Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1252.3 Capsicum annuum HOM05D005921 ORTHO05D007374 1.1e-289 999.2 487 100.0
Sopen04g027990 Solanum pennellii HOM05D005921 ORTHO05D007374 3.4e-267 924.5 485 92.0
Solyc04g072010.3 Solanum lycopersicum HOM05D005921 ORTHO05D007374 3.2e-265 917.9 485 91.5
Peaxi162Scf00360g00056 Petunia axillaris HOM05D005921 ORTHO05D007374 2.8e-237 825.1 479 83.9
Nitab4.5_0000099g0240 Nicotiana tabacum HOM05D005921 ORTHO05D007374 1.3e-202 709.9 540 68.9
Cc10_g15280 Coffea canephora HOM05D005921 ORTHO05D007374 2.1e-200 702.6 502 68.5
Rhsim11G0087800 Rhododendron simsii HOM05D005921 ORTHO05D007374 1.9e-196 689.5 496 69.2
Hma1.2p1_0358F.1_g134840 Hydrangea macrophylla HOM05D005921 ORTHO05D007374 6.6e-194 681.0 499 67.9
vmacro01494 Vaccinium macrocarpon HOM05D005921 ORTHO05D007374 9.9e-190 667.2 477 69.4
GSVIVG01001409001 Vitis vinifera HOM05D005921 ORTHO05D007374 1.9e-188 662.9 492 67.1
Thecc.08G159700 Theobroma cacao HOM05D005921 ORTHO05D007374 1.7e-186 656.4 489 65.0
Potri.005G197000 Populus trichocarpa HOM05D005921 ORTHO05D007374 1.9e-185 652.9 496 65.9
CSS0006668 Camellia sinensis var. sinensis HOM05D005921 ORTHO05D007374 1.6e-184 649.8 439 71.8
MSTRG.24492 Avicennia marina HOM05D005921 ORTHO05D007374 1.8e-183 646.4 493 65.5
Lj5g0014499 Lotus japonicus HOM05D005921 ORTHO05D007374 1.8e-183 646.4 496 63.5
Migut.N02950 Erythranthe guttata HOM05D005921 ORTHO05D007374 6.9e-183 644.4 456 69.1
Eucgr.F04188 Eucalyptus grandis HOM05D005921 ORTHO05D007374 4.5e-182 641.7 500 63.6
CiPaw.15G012300 Carya illinoinensis HOM05D005921 ORTHO05D007374 4.9e-181 638.3 470 65.3
Manes.02G183400 Manihot esculenta HOM05D005921 ORTHO05D007374 8.4e-181 637.5 486 65.6
HanXRQChr02g0042431 Helianthus annuus HOM05D005921 ORTHO05D007374 4.2e-180 635.2 484 65.3
Cfa018279 Carpinus fangiana HOM05D005921 ORTHO05D007374 1.2e-179 633.6 455 67.5
Glyma.20G170200 Glycine max HOM05D005921 ORTHO05D007374 2.1e-179 632.9 493 62.7
Gorai.009G286300 Gossypium raimondii HOM05D005921 ORTHO05D007374 2.7e-179 632.5 496 63.9
Atru.chr13.2001 Acer truncatum HOM05D005921 ORTHO05D007374 1.3e-178 630.2 461 67.0
Lalb_Chr06g0161731 Lupinus albus HOM05D005921 ORTHO05D007374 1.8e-178 629.8 484 63.0
Psat0s899g0040 Pisum sativum HOM05D005921 ORTHO05D007374 3.9e-178 628.6 489 62.6
RcHm_v2.0_Chr6g0274201 Rosa chinensis HOM05D005921 ORTHO05D007374 3.9e-178 628.6 487 65.1
MSTRG.22109 Avicennia marina HOM05D005921 ORTHO05D007374 5.1e-178 628.2 486 64.0
MBI01_g34168_MAGBIO Magnolia biondii HOM05D005921 ORTHO05D007374 5.1e-178 628.2 491 61.7
Glyma.10G221400 Glycine max HOM05D005921 ORTHO05D007374 6.7e-178 627.9 499 62.9
TAR381G0629 Trochodendron aralioides HOM05D005921 ORTHO05D007374 1.9e-177 626.3 480 64.6
