Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1248.15 Capsicum annuum HOM05D002165 ORTHO05D001531 1.2e-64 249.6 115 100.0
Solyc01g101260.2 Solanum lycopersicum HOM05D002165 ORTHO05D001531 1.2e-29 133.3 76 85.5
Sopen01g044710 Solanum pennellii HOM05D002165 ORTHO05D001531 1.2e-29 133.3 76 85.5
Peaxi162Scf00194g00002 Petunia axillaris HOM05D002165 ORTHO05D001531 5.1e-28 127.9 76 77.6
Nitab4.5_0002516g0010 Nicotiana tabacum HOM05D002165 ORTHO05D001531 9.6e-27 123.6 78 75.6
Nitab4.5_0005662g0010 Nicotiana tabacum HOM05D002165 ORTHO05D001531 9.6e-27 123.6 78 76.9
Nitab4.5_0000800g0060 Nicotiana tabacum HOM05D002165 ORTHO05D001531 4.6e-21 104.8 71 70.4
Nitab4.5_0003573g0030 Nicotiana tabacum HOM05D002165 ORTHO05D001531 4.6e-21 104.8 71 70.4
Nitab4.5_0003573g0040 Nicotiana tabacum HOM05D002165 ORTHO05D001531 4.6e-21 104.8 71 70.4
PGSC0003DMG400018282 Solanum tuberosum HOM05D002165 ORTHO05D001531 5.7e-19 97.8 60 76.7
Actinidia17737 Actinidia chinensis HOM05D002165 ORTHO05D001531 6.3e-18 94.4 125 47.2
Nitab4.5_0003573g0050 Nicotiana tabacum HOM05D002165 ORTHO05D001531 8.2e-18 94.0 70 65.7
Cc02_g35880 Coffea canephora HOM05D002165 ORTHO05D001531 4.5e-16 88.2 68 60.3
Migut.B00883 Erythranthe guttata HOM05D002165 ORTHO05D001531 1.6e-13 79.7 71 50.7
Migut.N00975 Erythranthe guttata HOM05D002165 ORTHO05D001531 1.8e-12 76.3 71 50.7
ECA240G3242 Erigeron canadensis HOM05D002165 ORTHO05D001531 3.9e-12 75.1 75 52.0
CSS0027376 Camellia sinensis var. sinensis HOM05D002165 ORTHO05D001531 8.8e-12 73.9 61 55.7
Lsat_1_v5_gn_7_63880 Lactuca sativa HOM05D002165 ORTHO05D001531 1.5e-11 73.2 74 48.6
ECA236G1383 Erigeron canadensis HOM05D002165 ORTHO05D001531 2.5e-11 72.4 71 46.5
FAN02G1676 Fragaria x ananassa HOM05D002165 ORTHO05D001531 5.7e-11 71.2 61 52.5
FAN05G4164 Fragaria x ananassa HOM05D002165 ORTHO05D001531 5.7e-11 71.2 61 52.5
FAN09G0584 Fragaria x ananassa HOM05D002165 ORTHO05D001531 5.7e-11 71.2 61 52.5
Oeu000103.1 Olea europaea HOM05D008018 ORTHO05D001531 5.7e-11 71.2 76 53.9
DCAR_001884 Daucus carota HOM05D002165 ORTHO05D001531 1.3e-10 70.1 74 43.2
Dinv24517 Davidia involucrata HOM05D002165 ORTHO05D001531 1.3e-10 70.1 109 34.9
Lsat_1_v5_gn_9_85041 Lactuca sativa HOM05D002165 ORTHO05D001531 1.3e-10 70.1 71 43.7
ECA240G0021 Erigeron canadensis HOM05D002165 ORTHO05D001531 1.7e-10 69.7 74 45.9
Lsat_1_v5_gn_7_63540 Lactuca sativa HOM05D002165 ORTHO05D001531 2.2e-10 69.3 75 48.0
DCAR_001887 Daucus carota HOM05D002165 ORTHO05D001531 2.8e-10 68.9 69 43.5
Oeu061905.1 Olea europaea HOM05D002165 ORTHO05D001531 2.8e-10 68.9 65 47.7
Oeu062787.1 Olea europaea HOM05D002165 ORTHO05D001531 2.8e-10 68.9 69 52.2
Prupe.6G304300 Prunus persica HOM05D002165 ORTHO05D001531 2.8e-10 68.9 61 54.1
