Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1271.13 Capsicum annuum HOM05D006698 ORTHO05D008415 0.0e+00 1079.7 534 100.0
PGSC0003DMG400003770 Solanum tuberosum HOM05D006698 ORTHO05D008415 7.6e-284 979.9 534 89.7
Sopen04g034840 Solanum pennellii HOM05D006698 ORTHO05D008415 5.4e-282 973.8 534 88.8
Solyc04g081230.3 Solanum lycopersicum HOM05D006698 ORTHO05D008415 3.6e-278 961.1 534 88.0
Peaxi162Scf00287g01719 Petunia axillaris HOM05D006698 ORTHO05D008415 1.5e-260 902.5 536 82.5
Nitab4.5_0001988g0020 Nicotiana tabacum HOM05D006698 ORTHO05D008415 5.9e-244 847.4 484 83.3
Oeu027550.1 Olea europaea HOM05D006698 ORTHO05D008415 1.8e-200 703.0 538 65.2
MSTRG.22331 Avicennia marina HOM05D006698 ORTHO05D008415 3.3e-194 682.2 538 63.0
CSS0038613 Camellia sinensis var. sinensis HOM05D006698 ORTHO05D008415 3.3e-194 682.2 540 63.3
Cc10_g01920 Coffea canephora HOM05D006698 ORTHO05D008415 1.6e-193 679.9 596 59.7
Rhsim06G0023700 Rhododendron simsii HOM05D006698 ORTHO05D008415 6.8e-192 674.5 541 62.5
SGA_v2.0_scaffold47G17495 Striga asiatica HOM05D006698 ORTHO05D008415 3.2e-189 665.6 537 61.5
Lj4A795T33 Lonicera japonica HOM05D006698 ORTHO05D008415 1.0e-187 660.6 539 61.8
Migut.N03146 Erythranthe guttata HOM05D006698 ORTHO05D008415 1.4e-184 650.2 538 59.5
vmacro21711 Vaccinium macrocarpon HOM05D006698 ORTHO05D008415 8.9e-184 647.5 563 58.8
Oeu027551.1 Olea europaea HOM05D006698 ORTHO05D008415 7.5e-183 644.4 492 64.4
Thecc.08G041000 Theobroma cacao HOM05D006698 ORTHO05D008415 2.9e-182 642.5 541 60.8
TAR628G0086 Trochodendron aralioides HOM05D006698 ORTHO05D008415 6.0e-180 634.8 541 59.3
GSVIVG01009862001 Vitis vinifera HOM05D006698 ORTHO05D008415 1.0e-179 634.0 539 59.0
MELO3C003770.2 Cucumis melo HOM05D006698 ORTHO05D008415 8.6e-179 630.9 541 57.3
ECA238G1455 Erigeron canadensis HOM05D006698 ORTHO05D008415 7.3e-178 627.9 531 60.1
CsaV3_3G045670 Cucumis sativus L. HOM05D006698 ORTHO05D008415 2.8e-177 625.9 541 56.2
Duzib093G0690 Durio zibethinus HOM05D006698 ORTHO05D008415 2.8e-177 625.9 541 60.6
Sed0002694 Sechium edule HOM05D006698 ORTHO05D008415 4.7e-177 625.2 541 55.5
Gorai.002G124600 Gossypium raimondii HOM05D006698 ORTHO05D008415 1.4e-176 623.6 541 59.1
Nn6g32301 Nelumbo nucifera HOM05D006698 ORTHO05D008415 2.4e-176 622.9 540 58.7
Ciclev10000799m.g Citrus clementina HOM05D006698 ORTHO05D008415 5.2e-176 621.7 541 57.3
Prupe.1G368700 Prunus persica HOM05D006698 ORTHO05D008415 6.8e-176 621.3 541 57.7
PSO170G5361 Papaver somniferum HOM05D006698 ORTHO05D008415 8.9e-176 620.9 540 57.8
Cfa013924 Carpinus fangiana HOM05D006698 ORTHO05D008415 1.2e-175 620.5 541 57.5
Gohir.D01G099300 Gossypium hirsutum HOM05D006698 ORTHO05D008415 2.0e-175 619.8 541 59.1
