Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G126.13 Capsicum annuum HOM05D002831 ORTHO05D010484 5.9e-24 113.2 52 100.0
Solyc03g007990.2 Solanum lycopersicum HOM05D002831 ORTHO05D010484 4.0e-20 100.5 52 90.4
Nitab4.5_0000084g0420 Nicotiana tabacum HOM05D002831 ORTHO05D010484 6.7e-20 99.8 51 88.2
Peaxi162Scf00444g00118 Petunia axillaris HOM05D002831 ORTHO05D010484 1.5e-19 98.6 52 86.5
Atru.ctg97_1.17 Acer truncatum HOM05D002831 ORTHO05D010484 1.7e-15 85.1 53 77.4
Thecc.03G183800 Theobroma cacao HOM05D002831 ORTHO05D010484 1.7e-15 85.1 53 75.5
Cc02_g02410 Coffea canephora HOM05D002831 ORTHO05D010484 6.5e-15 83.2 52 73.1
MD01G1208000 Malus domestica HOM05D002831 ORTHO05D010484 2.5e-14 81.3 53 75.5
Prupe.2G300500 Prunus persica HOM05D002831 ORTHO05D010484 2.5e-14 81.3 53 75.5
Gorai.004G117400 Gossypium raimondii HOM05D002831 ORTHO05D004341 3.2e-14 80.9 52 75.0
Manes.14G022900 Manihot esculenta HOM05D002831 ORTHO05D010484 4.2e-14 80.5 53 75.5
Nitab4.5_0003825g0100 Nicotiana tabacum HOM05D002831 ORTHO05D010484 4.2e-14 80.5 51 76.5
Potri.017G143300 Populus trichocarpa HOM05D002831 ORTHO05D010484 4.2e-14 80.5 53 75.5
GSVIVG01028866001 Vitis vinifera HOM05D002831 ORTHO05D010484 4.2e-14 80.5 52 75.0
CiPaw.06G003400 Carya illinoinensis HOM05D002831 ORTHO05D010484 7.2e-14 79.7 53 73.6
Gohir.D09G177300 Gossypium hirsutum HOM05D002831 ORTHO05D010484 7.2e-14 79.7 53 71.7
Potri.004G080000 Populus trichocarpa HOM05D002831 ORTHO05D010484 7.2e-14 79.7 53 75.5
Gorai.006G199300 Gossypium raimondii HOM05D002831 ORTHO05D010484 9.4e-14 79.3 53 69.8
Manes.06G152150 Manihot esculenta HOM05D002831 ORTHO05D010484 9.4e-14 79.3 53 73.6
CiPaw.06G003200 Carya illinoinensis HOM05D002831 ORTHO05D010484 1.2e-13 79.0 53 71.7
Nn1g01626 Nelumbo nucifera HOM05D002831 ORTHO05D010484 1.2e-13 79.0 53 77.4
arahy.Tifrunner.gnm1.ann1.VWVY78 Arachis hypogaea HOM05D002831 ORTHO05D010484 1.6e-13 78.6 51 72.5
Gohir.D11G011200 Gossypium hirsutum HOM05D002831 ORTHO05D010484 2.1e-13 78.2 53 69.8
Gohir.A12G255400 Gossypium hirsutum HOM05D002831 ORTHO05D010484 2.7e-13 77.8 53 69.8
Gohir.D12G256800 Gossypium hirsutum HOM05D002831 ORTHO05D010484 2.7e-13 77.8 53 69.8
Gorai.008G275000 Gossypium raimondii HOM05D002831 ORTHO05D010484 2.7e-13 77.8 53 69.8
CSS0001563 Camellia sinensis var. sinensis HOM05D002831 ORTHO05D010484 8.0e-13 76.3 53 71.7
CSS0038907 Camellia sinensis var. sinensis HOM05D002831 ORTHO05D010484 8.0e-13 76.3 53 71.7
Prupe.7G027400 Prunus persica HOM05D002831 ORTHO05D010484 8.0e-13 76.3 51 70.6
Sabra04G0053100 Salix brachista HOM05D002831 ORTHO05D004341 1.0e-12 75.9 52 71.2
Glyma.20G162551 Glycine max HOM05D002831 ORTHO05D010484 1.4e-12 75.5 53 66.0
vmacro06629 Vaccinium macrocarpon HOM05D002831 ORTHO05D004341 1.8e-12 75.1 52 69.2
Gohir.A11G012000 Gossypium hirsutum HOM05D002831 ORTHO05D010484 3.0e-12 74.3 53 67.9
Glyma.09G132600 Glycine max HOM05D002831 ORTHO05D010484 5.2e-12 73.6 52 67.3
Glyma.16G179250 Glycine max HOM05D002831 ORTHO05D010484 5.2e-12 73.6 52 67.3
CAN.G204.17 Capsicum annuum HOM05D002831 ORTHO05D010484 6.8e-12 73.2 52 69.2