Gohir.A05G270866 Gossypium hirsutum HOM05D005921 ORTHO05D007374 2.5e-177 625.9 465 66.2
Medtr1g097955 Medicago truncatula HOM05D005921 ORTHO05D007374 4.3e-177 625.2 481 64.7
arahy.Tifrunner.gnm1.ann1.9JVG50 Arachis hypogaea HOM05D005921 ORTHO05D007374 5.6e-177 624.8 493 62.5
Ca_10662_v3 Cicer arietinum L. HOM05D005921 ORTHO05D007374 9.6e-177 624.0 499 62.1
MD05G1033700 Malus domestica HOM05D005921 ORTHO05D007374 9.6e-177 624.0 479 66.0
Nitab4.5_0013157g0020 Nicotiana tabacum HOM05D005921 ORTHO05D007374 1.3e-176 623.6 427 74.0
Duzib116G0900 Durio zibethinus HOM05D005921 ORTHO05D007374 1.6e-176 623.2 429 67.1
TPR.G17011 Trifolium pratense HOM05D005921 ORTHO05D007374 2.8e-176 622.5 492 63.0
Lsat_1_v5_gn_1_5181 Lactuca sativa HOM05D005921 ORTHO05D007374 4.8e-176 621.7 497 63.6
arahy.Tifrunner.gnm1.ann1.TV90AE Arachis hypogaea HOM05D005921 ORTHO05D007374 1.4e-175 620.2 457 64.8
Eucgr.L02800 Eucalyptus grandis HOM05D005921 ORTHO05D007374 1.8e-175 619.8 538 58.6
CANSAT25G0895 Cannabis sativa HOM05D005921 ORTHO05D007374 2.4e-175 619.4 492 61.0
CsaV3_6G004990 Cucumis sativus L. HOM05D005921 ORTHO05D007374 4.0e-175 618.6 488 62.5
Lalb_Chr02g0141581 Lupinus albus HOM05D005921 ORTHO05D007374 5.3e-175 618.2 450 65.8
unitig_578.g16229 Utricularia gibba HOM05D005921 ORTHO05D007374 1.5e-174 616.7 418 68.2
VMungo0720G0456 Vigna mungo HOM05D005921 ORTHO05D007374 1.5e-174 616.7 501 61.7
TWI32G1095 Tripterygium wilfordii HOM05D005921 ORTHO05D007374 4.5e-174 615.1 511 61.3
Prupe.8G040700 Prunus persica HOM05D005921 ORTHO05D007374 5.8e-174 614.8 478 64.4
AL2G31250 Arabidopsis lyrata HOM05D005921 ORTHO05D007374 2.9e-173 612.5 477 62.3
FAN24G0054 Fragaria x ananassa HOM05D005921 ORTHO05D007374 3.8e-173 612.1 474 63.7
Sp5g26720 Schrenkiella parvula HOM05D005921 ORTHO05D007374 3.8e-173 612.1 494 61.1
AT1G71696 Arabidopsis thaliana HOM05D005921 ORTHO05D007374 4.9e-173 611.7 501 61.7
Carub.0002s1845 Capsella rubella HOM05D005921 ORTHO05D007374 8.4e-173 610.9 501 60.9
COL.COLO4_13778 Corchorus olitorius HOM05D005921 ORTHO05D007374 1.1e-172 610.5 536 58.4
Aa31LG4G8950 Aethionema arabicum HOM05D005921 ORTHO05D007374 1.4e-172 610.1 495 60.2
Ciclev10003457m.g Citrus clementina HOM05D005921 ORTHO05D007374 1.9e-172 609.8 431 68.0
PGR044G0568 Punica granatum HOM05D005921 ORTHO05D007374 4.2e-172 608.6 439 66.7
Sc02g0003820 Simmondsia chinensis HOM05D005921 ORTHO05D007374 9.3e-172 607.4 379 73.4
ClCG08G007340 Citrullus lanatus HOM05D005921 ORTHO05D007374 1.2e-171 607.1 480 62.3
BcaB05g24658 Brassica carinata HOM05D005921 ORTHO05D007374 2.1e-171 606.3 469 63.1
FvH4_2g13020 Fragaria vesca HOM05D005921 ORTHO05D007374 3.5e-171 605.5 474 63.1
SalBow6G1744 Salvia bowleyana HOM05D005921 ORTHO05D007374 6.0e-171 604.7 490 61.0
ECA247G3881 Erigeron canadensis HOM05D005921 ORTHO05D007374 1.3e-170 603.6 385 74.5