Gohir.A01G112500 Gossypium hirsutum HOM05D006698 ORTHO05D008415 2.6e-175 619.4 541 59.3
CiPaw.09G133200 Carya illinoinensis HOM05D006698 ORTHO05D008415 3.4e-175 619.0 541 57.7
QL02p011012 Quercus lobata HOM05D006698 ORTHO05D008415 2.2e-174 616.3 543 58.0
TWI12G1415 Tripterygium wilfordii HOM05D006698 ORTHO05D008415 4.9e-174 615.1 541 57.9
Haze_22605 Corylus avellana HOM05D006698 ORTHO05D008415 6.4e-174 614.8 567 55.2
Glyma.04G215400 Glycine max HOM05D006698 ORTHO05D008415 1.4e-173 613.6 542 58.1
Potri.005G236400 Populus trichocarpa HOM05D006698 ORTHO05D008415 1.4e-173 613.6 542 57.0
PSO210G5790 Papaver somniferum HOM05D006698 ORTHO05D008415 1.9e-173 613.2 540 57.2
Lsat_1_v5_gn_2_11660 Lactuca sativa HOM05D006698 ORTHO05D008415 3.2e-173 612.5 530 58.3
Aqoxy5G01450 Aquilegia oxysepala HOM05D006698 ORTHO05D008415 4.1e-173 612.1 540 55.7
Cpa.g.sc14.105 Carica papaya HOM05D006698 ORTHO05D008415 4.1e-173 612.1 546 59.2
Lj1g0011928 Lotus japonicus HOM05D006698 ORTHO05D008415 4.1e-173 612.1 544 57.5
CANSAT35G1394 Cannabis sativa HOM05D006698 ORTHO05D008415 9.2e-173 610.9 541 56.2
Sabra05G0182800 Salix brachista HOM05D006698 ORTHO05D008415 1.2e-172 610.5 542 57.6
HanXRQChr04g0101141 Helianthus annuus HOM05D006698 ORTHO05D008415 3.5e-172 609.0 534 57.7
THA.LOC104823101 Tarenaya hassleriana HOM05D006698 ORTHO05D008415 3.5e-172 609.0 540 55.7
RcHm_v2.0_Chr6g0302501 Rosa chinensis HOM05D006698 ORTHO05D008415 1.0e-171 607.4 539 57.0
Hund24100 Selenicereus undatus HOM05D006698 ORTHO05D008415 1.7e-171 606.7 538 56.9
Eucgr.F01632 Eucalyptus grandis HOM05D006698 ORTHO05D008415 2.3e-171 606.3 542 55.4
FAN27G1564 Fragaria x ananassa HOM05D006698 ORTHO05D008415 1.1e-170 604.0 538 56.3
SalBow8G5338 Salvia bowleyana HOM05D006698 ORTHO05D008415 1.1e-170 604.0 586 54.9
Ca_16921_v3 Cicer arietinum L. HOM05D006698 ORTHO05D008415 1.5e-170 603.6 541 56.0
FvH4_2g38790 Fragaria vesca HOM05D006698 ORTHO05D008415 2.5e-170 602.8 538 56.1
FAN15G2932 Fragaria x ananassa HOM05D006698 ORTHO05D008415 1.6e-169 600.1 538 55.8
arahy.Tifrunner.gnm1.ann1.32JQZQ Arachis hypogaea HOM05D006698 ORTHO05D008415 2.8e-169 599.4 541 56.4
MD09G1232000 Malus domestica HOM05D006698 ORTHO05D008415 3.6e-169 599.0 543 56.2
TPR.G18731 Trifolium pratense HOM05D006698 ORTHO05D008415 6.2e-169 598.2 541 54.5
arahy.Tifrunner.gnm1.ann1.HU0S2W Arachis hypogaea HOM05D006698 ORTHO05D008415 3.1e-168 595.9 541 55.8
AUR62035724 Chenopodium quinoa HOM05D006698 ORTHO05D008415 2.0e-167 593.2 538 53.9
Lalb_Chr08g0238541 Lupinus albus HOM05D006698 ORTHO05D008415 1.9e-165 586.6 540 55.7
Medtr3g095660 Medicago truncatula HOM05D006698 ORTHO05D008415 5.4e-165 585.1 540 54.6