Glyma.10G231251 Glycine max HOM05D002831 ORTHO05D010484 6.8e-12 73.2 53 62.3
MD07G1278600 Malus domestica HOM05D002831 ORTHO05D010484 8.8e-12 72.8 53 66.0
CiPaw.12G018400 Carya illinoinensis HOM05D002831 ORTHO05D010484 3.7e-10 67.4 44 75.0
Cfa016283 Carpinus fangiana HOM05D002831 ORTHO05D004341 8.3e-10 66.2 43 74.4
Lalb_Chr02g0141241 Lupinus albus HOM05D002831 ORTHO05D010484 8.3e-10 66.2 54 64.8
Dinv35249 Davidia involucrata HOM05D002831 ORTHO05D004341 1.8e-09 65.1 44 75.0
RcHm_v2.0_Chr1g0378241 Rosa chinensis HOM05D002831 ORTHO05D004341 1.8e-09 65.1 44 72.7
Lalb_Chr03g0034821 Lupinus albus HOM05D002831 ORTHO05D010484 4.1e-09 63.9 50 60.0
FAN03G0192 Fragaria x ananassa HOM05D002831 ORTHO05D010484 5.4e-09 63.5 44 70.5
Carub.0008s1269 Capsella rubella HOM05D002831 ORTHO05D010484 9.1e-09 62.8 53 58.5
VMungo0464G0591 Vigna mungo HOM05D002831 ORTHO05D004341 9.1e-09 62.8 50 62.0
ClCG05G008350 Citrullus lanatus HOM05D002831 ORTHO05D010484 1.2e-08 62.4 53 60.4
Nitab4.5_0000248g0010 Nicotiana tabacum HOM05D002831 ORTHO05D004341 1.2e-08 62.4 43 74.4
vmacro09817 Vaccinium macrocarpon HOM05D002831 ORTHO05D004341 1.2e-08 62.4 45 66.7
FAN06G3328 Fragaria x ananassa HOM05D002831 ORTHO05D004341 2.7e-08 61.2 44 68.2
Rhsim03G0190700 Rhododendron simsii HOM05D002831 ORTHO05D004341 2.7e-08 61.2 46 65.2
Migut.F00296 Erythranthe guttata HOM05D002831 ORTHO05D004341 3.5e-08 60.8 46 58.7
CSS0020125 Camellia sinensis var. sinensis HOM05D002831 ORTHO05D010484 4.5e-08 60.5 53 60.4
CSS0026204 Camellia sinensis var. sinensis HOM05D002831 ORTHO05D010484 4.5e-08 60.5 53 60.4
CARHR233120 Cardamine hirsuta HOM05D002831 ORTHO05D010484 4.5e-08 60.5 53 56.6
Lalb_Chr21g0305231 Lupinus albus HOM05D002831 ORTHO05D010484 7.7e-08 59.7 54 61.1
SGA_v2.0_scaffold60G21104 Striga asiatica HOM05D002831 ORTHO05D004341 1.7e-07 58.5 45 57.8
Peaxi162Scf00618g00726 Petunia axillaris HOM05D002831 ORTHO05D010484 3.8e-07 57.4 43 62.8
Sabra06G0007800 Salix brachista HOM05D002831 ORTHO05D010484 3.8e-07 57.4 43 67.4
BolC1t02047H Brassica oleracea HOM05D002831 ORTHO05D010484 5.0e-07 57.0 52 55.8
BraA01t01646Z Brassica rapa HOM05D002831 ORTHO05D010484 5.0e-07 57.0 52 55.8
Carub.0007s1529 Capsella rubella HOM05D002831 ORTHO05D010484 5.0e-07 57.0 53 54.7
BolC1t02050H Brassica oleracea HOM05D002831 ORTHO05D010484 1.1e-06 55.8 53 52.8
A03p56200 Brassica napus HOM05D002831 ORTHO05D010484 2.5e-06 54.7 52 51.9
BraA03t14690Z Brassica rapa HOM05D002831 ORTHO05D010484 2.5e-06 54.7 52 51.9
BraA01t01649Z Brassica rapa HOM05D002831 ORTHO05D010484 3.2e-06 54.3 53 50.9
TPR.G7753 Trifolium pratense HOM05D002831 ORTHO05D004341 3.2e-06 54.3 43 62.8
Ah.07g206590 Amaranthus hybridus HOM05D002831 ORTHO05D004341 5.5e-06 53.5 52 50.0
Ah.13g069160 Amaranthus hybridus HOM05D004727 ORTHO05D005788 5.5e-06 53.5 53 54.7
A02p11710 Brassica napus HOM05D002831 ORTHO05D010484 7.2e-06 53.1 41 53.7
Hma1.2p1_0274F.1_g110180 Hydrangea macrophylla HOM05D002831 ORTHO05D004341 9.5e-06 52.8 38 68.4
VMungo0720G1018 Vigna mungo HOM05D002831 ORTHO05D004341 9.5e-06 52.8 43 60.5


User provided reference genes

Program Settings