ECA240G1387 Erigeron canadensis HOM05D002165 ORTHO05D001531 3.7e-10 68.6 74 45.9
FvH4_6g08530 Fragaria vesca HOM05D002165 ORTHO05D001531 3.7e-10 68.6 61 50.8
FAN14G5435 Fragaria x ananassa HOM05D002165 ORTHO05D001531 3.7e-10 68.6 61 50.8
Lsat_1_v5_gn_7_63581 Lactuca sativa HOM05D002165 ORTHO05D001531 3.7e-10 68.6 70 47.1
Lalb_Chr12g0200511 Lupinus albus HOM05D002165 ORTHO05D001531 4.8e-10 68.2 64 53.1
DCAR_002292 Daucus carota HOM05D002165 ORTHO05D001531 6.3e-10 67.8 69 42.0
CSS0044388 Camellia sinensis var. sinensis HOM05D002165 ORTHO05D001531 1.1e-09 67.0 76 47.4
ECA236G2737 Erigeron canadensis HOM05D002165 ORTHO05D001531 1.1e-09 67.0 71 45.1
ECA240G3359 Erigeron canadensis HOM05D002165 ORTHO05D001531 1.1e-09 67.0 72 45.8
Lsat_1_v5_gn_7_63620 Lactuca sativa HOM05D002165 ORTHO05D001531 1.8e-09 66.2 71 46.5
Lalb_Chr07g0181571 Lupinus albus HOM05D002165 ORTHO05D001531 1.8e-09 66.2 63 50.8
Cpa.g.sc48.225 Carica papaya HOM05D002165 ORTHO05D001531 2.4e-09 65.9 62 51.6
ECA240G0866 Erigeron canadensis HOM05D002165 ORTHO05D001531 2.4e-09 65.9 78 43.6
RcHm_v2.0_Chr1g0321401 Rosa chinensis HOM05D002165 ORTHO05D001531 3.1e-09 65.5 60 53.3
Prupe.6G304200 Prunus persica HOM05D002165 ORTHO05D001531 4.1e-09 65.1 63 52.4
Psat4g020920 Pisum sativum HOM05D002165 ORTHO05D001531 5.3e-09 64.7 63 55.6
MD04G1186400 Malus domestica HOM05D002165 ORTHO05D001531 6.9e-09 64.3 61 52.5
DCAR_001885 Daucus carota HOM05D002165 ORTHO05D001531 2.0e-08 62.8 69 42.0
Phvul.003G124200 Phaseolus vulgaris HOM05D002165 ORTHO05D001531 2.0e-08 62.8 62 54.8
DCAR_002291 Daucus carota HOM05D002165 ORTHO05D001531 4.5e-08 61.6 71 46.5
arahy.Tifrunner.gnm1.ann1.1WI4WZ Arachis hypogaea HOM05D008018 ORTHO05D001531 5.9e-08 61.2 63 47.6
arahy.Tifrunner.gnm1.ann1.RMBA11 Arachis hypogaea HOM05D008018 ORTHO05D001531 5.9e-08 61.2 63 47.6
RcHm_v2.0_Chr3g0458591 Rosa chinensis HOM05D002165 ORTHO05D001531 5.9e-08 61.2 75 45.3
DCAR_001886 Daucus carota HOM05D002165 ORTHO05D001531 7.7e-08 60.8 69 39.1
Dinv30952 Davidia involucrata HOM05D002165 ORTHO05D001531 7.7e-08 60.8 51 56.9
Rhsim11G0104900 Rhododendron simsii HOM05D002165 ORTHO05D001531 7.7e-08 60.8 62 51.6
Lsat_1_v5_gn_9_84961 Lactuca sativa HOM05D002165 ORTHO05D001531 1.0e-07 60.5 70 37.1
CSS0004014 Camellia sinensis var. sinensis HOM05D002165 ORTHO05D001531 1.3e-07 60.1 69 46.4
Ciclev10013220m.g Citrus clementina HOM05D002165 ORTHO05D001531 1.3e-07 60.1 63 50.8
BcaNung03907 Brassica carinata HOM05D002165 ORTHO05D001531 1.7e-07 59.7 75 45.3
A06p36950 Brassica napus HOM05D002165 ORTHO05D001531 1.7e-07 59.7 75 45.3
BraA06t26620Z Brassica rapa HOM05D002165 ORTHO05D001531 1.7e-07 59.7 75 45.3
Glyma.13G117400 Glycine max HOM05D002165 ORTHO05D001531 1.7e-07 59.7 59 54.2