Phvul.009G147800 Phaseolus vulgaris HOM05D006698 ORTHO05D008415 5.4e-165 585.1 541 56.7
PGR083G1075 Punica granatum HOM05D006698 ORTHO05D008415 2.1e-164 583.2 548 56.2
Carub.0007s3635 Capsella rubella HOM05D006698 ORTHO05D008415 1.0e-163 580.9 544 53.5
CARHR262700 Cardamine hirsuta HOM05D006698 ORTHO05D008415 2.3e-163 579.7 543 53.0
DCAR_009935 Daucus carota HOM05D006698 ORTHO05D008415 5.1e-163 578.6 540 55.0
C04p46000 Brassica napus HOM05D006698 ORTHO05D008415 1.1e-162 577.4 543 54.0
BolC4t26182H Brassica oleracea HOM05D006698 ORTHO05D008415 1.5e-162 577.0 543 54.0
AT5G39590 Arabidopsis thaliana HOM05D006698 ORTHO05D008415 3.3e-162 575.9 544 53.3
Ah.11g039450 Amaranthus hybridus HOM05D006698 ORTHO05D008415 7.3e-162 574.7 538 53.7
AL7G50720 Arabidopsis lyrata HOM05D006698 ORTHO05D008415 7.3e-162 574.7 544 53.1
BraA04t16897Z Brassica rapa HOM05D006698 ORTHO05D008415 3.6e-161 572.4 543 53.6
A04p12330 Brassica napus HOM05D006698 ORTHO05D008415 1.4e-160 570.5 543 53.2
Sp7g02400 Schrenkiella parvula HOM05D006698 ORTHO05D008415 2.4e-160 569.7 543 52.9
EL10Ac1g02260 Beta vulgaris HOM05D006698 ORTHO05D008415 4.5e-159 565.5 538 50.7
VMungo1309G0200 Vigna mungo HOM05D006698 ORTHO05D008415 1.7e-158 563.5 541 55.3
PSO170G6283 Papaver somniferum HOM05D006698 ORTHO05D008415 3.8e-158 562.4 549 54.3
PSO210G1198 Papaver somniferum HOM05D006698 ORTHO05D008415 4.9e-158 562.0 549 54.3
MBI09_g13764_MAGBIO Magnolia biondii HOM05D006698 ORTHO05D008415 1.2e-156 557.4 525 56.2
Aa31LG9G16490 Aethionema arabicum HOM05D006698 ORTHO05D008415 2.7e-156 556.2 575 49.6
Atru.chr13.326 Acer truncatum HOM05D006698 ORTHO05D008415 5.1e-155 552.0 468 60.0
AUR62035437 Chenopodium quinoa HOM05D006698 ORTHO05D008415 4.3e-154 548.9 457 56.0
ClCG05G018510 Citrullus lanatus HOM05D006698 ORTHO05D008415 4.8e-153 545.4 541 51.0
FAN20G0171 Fragaria x ananassa HOM05D006698 ORTHO05D008415 4.8e-153 545.4 630 47.6
Thhalv10027724m.g Eutrema salsugineum HOM05D006698 ORTHO05D008415 7.6e-151 538.1 542 50.4
Actinidia16966 Actinidia chinensis HOM05D006698 ORTHO05D008415 6.4e-150 535.0 447 61.1
BcaB06g27346 Brassica carinata HOM05D006698 ORTHO05D008415 3.1e-144 516.2 542 50.0
Manes.18G015700 Manihot esculenta HOM05D006698 ORTHO05D008415 5.1e-139 498.8 428 58.2
ATR0147G003 Amborella trichopoda HOM05D006698 ORTHO05D008415 1.4e-131 474.2 549 47.7
HPP92_014935 Vanilla planifolia HOM05D006698 ORTHO05D008415 3.0e-131 473.0 543 46.6
Psat5g063280 Pisum sativum HOM05D006698 ORTHO05D008415 5.1e-131 472.2 471 50.5
Dinv31825 Davidia involucrata HOM05D006698 ORTHO05D008415 1.3e-129 467.6 540 49.1
SHI08084 Sapria himalayana HOM05D006698 ORTHO05D008415 1.0e-126 458.0 563 46.7
