Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1256.1 Capsicum annuum HOM05D014319 ORTHO05D006922 1.7e-61 239.2 122 100.0
PGSC0003DMG400000987 Solanum tuberosum HOM05D014319 ORTHO05D006922 2.1e-48 195.7 121 86.0
Sopen11g002160 Solanum pennellii HOM05D014319 ORTHO05D006922 2.9e-45 185.3 120 81.7
Solyc11g006240.2 Solanum lycopersicum HOM05D014319 ORTHO05D006922 5.1e-42 174.5 120 77.5
Peaxi162Scf00519g00016 Petunia axillaris HOM05D014319 ORTHO05D006922 1.7e-29 132.9 113 63.7
Nitab4.5_0005247g0020 Nicotiana tabacum HOM05D014319 ORTHO05D006922 1.1e-28 130.2 126 61.9
Nitab4.5_0006331g0020 Nicotiana tabacum HOM05D014319 ORTHO05D006922 5.4e-20 101.3 65 80.0
Dinv30121 Davidia involucrata HOM05D007517 ORTHO05D006922 3.1e-15 85.5 93 54.8
Cpa.g.sc162.5 Carica papaya HOM05D007517 ORTHO05D006922 5.8e-14 81.3 112 44.6
Solyc05g055080.2 Solanum lycopersicum HOM05D014319 ORTHO05D006922 7.6e-14 80.9 72 55.6
Rhsim05G0176100 Rhododendron simsii HOM05D007517 ORTHO05D006922 3.8e-13 78.6 111 47.7
Oeu016033.1 Olea europaea HOM05D014319 ORTHO05D006922 2.7e-11 72.4 107 43.0
Rhsim05G0177900 Rhododendron simsii HOM05D007517 ORTHO05D006922 6.0e-11 71.2 111 44.1
Aqoxy5G00299 Aquilegia oxysepala HOM05D007517 ORTHO05D006922 1.8e-10 69.7 106 38.7
Potri.019G013000 Populus trichocarpa HOM05D007517 ORTHO05D006922 1.8e-10 69.7 113 39.8
Dinv05722 Davidia involucrata HOM05D003159 ORTHO05D003780 2.3e-10 69.3 93 53.8
Potri.019G012400 Populus trichocarpa HOM05D007517 ORTHO05D006922 3.9e-10 68.6 113 38.1
Sc05g0000830 Simmondsia chinensis HOM05D007517 ORTHO05D006922 1.5e-09 66.6 112 35.7
COL.COLO4_15407 Corchorus olitorius HOM05D007517 ORTHO05D006922 1.9e-09 66.2 113 40.7
Dinv44645 Davidia involucrata HOM05D007517 ORTHO05D006922 1.9e-09 66.2 104 43.3
Migut.F00819 Erythranthe guttata HOM05D014319 ORTHO05D006922 1.9e-09 66.2 113 38.1
Gohir.A13G169025 Gossypium hirsutum HOM05D007517 ORTHO05D006922 3.3e-09 65.5 111 42.3
DCAR_002343 Daucus carota HOM05D007517 ORTHO05D006922 5.6e-09 64.7 100 40.0
Lj1g0011629 Lotus japonicus HOM05D007517 ORTHO05D006922 9.6e-09 63.9 116 38.8
Gorai.013G186200 Gossypium raimondii HOM05D007517 ORTHO05D006922 1.3e-08 63.5 121 38.8
Thecc.05G277600 Theobroma cacao HOM05D007517 ORTHO05D006922 2.8e-08 62.4 72 48.6
Potri.019G012700 Populus trichocarpa HOM05D007517 ORTHO05D006922 4.8e-08 61.6 113 37.2
Potri.013G043600 Populus trichocarpa HOM05D007517 ORTHO05D006922 8.1e-08 60.8 113 37.2
Phvul.006G103600 Phaseolus vulgaris HOM05D007517 ORTHO05D006922 1.8e-07 59.7 72 45.8
TAR636G0129 Trochodendron aralioides HOM05D007517 ORTHO05D006922 2.4e-07 59.3 61 52.5
QL10p016305 Quercus lobata HOM05D007517 ORTHO05D006922 3.1e-07 58.9 66 50.0
FvH4_6g02480 Fragaria vesca HOM05D017677 ORTHO05D006922 4.0e-07 58.5 117 35.9
FAN02G2589 Fragaria x ananassa HOM05D017677 ORTHO05D006922 4.0e-07 58.5 116 37.9
FAN14G2793 Fragaria x ananassa HOM05D017677 ORTHO05D006922 4.0e-07 58.5 117 35.9
Glyma.03G248900 Glycine max HOM05D007517 ORTHO05D006922 6.9e-07 57.8 70 45.7
Sed0011700 Sechium edule HOM05D007517 ORTHO05D006922 9.0e-07 57.4 72 44.4
FAN14G4694 Fragaria x ananassa HOM05D017677 ORTHO05D006922 1.2e-06 57.0 117 35.9
QL10p016371 Quercus lobata HOM05D007517 ORTHO05D006922 1.2e-06 57.0 69 44.9
COL.COLO4_05587 Corchorus olitorius HOM05D007517 ORTHO05D006922 1.5e-06 56.6 85 41.2
QL10p016395 Quercus lobata HOM05D007517 ORTHO05D006922 1.5e-06 56.6 69 44.9
TAR362G0007 Trochodendron aralioides HOM05D007967 ORTHO05D008195 1.5e-06 56.6 100 38.0
Manes.15G037400 Manihot esculenta HOM05D007967 ORTHO05D008195 2.0e-06 56.2 110 37.3
Atru.chr5.1625 Acer truncatum HOM05D007517 ORTHO05D006922 2.6e-06 55.8 69 46.4
Haze_24578 Corylus avellana HOM05D007517 ORTHO05D006922 2.6e-06 55.8 65 52.3
Cfa002378 Carpinus fangiana HOM05D007517 ORTHO05D006922 3.4e-06 55.5 71 47.9
CsaV3_2G003890 Cucumis sativus L. HOM05D017963 ORTHO05D020474 3.4e-06 55.5 114 37.7
Duzib133G0625 Durio zibethinus HOM05D007517 ORTHO05D006922 3.4e-06 55.5 107 38.3
Glyma.19G246500 Glycine max HOM05D007517 ORTHO05D006922 3.4e-06 55.5 70 45.7
Gohir.A08G216801 Gossypium hirsutum HOM05D007517 ORTHO05D006922 3.4e-06 55.5 74 52.7
QL10p016326 Quercus lobata HOM05D007517 ORTHO05D006922 3.4e-06 55.5 69 43.5
Atru.chr2.873 Acer truncatum HOM05D007517 ORTHO05D006922 4.5e-06 55.1 73 47.9
Gohir.D08G233850 Gossypium hirsutum HOM05D007517 ORTHO05D006922 7.6e-06 54.3 76 44.7
Gorai.004G248500 Gossypium raimondii HOM05D007517 ORTHO05D006922 7.6e-06 54.3 76 44.7
Sed0018312 Sechium edule HOM05D007517 ORTHO05D006922 7.6e-06 54.3 72 41.7
ClCG07G000800 Citrullus lanatus HOM05D007517 ORTHO05D006922 1.0e-05 53.9 80 45.0
Thecc.01G263600 Theobroma cacao HOM05D007517 ORTHO05D006922 1.0e-05 53.9 118 38.1


User provided reference genes

Program Settings