Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1258.3 Capsicum annuum HOM05D003654 ORTHO05D004176 1.1e-59 233.0 110 100.0
Sopen08g013660 Solanum pennellii HOM05D003654 ORTHO05D004176 4.1e-27 124.8 78 79.5
Solyc08g044540.1 Solanum lycopersicum HOM05D003654 ORTHO05D004176 7.1e-27 124.0 78 79.5
Nitab4.5_0000808g0050 Nicotiana tabacum HOM05D003654 ORTHO05D004176 3.0e-25 118.6 92 68.5
Peaxi162Scf00071g01115 Petunia axillaris HOM05D003654 ORTHO05D004176 5.6e-24 114.4 88 68.2
Nitab4.5_0005680g0020 Nicotiana tabacum HOM05D003654 ORTHO05D004176 4.6e-18 94.7 75 68.0
Carub.0005s2429 Capsella rubella HOM05D003654 ORTHO05D004176 2.5e-08 62.4 91 42.9
BcaC07g40377 Brassica carinata HOM05D003654 ORTHO05D004176 1.3e-07 60.1 92 44.6
Thhalv10006420m.g Eutrema salsugineum HOM05D003654 ORTHO05D004176 1.6e-07 59.7 92 40.2
Lsat_1_v5_gn_9_28901 Lactuca sativa HOM05D003654 ORTHO05D004176 1.6e-07 59.7 74 41.9
Aqoxy7G00792 Aquilegia oxysepala HOM05D003654 ORTHO05D004176 2.1e-07 59.3 74 40.5
CARHR167650 Cardamine hirsuta HOM05D003654 ORTHO05D004176 2.1e-07 59.3 38 63.2
Ciclev10033218m.g Citrus clementina HOM05D003654 ORTHO05D004176 2.1e-07 59.3 82 42.7
Gohir.D08G164000 Gossypium hirsutum HOM05D003654 ORTHO05D004176 2.8e-07 58.9 75 40.0
Gorai.004G171000 Gossypium raimondii HOM05D003654 ORTHO05D004176 3.6e-07 58.5 75 40.0
CsaV3_3G039380 Cucumis sativus L. HOM05D003654 ORTHO05D004176 4.8e-07 58.2 58 46.6
Nitab4.5_0006340g0010 Nicotiana tabacum HOM05D003654 ORTHO05D004176 4.8e-07 58.2 52 51.9
Atru.chr1.1088 Acer truncatum HOM05D003654 ORTHO05D004176 6.2e-07 57.8 38 60.5
BcaC07g40378 Brassica carinata HOM05D003654 ORTHO05D004176 8.1e-07 57.4 96 40.6
Manes.10G139300 Manihot esculenta HOM05D003654 ORTHO05D004176 8.1e-07 57.4 38 63.2
THA.LOC109117091 Tarenaya hassleriana HOM05D003654 ORTHO05D004176 8.1e-07 57.4 41 56.1
BraA09t40486Z Brassica rapa HOM05D003654 ORTHO05D004176 1.1e-06 57.0 93 35.5
Solyc01g087580.3 Solanum lycopersicum HOM05D003654 ORTHO05D004176 1.1e-06 57.0 35 68.6
BcaC02g09939 Brassica carinata HOM05D003654 ORTHO05D004176 1.4e-06 56.6 37 62.2
C04p34970 Brassica napus HOM05D003654 ORTHO05D004176 1.4e-06 56.6 37 62.2
BolC4t25052H Brassica oleracea HOM05D003654 ORTHO05D004176 1.4e-06 56.6 37 62.2
Potri.001G263404 Populus trichocarpa HOM05D003654 ORTHO05D004176 1.4e-06 56.6 72 40.3
BcaC07g40382 Brassica carinata HOM05D003654 ORTHO05D004176 1.8e-06 56.2 41 58.5
C08p32930 Brassica napus HOM05D003654 ORTHO05D004176 1.8e-06 56.2 41 58.5
BolC8t50897H Brassica oleracea HOM05D003654 ORTHO05D004176 1.8e-06 56.2 41 58.5
Thecc.05G154000 Theobroma cacao HOM05D003654 ORTHO05D004176 1.8e-06 56.2 57 45.6
Ciclev10006321m.g Citrus clementina HOM05D003654 ORTHO05D004176 2.4e-06 55.8 35 65.7
Haze_19862 Corylus avellana HOM05D003654 ORTHO05D004176 2.4e-06 55.8 77 39.0
Lsat_1_v5_gn_9_28921 Lactuca sativa HOM05D003654 ORTHO05D004176 2.4e-06 55.8 40 60.0
Lsat_1_v5_gn_9_28941 Lactuca sativa HOM05D003654 ORTHO05D004176 2.4e-06 55.8 40 60.0
PGSC0003DMG400006790 Solanum tuberosum HOM05D003654 ORTHO05D004176 2.4e-06 55.8 87 37.9
SalBow5G4200 Salvia bowleyana HOM05D003654 ORTHO05D004176 3.1e-06 55.5 78 35.9
Sc10g0000210 Simmondsia chinensis HOM05D003654 ORTHO05D004176 3.1e-06 55.5 82 36.6
Sopen01g034550 Solanum pennellii HOM05D003654 ORTHO05D004176 3.1e-06 55.5 34 67.6
TAR633G1637 Trochodendron aralioides HOM05D003654 ORTHO05D004176 3.1e-06 55.5 38 57.9
Hma1.2p1_2266F.1_g318450 Hydrangea macrophylla HOM05D003654 ORTHO05D004176 4.0e-06 55.1 84 36.9
PGSC0003DMG400006788 Solanum tuberosum HOM05D003654 ORTHO05D004176 4.0e-06 55.1 34 64.7
PGSC0003DMG400027273 Solanum tuberosum HOM05D003654 ORTHO05D004176 4.0e-06 55.1 42 52.4
PGSC0003DMG400006789 Solanum tuberosum HOM05D003654 ORTHO05D004176 5.3e-06 54.7 34 67.6
Atru.chr11.2594 Acer truncatum HOM05D003654 ORTHO05D004176 6.9e-06 54.3 42 54.8
Eucgr.H02820 Eucalyptus grandis HOM05D003654 ORTHO05D004176 6.9e-06 54.3 38 60.5
Atru.chr1.1086 Acer truncatum HOM05D003654 ORTHO05D004176 9.0e-06 53.9 85 34.1
DCAR_022378 Daucus carota HOM05D003654 ORTHO05D004176 9.0e-06 53.9 85 36.5
Hma1.2p1_2266F.1_g318440 Hydrangea macrophylla HOM05D003654 ORTHO05D004176 9.0e-06 53.9 38 57.9
Lsat_1_v5_gn_9_28881 Lactuca sativa HOM05D003654 ORTHO05D004176 9.0e-06 53.9 40 55.0
SEGI_17870 Sequoiadendron giganteum HOM05D003654 ORTHO05D004176 9.0e-06 53.9 37 62.2


User provided reference genes

Program Settings