CDE09G0091 Ceratophyllum demersum HOM05D006698 ORTHO05D008415 3.0e-123 446.4 468 50.0
Os04g0663700 Oryza sativa ssp. japonica HOM05D006698 ORTHO05D008415 7.4e-122 441.8 554 46.2
Potri.002G025032 Populus trichocarpa HOM05D006698 ORTHO05D008415 4.1e-120 436.0 310 67.1
Zm00001eb067290 Zea mays HOM05D006698 ORTHO05D008415 1.5e-119 434.1 558 45.2
SEGI_26467 Sequoiadendron giganteum HOM05D006698 ORTHO05D008415 1.0e-110 404.8 486 45.5
Sc15g0005110 Simmondsia chinensis HOM05D006698 ORTHO05D008415 3.2e-101 373.2 400 48.2
Pp3c16_7090 Physcomitrium patens HOM05D006698 ORTHO05D008415 1.2e-90 338.2 559 36.1
Mapoly0043s0042 Marchantia polymorpha HOM05D006698 ORTHO05D008415 6.6e-86 322.4 573 35.8
SMO145G0265 Selaginella moellendorffii HOM05D006698 ORTHO05D008415 9.8e-82 308.5 466 39.3
Pp3c5_11350 Physcomitrium patens HOM05D006698 ORTHO05D008415 2.2e-81 307.4 560 34.5
AagrBONN_evm.TU.Sc2ySwM_344.812 Anthoceros agrestis HOM05D006698 ORTHO05D008415 4.6e-79 299.7 580 36.9
AagrBONN_evm.TU.Sc2ySwM_344.842 Anthoceros agrestis HOM05D006698 ORTHO05D008415 5.0e-78 296.2 573 36.6
unitig_27.g25099 Utricularia gibba HOM05D006698 ORTHO05D008415 3.6e-76 290.0 218 65.1
Glyma.06G150801 Glycine max HOM05D006698 ORTHO05D008415 1.3e-57 228.4 208 55.8
unitig_27.g25098 Utricularia gibba HOM05D006698 ORTHO05D008415 6.4e-57 226.1 256 46.9
QL03p018220 Quercus lobata HOM05D006698 ORTHO05D008415 9.3e-40 169.1 108 72.2
Potri.002G024966 Populus trichocarpa HOM05D006698 ORTHO05D008415 2.1e-39 167.9 174 52.3
Actinidia16965 Actinidia chinensis HOM05D006698 ORTHO05D008415 7.4e-29 132.9 76 85.5
QL03p018243 Quercus lobata HOM05D006698 ORTHO05D008415 3.7e-28 130.6 187 41.2
HanXRQChr05g0147331 Helianthus annuus HOM05D006698 ORTHO05D008415 5.5e-24 116.7 119 44.5
Medtr7g098720 Medicago truncatula HOM05D006698 ORTHO05D008415 6.1e-23 113.2 124 47.6
Oeu046256.1 Olea europaea HOM05D006698 ORTHO05D008415 1.7e-17 95.1 63 65.1
Cpa.g.sc14.104 Carica papaya HOM05D006698 ORTHO05D008415 2.3e-14 84.7 69 59.4
EL10Ac7g16823 Beta vulgaris HOM05D006431 ORTHO05D007918 5.0e-09 67.0 122 32.8
MBI06_g37498_MAGBIO Magnolia biondii HOM05D002910 ORTHO05D030039 1.1e-08 65.9 92 37.0
Duzib116G0861 Durio zibethinus HOM05D006698 ORTHO05D008415 5.5e-08 63.5 36 77.8
ATR0772G016 Amborella trichopoda HOM05D006431 ORTHO05D007918 1.2e-07 62.4 122 31.1
AUR62006262 Chenopodium quinoa HOM05D006431 ORTHO05D007918 1.6e-07 62.0 122 29.5
AUR62028512 Chenopodium quinoa HOM05D006431 ORTHO05D007918 4.7e-07 60.5 122 28.7
ATR0370G001 Amborella trichopoda HOM05D006698 ORTHO05D008415 6.7e-06 56.6 51 58.8


User provided reference genes

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