marina HOM05D007682 ORTHO05D009690 2.3e-20 102.8 105 75.2
Eucgr.H03256 Eucalyptus grandis HOM05D007682 ORTHO05D009690 2.3e-20 102.8 64 84.4
Oeu010924.1 Olea europaea HOM05D007682 ORTHO05D009690 2.3e-20 102.8 62 87.1
Thecc.05G315600 Theobroma cacao HOM05D007682 ORTHO05D009690 2.3e-20 102.8 63 87.3
Glyma.19G231600 Glycine max HOM05D007682 ORTHO05D009690 3.1e-20 102.4 59 91.5
Gohir.D08G224900 Gossypium hirsutum HOM05D007682 ORTHO05D009690 3.1e-20 102.4 60 88.3
FAN20G0672 Fragaria x ananassa HOM05D007682 ORTHO05D009690 4.0e-20 102.1 63 84.1
FAN24G1339 Fragaria x ananassa HOM05D007682 ORTHO05D009690 4.0e-20 102.1 63 84.1
Os12g0516700 Oryza sativa ssp. japonica HOM05D007682 ORTHO05D009690 4.0e-20 102.1 59 84.7
Sp2g20980 Schrenkiella parvula HOM05D007682 ORTHO05D009690 4.0e-20 102.1 59 89.8
Atru.chr2.100 Acer truncatum HOM05D007682 ORTHO05D009690 6.8e-20 101.3 63 84.1
A06p37270 Brassica napus HOM05D007682 ORTHO05D009690 6.8e-20 101.3 59 88.1
C07p41180 Brassica napus HOM05D007682 ORTHO05D009690 6.8e-20 101.3 59 88.1
BolC7t44646H Brassica oleracea HOM05D007682 ORTHO05D009690 6.8e-20 101.3 59 88.1
BraA06t26650Z Brassica rapa HOM05D007682 ORTHO05D009690 6.8e-20 101.3 59 88.1
CARHR186340 Cardamine hirsuta HOM05D007682 ORTHO05D009690 6.8e-20 101.3 59 89.8
PSO407G0292 Papaver somniferum HOM05D007682 ORTHO05D009690 6.8e-20 101.3 103 78.6
Aa31LG11G9610 Aethionema arabicum HOM05D007682 ORTHO05D009690 8.9e-20 100.9 59 88.1
Migut.N02098 Erythranthe guttata HOM05D007682 ORTHO05D009690 8.9e-20 100.9 60 88.3
SEGI_39810 Sequoiadendron giganteum HOM05D007682 ORTHO05D009690 8.9e-20 100.9 60 85.0
THA.LOC104821730 Tarenaya hassleriana HOM05D007682 ORTHO05D009690 8.9e-20 100.9 59 88.1
CSS0049840 Camellia sinensis var. sinensis HOM05D007682 ORTHO05D009690 1.2e-19 100.5 63 84.1
Glyma.03G234200 Glycine max HOM05D007682 ORTHO05D009690 1.2e-19 100.5 59 89.8
Gorai.004G238900 Gossypium raimondii HOM05D007682 ORTHO05D009690 1.2e-19 100.5 60 86.7
HanXRQChr11g0340111 Helianthus annuus HOM05D007682 ORTHO05D009690 1.2e-19 100.5 63 82.5
Lalb_Chr15g0077471 Lupinus albus HOM05D007682 ORTHO05D009690 1.2e-19 100.5 58 91.4
BcaNung04745 Brassica carinata HOM05D007682 ORTHO05D009690 1.5e-19 100.1 59 86.4
CiPaw.08G159600 Carya illinoinensis HOM05D007682 ORTHO05D009690 1.5e-19 100.1 105 77.1
GSVIVG01031165001 Vitis vinifera HOM05D000036 ORTHO05D000441 1.5e-19 100.1 59 89.8
AT5G27860 Arabidopsis thaliana HOM05D007682 ORTHO05D009690 2.0e-19 99.8 59 88.1
PSO170G1207 Papaver somniferum HOM05D007682 ORTHO05D009690 2.0e-19 99.8 59 88.1
AUR62000737 Chenopodium quinoa HOM05D007682 ORTHO05D009690 2.6e-19 99.4 59 86.4
Phvul.006G088300 Phaseolus vulgaris HOM05D007682 ORTHO05D009690 2.6e-19 99.4 59 88.1
PGR031G1366 Punica granatum HOM05D007682 ORTHO05D009690 2.6e-19 99.4 64 79.7