Thhalv10018610m.g Eutrema salsugineum HOM05D005921 ORTHO05D007374 2.3e-170 602.8 424 66.3
EL10Ac1g01606 Beta vulgaris HOM05D005921 ORTHO05D007374 3.9e-170 602.1 453 63.1
Aqoxy6G00427 Aquilegia oxysepala HOM05D005921 ORTHO05D007374 2.5e-169 599.4 500 59.8
BcaC03g15284 Brassica carinata HOM05D005921 ORTHO05D007374 1.3e-168 597.0 489 61.3
A02p17260 Brassica napus HOM05D005921 ORTHO05D007374 1.3e-168 597.0 489 60.9
Sed0007537 Sechium edule HOM05D005921 ORTHO05D007374 1.4e-167 593.6 495 59.8
C02p28900 Brassica napus HOM05D005921 ORTHO05D007374 3.4e-166 589.0 505 59.6
Lj7A383T42 Lonicera japonica HOM05D005921 ORTHO05D007374 4.5e-166 588.6 437 67.7
FAN27G2380 Fragaria x ananassa HOM05D005921 ORTHO05D007374 1.7e-165 586.6 495 60.2
PSO675G2388 Papaver somniferum HOM05D005921 ORTHO05D007374 1.7e-165 586.6 491 60.5
Hund26678 Selenicereus undatus HOM05D005921 ORTHO05D007374 4.6e-163 578.6 465 61.5
Lj4A704G63 Lonicera japonica HOM05D005921 ORTHO05D007374 6.1e-163 578.2 404 69.6
CDE04G2034 Ceratophyllum demersum HOM05D005921 ORTHO05D007374 1.0e-162 577.4 486 59.9
Phvul.007G083600 Phaseolus vulgaris HOM05D005921 ORTHO05D007374 1.9e-161 573.2 404 67.3
CARHR291100 Cardamine hirsuta HOM05D005921 ORTHO05D007374 5.7e-161 571.6 400 67.2
Gohir.D05G273101 Gossypium hirsutum HOM05D005921 ORTHO05D007374 7.4e-161 571.2 496 59.3
Ah.05g168190 Amaranthus hybridus HOM05D005921 ORTHO05D007374 1.4e-156 557.0 395 66.3
MELO3C019977.2 Cucumis melo HOM05D005921 ORTHO05D007374 9.4e-156 554.3 379 69.4
Zm00001eb377250 Zea mays HOM05D005921 ORTHO05D007374 2.1e-155 553.1 467 57.0
SGA_v2.0_scaffold54G19682 Striga asiatica HOM05D005921 ORTHO05D007374 4.6e-155 552.0 452 60.6
FAN15G3525 Fragaria x ananassa HOM05D005921 ORTHO05D007374 6.1e-155 551.6 498 57.0
Nn5g28835 Nelumbo nucifera HOM05D005921 ORTHO05D007374 7.4e-153 544.7 484 57.2
AUR62034891 Chenopodium quinoa HOM05D005921 ORTHO05D007374 4.8e-152 542.0 403 65.3
Hma1.2p1_0358F.1_g134830 Hydrangea macrophylla HOM05D005921 ORTHO05D007374 2.5e-148 529.6 362 71.0
ATR1120G060 Amborella trichopoda HOM05D004165 ORTHO05D005063 4.7e-147 525.4 381 63.8
Sabra05G0149900 Salix brachista HOM05D005921 ORTHO05D007374 4.7e-147 525.4 491 57.4
DCAR_001188 Daucus carota HOM05D005921 ORTHO05D007374 2.3e-146 523.1 328 75.0
FAN20G2564 Fragaria x ananassa HOM05D005921 ORTHO05D007374 3.2e-140 502.7 496 54.0
AUR62026635 Chenopodium quinoa HOM05D005921 ORTHO05D007374 2.8e-136 489.6 392 61.2
SMO116G0063 Selaginella moellendorffii HOM05D005921 ORTHO05D007374 1.3e-128 464.2 417 54.0
Mapoly0096s0032 Marchantia polymorpha HOM05D005921 ORTHO05D007374 1.6e-126 457.2 406 54.7
HPP92_000681 Vanilla planifolia HOM05D005921 ORTHO05D007374 3.2e-124 449.5 365 62.2
Cpa.g.sc26.80 Carica papaya HOM05D005921 ORTHO05D007374 4.2e-124 449.1 327 65.1