QL03p011025 Quercus lobata HOM05D016210 ORTHO05D001531 1.7e-07 59.7 118 32.2
BcaB04g19717 Brassica carinata HOM05D002165 ORTHO05D001531 2.2e-07 59.3 75 44.0
MD16G1133300 Malus domestica HOM05D002165 ORTHO05D001531 2.2e-07 59.3 75 45.3
BcaNung03681 Brassica carinata HOM05D002165 ORTHO05D001531 2.9e-07 58.9 75 45.3
C07p41550 Brassica napus HOM05D002165 ORTHO05D001531 2.9e-07 58.9 75 45.3
BolC7t44687H Brassica oleracea HOM05D002165 ORTHO05D001531 2.9e-07 58.9 75 45.3
ClCG08G002300 Citrullus lanatus HOM05D002165 ORTHO05D001531 2.9e-07 58.9 113 32.7
Eucgr.H01323 Eucalyptus grandis HOM05D002165 ORTHO05D001531 2.9e-07 58.9 57 49.1
Lalb_Chr02g0147531 Lupinus albus HOM05D008018 ORTHO05D001531 2.9e-07 58.9 66 54.5
Lalb_Chr13g0299051 Lupinus albus HOM05D002165 ORTHO05D001531 2.9e-07 58.9 63 46.0
Ciclev10013222m.g Citrus clementina HOM05D002165 ORTHO05D001531 3.8e-07 58.5 63 47.6
THA.LOC104818754 Tarenaya hassleriana HOM05D002165 ORTHO05D001531 3.8e-07 58.5 61 45.9
Lsat_1_v5_gn_9_85080 Lactuca sativa HOM05D002165 ORTHO05D001531 5.0e-07 58.2 70 40.0
Oeu062782.1 Olea europaea HOM05D002165 ORTHO05D001531 5.0e-07 58.2 68 44.1
CARHR186860 Cardamine hirsuta HOM05D002165 ORTHO05D001531 6.5e-07 57.8 75 44.0
Hma1.2p1_0759F.1_g213900 Hydrangea macrophylla HOM05D050867 ORTHO05D001531 6.5e-07 57.8 41 51.2
Hma1.2p1_0759F.1_g213905 Hydrangea macrophylla HOM05D050867 ORTHO05D001531 6.5e-07 57.8 41 51.2
Psat6g153800 Pisum sativum HOM05D008018 ORTHO05D001531 6.5e-07 57.8 63 46.0
BcaC03g17834 Brassica carinata HOM05D002165 ORTHO05D001531 8.5e-07 57.4 75 44.0
BcaNung06223 Brassica carinata HOM05D002165 ORTHO05D001531 8.5e-07 57.4 75 44.0
A02p39040 Brassica napus HOM05D002165 ORTHO05D001531 8.5e-07 57.4 75 44.0
C02p58650 Brassica napus HOM05D002165 ORTHO05D001531 8.5e-07 57.4 75 44.0
BolC2t11925H Brassica oleracea HOM05D002165 ORTHO05D001531 8.5e-07 57.4 75 44.0
BraA02t08873Z Brassica rapa HOM05D002165 ORTHO05D001531 8.5e-07 57.4 75 44.0
ClCG00G002170 Citrullus lanatus HOM05D002165 ORTHO05D001531 8.5e-07 57.4 63 47.6
ClCG08G002310 Citrullus lanatus HOM05D002165 ORTHO05D001531 8.5e-07 57.4 63 47.6
ClCG08G002360 Citrullus lanatus HOM05D002165 ORTHO05D001531 8.5e-07 57.4 63 47.6
Sed0005500 Sechium edule HOM05D002165 ORTHO05D001531 8.5e-07 57.4 62 50.0
BcaB07g29941 Brassica carinata HOM05D002165 ORTHO05D001531 1.1e-06 57.0 75 44.0
MELO3C025017.2 Cucumis melo HOM05D002165 ORTHO05D001531 1.1e-06 57.0 63 47.6
MD13G1137300 Malus domestica HOM05D002165 ORTHO05D001531 1.1e-06 57.0 63 49.2
MELO3C015240.2 Cucumis melo HOM05D002165 ORTHO05D001531 1.4e-06 56.6 65 49.2
CsaV3_6G002670 Cucumis sativus L. HOM05D002165 ORTHO05D001531 1.4e-06 56.6 63 47.6
Eucgr.H01321 Eucalyptus grandis HOM05D002165 ORTHO05D001531 1.4e-06 56.6 62 43.5