TWI56G1223 Tripterygium wilfordii HOM05D007682 ORTHO05D009690 2.6e-19 99.4 59 86.4
TAR633G0769 Trochodendron aralioides HOM05D007682 ORTHO05D009690 2.6e-19 99.4 65 84.6
Nn4g25761 Nelumbo nucifera HOM05D007682 ORTHO05D009690 3.4e-19 99.0 59 86.4
Potri.005G023000 Populus trichocarpa HOM05D007682 ORTHO05D009690 3.4e-19 99.0 64 81.2
SMO367G0406 Selaginella moellendorffii HOM05D007682 ORTHO05D009690 4.4e-19 98.6 64 79.7
CDE05G1347 Ceratophyllum demersum HOM05D007682 ORTHO05D009690 9.8e-19 97.4 58 86.2
FAN15G0817 Fragaria x ananassa HOM05D007682 ORTHO05D009690 9.8e-19 97.4 63 81.0
AUR62005227 Chenopodium quinoa HOM05D007682 ORTHO05D009690 1.3e-18 97.1 59 83.1
CsaV3_1G038640 Cucumis sativus L. HOM05D007682 ORTHO05D009690 1.3e-18 97.1 60 83.3
HPP92_010663 Vanilla planifolia HOM05D007682 ORTHO05D009690 1.3e-18 97.1 62 85.5
QL03p019528 Quercus lobata HOM05D007682 ORTHO05D009690 1.7e-18 96.7 63 77.8
CDE11G0615 Ceratophyllum demersum HOM05D007682 ORTHO05D009690 2.9e-18 95.9 58 84.5
Sed0011876 Sechium edule HOM05D007682 ORTHO05D009690 4.9e-18 95.1 59 83.1
Sabra05G0029000 Salix brachista HOM05D007682 ORTHO05D009690 8.3e-18 94.4 59 84.7
Sc16g0008750 Simmondsia chinensis HOM05D000036 ORTHO05D001038 8.3e-18 94.4 59 84.7
Cfa006654 Carpinus fangiana HOM05D007682 ORTHO05D009690 1.1e-17 94.0 64 76.6
Dinv30837 Davidia involucrata HOM05D007682 ORTHO05D009690 2.4e-17 92.8 63 77.8
Zm00001eb410110 Zea mays HOM05D007682 ORTHO05D009690 2.4e-17 92.8 61 78.7
AL6G39080 Arabidopsis lyrata HOM05D007682 ORTHO05D009690 2.1e-16 89.7 59 81.4
Lj1g0016295 Lotus japonicus HOM05D007682 ORTHO05D009690 6.0e-16 88.2 64 78.1
Hund07111 Selenicereus undatus HOM05D007682 ORTHO05D009690 3.9e-15 85.5 85 62.4
MBI19_g44105_MAGBIO Magnolia biondii HOM05D007682 ORTHO05D009690 6.6e-15 84.7 54 81.5
Ah.06g189950 Amaranthus hybridus HOM05D007682 ORTHO05D009690 1.1e-14 84.0 51 84.3
unitig_699.g19250 Utricularia gibba HOM05D007682 ORTHO05D009690 1.1e-14 84.0 50 84.0
HPP92_010684 Vanilla planifolia HOM05D007682 ORTHO05D009690 1.5e-14 83.6 67 70.1
EL10Ac4g09894 Beta vulgaris HOM05D007682 ORTHO05D009690 1.9e-14 83.2 51 82.4
CSS0031357 Camellia sinensis var. sinensis HOM05D007682 ORTHO05D009690 1.9e-14 83.2 64 68.8
ATR0693G225 Amborella trichopoda HOM05D007682 ORTHO05D009690 2.5e-14 82.8 52 82.7
DCAR_022140 Daucus carota HOM05D007682 ORTHO05D009690 4.0e-12 75.5 52 75.0
MBI19_g47767_MAGBIO Magnolia biondii HOM05D007682 ORTHO05D009690 8.4e-10 67.8 54 70.4
COL.COLO4_10551 Corchorus olitorius HOM05D007682 ORTHO05D009690 5.1e-07 58.5 33 90.9
FvH4_2g14440 Fragaria vesca HOM05D007682 ORTHO05D009690 1.9e-06 56.6 36 75.0
Pp3c11_23030 Physcomitrium patens HOM05D007682 ORTHO05D009690 1.9e-06 56.6 51 60.8
VMungo0540G1787 Vigna mungo HOM05D007682 ORTHO05D009690 1.9e-06 56.6 29 93.1


User provided reference genes

Program Settings