AagrBONN_evm.TU.Sc2ySwM_344.3190 Anthoceros agrestis HOM05D005921 ORTHO05D007374 4.7e-123 445.7 359 55.2
Ciclev10003529m.g Citrus clementina HOM05D005921 ORTHO05D007374 5.9e-118 428.7 386 57.0
Pp3c16_14030 Physcomitrium patens HOM05D005921 ORTHO05D007374 2.3e-117 426.8 330 57.3
Haze_17806 Corylus avellana HOM05D005921 ORTHO05D007374 5.9e-110 402.1 268 70.9
HPP92_000638 Vanilla planifolia HOM05D005921 ORTHO05D007374 8.3e-96 355.1 311 55.9
CBR_g30849 Chara braunii HOM05D005921 ORTHO05D007374 8.1e-91 338.6 350 45.7
Oeu017621.1 Olea europaea HOM05D005921 ORTHO05D007374 5.8e-89 332.4 179 82.1
QL02p037460 Quercus lobata HOM05D005921 ORTHO05D007374 5.8e-89 332.4 246 65.9
QL02p037958 Quercus lobata HOM05D005921 ORTHO05D007374 7.6e-89 332.0 246 65.9
Pp3c6_12100 Physcomitrium patens HOM05D005921 ORTHO05D007374 2.9e-88 330.1 394 44.7
QL02p037446 Quercus lobata HOM05D005921 ORTHO05D007374 6.6e-85 318.9 240 64.6
QL02p037946 Quercus lobata HOM05D005921 ORTHO05D007374 6.6e-85 318.9 240 64.6
SHI09099 Sapria himalayana HOM05D005921 ORTHO05D007374 4.3e-84 316.2 285 56.5
BolC2t08937H Brassica oleracea HOM05D005921 ORTHO05D007374 1.4e-82 311.2 248 64.1
BraA02t06774Z Brassica rapa HOM05D005921 ORTHO05D007374 3.1e-82 310.1 248 63.3
MCO15G195 Micromonas commoda HOM05D005921 ORTHO05D007374 2.9e-72 276.9 374 39.6
PRCOL_00005633 Prasinoderma coloniale HOM05D005921 ORTHO05D007374 3.8e-64 250.0 330 40.0
BraA02t06773Z Brassica rapa HOM05D005921 ORTHO05D007374 1.1e-60 238.4 225 54.2
BolC2t08936H Brassica oleracea HOM05D005921 ORTHO05D007374 3.3e-60 236.9 232 53.4
Os06g0144600 Oryza sativa ssp. japonica HOM05D005921 ORTHO05D007374 5.8e-57 226.1 134 77.6
Zm00001eb035610 Zea mays HOM05D005921 ORTHO05D007374 2.7e-54 217.2 134 74.6
SEGI_33860 Sequoiadendron giganteum HOM05D005921 ORTHO05D007374 1.9e-52 211.1 168 60.1
Zm00001eb246880 Zea mays HOM05D005921 ORTHO05D007374 3.7e-43 180.3 106 76.4
SEGI_16149 Sequoiadendron giganteum HOM05D005921 ORTHO05D007374 1.8e-37 161.4 98 70.4
Cre07.g335900 Chlamydomonas reinhardtii HOM05D005921 ORTHO05D007374 9.7e-36 155.6 310 33.5
SHI09097 Sapria himalayana HOM05D005921 ORTHO05D007374 1.0e-32 145.6 92 72.8
Cre06.g309450 Chlamydomonas reinhardtii HOM05D005921 ORTHO05D007374 1.6e-30 138.3 339 30.4
Duzib093G1718 Durio zibethinus HOM05D005921 ORTHO05D007374 1.8e-29 134.8 73 79.5
MD10G1034600 Malus domestica HOM05D005921 ORTHO05D007374 1.8e-21 108.2 125 46.4
Pp3c27_7150 Physcomitrium patens HOM05D005921 ORTHO05D007374 2.2e-19 101.3 377 25.7
Zm00001eb035620 Zea mays HOM05D005921 ORTHO05D007374 3.7e-19 100.5 55 74.5
Sabra02G0051300 Salix brachista HOM05D005921 ORTHO05D007374 1.8e-10 71.6 107 47.7


User provided reference genes

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