Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1248.7 Capsicum annuum HOM05D015457 ORTHO05D020327 4.1e-212 741.1 366 100.0
Solyc01g102320.2 Solanum lycopersicum HOM05D015457 ORTHO05D020327 1.3e-72 277.7 316 48.1
PGSC0003DMG400017974 Solanum tuberosum HOM05D015457 ORTHO05D020327 1.6e-46 191.0 168 56.0
Peaxi162Scf01051g00144 Petunia axillaris HOM05D015457 ORTHO05D020327 7.8e-38 162.2 358 35.5
Lj5C336T5 Lonicera japonica HOM05D007560 ORTHO05D005947 6.6e-21 105.9 310 24.5
Lj5C336G7 Lonicera japonica HOM05D007560 ORTHO05D005947 1.1e-20 105.1 287 26.8
Lj5C338T12 Lonicera japonica HOM05D007560 ORTHO05D005947 1.1e-18 98.6 272 27.2
Nitab4.5_0001737g0020 Nicotiana tabacum HOM05D007560 ORTHO05D005947 2.4e-18 97.4 309 26.2
Rhsim11G0104000 Rhododendron simsii HOM05D007560 ORTHO05D005947 1.5e-17 94.7 270 25.2
Aqoxy5G01909 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 2.6e-17 94.0 371 27.5
Rhsim11G0103500 Rhododendron simsii HOM05D007560 ORTHO05D005947 9.9e-17 92.0 270 24.8
Dinv30955 Davidia involucrata HOM05D008691 ORTHO05D005947 1.7e-16 91.3 254 28.7
Lj5C336T6 Lonicera japonica HOM05D007560 ORTHO05D005947 1.7e-16 91.3 273 28.2
Sopen01g044770 Solanum pennellii HOM05D015457 ORTHO05D020327 3.8e-16 90.1 82 48.8
Rhsim11G0103700 Rhododendron simsii HOM05D007560 ORTHO05D005947 8.4e-16 89.0 270 24.4
Lj6C390T13 Lonicera japonica HOM05D007560 ORTHO05D005947 1.4e-15 88.2 277 27.1
Rhsim11G0104400 Rhododendron simsii HOM05D007560 ORTHO05D005947 1.4e-15 88.2 358 23.7
CSS0008734 Camellia sinensis var. sinensis HOM05D007560 ORTHO05D005947 4.2e-15 86.7 222 28.4
Lj6C625T6 Lonicera japonica HOM05D007560 ORTHO05D005947 4.2e-15 86.7 274 27.4
CSS0014327 Camellia sinensis var. sinensis HOM05D007560 ORTHO05D005947 5.4e-15 86.3 222 28.4
Lj8C356T1 Lonicera japonica HOM05D007560 ORTHO05D005947 5.4e-15 86.3 299 26.4
Lj8P356T21 Lonicera japonica HOM05D007560 ORTHO05D005947 1.2e-14 85.1 257 27.6
Nitab4.5_0008600g0030 Nicotiana tabacum HOM05D015457 ORTHO05D020327 1.6e-14 84.7 172 34.3
Nitab4.5_0001058g0060 Nicotiana tabacum HOM05D007560 ORTHO05D005947 2.1e-14 84.3 283 26.1
CSS0008666 Camellia sinensis var. sinensis HOM05D007560 ORTHO05D005947 2.7e-14 84.0 222 27.9
CSS0006319 Camellia sinensis var. sinensis HOM05D007560 ORTHO05D005947 3.5e-14 83.6 227 29.5
Lj5C320G6 Lonicera japonica HOM05D007560 ORTHO05D005947 1.0e-13 82.0 264 23.9
Peaxi162Scf00408g00045 Petunia axillaris HOM05D007560 ORTHO05D005947 1.3e-13 81.6 283 24.4
Lj8C38T12 Lonicera japonica HOM05D007560 ORTHO05D005947 3.0e-13 80.5 260 26.2
Actinidia16920 Actinidia chinensis HOM05D007560 ORTHO05D005947 5.1e-13 79.7 175 27.4
CSS0006449 Camellia sinensis var. sinensis HOM05D007560 ORTHO05D005947 5.1e-13 79.7 226 28.8
Cc02_g35550 Coffea canephora HOM05D007560 ORTHO05D005947 1.5e-12 78.2 262 27.5
Peaxi162Scf00191g01113 Petunia axillaris HOM05D007560 ORTHO05D005947 1.9e-12 77.8 264 22.0
Nitab4.5_0006682g0020 Nicotiana tabacum HOM05D007560 ORTHO05D005947 3.3e-12 77.0 266 23.7
Nitab4.5_0005276g0020 Nicotiana tabacum HOM05D015457 ORTHO05D020327 9.6e-12 75.5 144 37.5
Migut.B00678 Erythranthe guttata HOM05D007560 ORTHO05D005947 1.3e-11 75.1 253 24.9
Migut.B00756 Erythranthe guttata HOM05D007560 ORTHO05D005947 1.3e-11 75.1 253 24.9
Rhsim11G0104200 Rhododendron simsii HOM05D007560 ORTHO05D005947 2.1e-11 74.3 270 23.3
Migut.B00757 Erythranthe guttata HOM05D007560 ORTHO05D005947 3.6e-11 73.6 248 24.2
Aqoxy5G04188 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 6.2e-11 72.8 194 26.8
Nitab4.5_0000005g0280 Nicotiana tabacum HOM05D007560 ORTHO05D005947 6.2e-11 72.8 271 22.9
Hund19676 Selenicereus undatus HOM05D007560 ORTHO05D005947 3.1e-10 70.5 308 24.4
COL.COLO4_33377 Corchorus olitorius HOM05D007560 ORTHO05D005947 5.3e-10 69.7 279 23.3
Nitab4.5_0001634g0020 Nicotiana tabacum HOM05D007560 ORTHO05D005947 6.9e-10 69.3 213 23.9
Aqoxy5G01432 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 2.6e-09 67.4 175 29.1
Rhsim11G0103900 Rhododendron simsii HOM05D007560 ORTHO05D005947 3.4e-09 67.0 158 24.7
Eucgr.H04775 Eucalyptus grandis HOM05D007560 ORTHO05D005947 5.8e-09 66.2 155 26.5
Aqoxy2G00132 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 1.3e-08 65.1 296 23.3
Aqoxy5G01978 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 3.8e-08 63.5 181 29.3
COL.COLO4_32922 Corchorus olitorius HOM05D007560 ORTHO05D005947 3.8e-08 63.5 349 21.8
Aqoxy5G01975 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 6.4e-08 62.8 229 24.9
Lj5C338T9 Lonicera japonica HOM05D007560 ORTHO05D005947 6.4e-08 62.8 142 31.0
Peaxi162Scf00598g00085 Petunia axillaris HOM05D007560 ORTHO05D005947 1.1e-07 62.0 169 23.7
CAN.G135.62 Capsicum annuum HOM05D007560 ORTHO05D005947 1.4e-07 61.6 358 22.3
Nitab4.5_0000800g0010 Nicotiana tabacum HOM05D007560 ORTHO05D005947 1.6e-06 58.2 137 28.5
Lj5C338T11 Lonicera japonica HOM05D007560 ORTHO05D005947 2.1e-06 57.8 165 25.5
CAN.G135.61 Capsicum annuum HOM05D007560 ORTHO05D005947 2.7e-06 57.4 207 22.2


User provided reference genes

Program Settings