Eucgr.H01324 Eucalyptus grandis HOM05D002165 ORTHO05D001531 1.4e-06 56.6 63 46.0
Lj5g0006453 Lotus japonicus HOM05D008018 ORTHO05D001531 1.4e-06 56.6 70 44.3
Lj5g0009947 Lotus japonicus HOM05D008018 ORTHO05D001531 1.4e-06 56.6 70 44.3
MD13G1137400 Malus domestica HOM05D002165 ORTHO05D001531 1.4e-06 56.6 75 44.0
PGR083G0845 Punica granatum HOM05D002165 ORTHO05D001531 1.4e-06 56.6 56 50.0
Sed0022046 Sechium edule HOM05D002165 ORTHO05D001531 1.4e-06 56.6 62 46.8
Thecc.05G329700 Theobroma cacao HOM05D002165 ORTHO05D001531 1.4e-06 56.6 67 47.8
Thecc.09G084900 Theobroma cacao HOM05D002165 ORTHO05D001531 1.4e-06 56.6 64 46.9
Atru.chr12.1534 Acer truncatum HOM05D002165 ORTHO05D001531 1.9e-06 56.2 59 50.8
Atru.chr12.1536 Acer truncatum HOM05D002165 ORTHO05D001531 1.9e-06 56.2 59 50.8
Ca_10202_v3 Cicer arietinum L. HOM05D008018 ORTHO05D001531 1.9e-06 56.2 64 48.4
Ca_10203_v3 Cicer arietinum L. HOM05D008018 ORTHO05D001531 1.9e-06 56.2 64 48.4
TWI12G1307 Tripterygium wilfordii HOM05D002165 ORTHO05D001531 1.9e-06 56.2 70 47.1
CsaV3_1G038050 Cucumis sativus L. HOM05D002165 ORTHO05D001531 2.5e-06 55.8 65 49.2
Thhalv10005460m.g Eutrema salsugineum HOM05D002165 ORTHO05D001531 2.5e-06 55.8 73 45.2
AL6G38560 Arabidopsis lyrata HOM05D002165 ORTHO05D001531 3.2e-06 55.5 75 41.3
Carub.0006s2437 Capsella rubella HOM05D002165 ORTHO05D001531 3.2e-06 55.5 75 41.3
Psat2g102520 Pisum sativum HOM05D008018 ORTHO05D001531 3.2e-06 55.5 63 49.2
Duzib128G1662 Durio zibethinus HOM05D002165 ORTHO05D001531 4.2e-06 55.1 64 43.8
Lj1g0006603 Lotus japonicus HOM05D008018 ORTHO05D001531 4.2e-06 55.1 63 42.9
Lalb_Chr21g0310051 Lupinus albus HOM05D008018 ORTHO05D001531 4.2e-06 55.1 66 53.0
Prupe.1G207900 Prunus persica HOM05D002165 ORTHO05D001531 4.2e-06 55.1 74 41.9
Ca_10205_v3 Cicer arietinum L. HOM05D008018 ORTHO05D001531 5.5e-06 54.7 64 51.6
Ca_21362_v3 Cicer arietinum L. HOM05D002165 ORTHO05D001531 5.5e-06 54.7 63 46.0
Sed0016802 Sechium edule HOM05D002165 ORTHO05D001531 5.5e-06 54.7 64 50.0
Psat6g154040 Pisum sativum HOM05D008018 ORTHO05D001531 7.2e-06 54.3 66 47.0
BcaC04g23632 Brassica carinata HOM05D002165 ORTHO05D001531 9.4e-06 53.9 75 41.3
A09p05720 Brassica napus HOM05D002165 ORTHO05D001531 9.4e-06 53.9 75 41.3
C09p06310 Brassica napus HOM05D002165 ORTHO05D001531 9.4e-06 53.9 75 41.3
BolC9t53551H Brassica oleracea HOM05D002165 ORTHO05D001531 9.4e-06 53.9 75 41.3
BraA09t36213Z Brassica rapa HOM05D002165 ORTHO05D001531 9.4e-06 53.9 75 41.3
Oeu062790.1 Olea europaea HOM05D002165 ORTHO05D001531 9.4e-06 53.9 67 44.8
Psat6g154000 Pisum sativum HOM05D008018 ORTHO05D001531 9.4e-06 53.9 63 47.6


User provided reference genes

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