Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1243.6 Capsicum annuum HOM05D002907 ORTHO05D005554 2.9e-51 204.9 100 100.0
CAN.G1160.4 Capsicum annuum HOM05D002907 ORTHO05D005554 1.6e-41 172.6 98 83.7
CAN.G665.23 Capsicum annuum HOM05D002907 ORTHO05D005554 2.1e-41 172.2 98 83.7
CAN.G181.45 Capsicum annuum HOM05D002907 ORTHO05D005554 3.5e-41 171.4 98 83.7
CAN.G1597.6 Capsicum annuum HOM05D002907 ORTHO05D005554 1.6e-38 162.5 98 81.6
CAN.G509.9 Capsicum annuum HOM05D002907 ORTHO05D005554 1.6e-38 162.5 98 79.6
CAN.G419.22 Capsicum annuum HOM05D002907 ORTHO05D005554 2.6e-36 155.2 90 82.2
CAN.G542.9 Capsicum annuum HOM05D002907 ORTHO05D005554 1.3e-32 142.9 82 82.9
CAN.G98.12 Capsicum annuum HOM05D002907 ORTHO05D005554 1.6e-30 136.0 79 83.5
Sopen06g010830 Solanum pennellii HOM05D002907 ORTHO05D005554 1.6e-30 136.0 90 70.0
Sopen02g003400 Solanum pennellii HOM05D002907 ORTHO05D005554 3.6e-30 134.8 90 70.0
Solyc02g055537.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 6.2e-30 134.0 92 67.4
Nitab4.5_0000162g0050 Nicotiana tabacum HOM05D002907 ORTHO05D005554 2.4e-29 132.1 90 71.1
Nitab4.5_0002548g0050 Nicotiana tabacum HOM05D002907 ORTHO05D005554 1.2e-28 129.8 89 73.0
Nitab4.5_0002746g0010 Nicotiana tabacum HOM05D002907 ORTHO05D005554 7.6e-28 127.1 90 68.9
Solyc02g044000.3 Solanum lycopersicum HOM05D002907 ORTHO05D005554 1.7e-27 125.9 90 65.6
Nitab4.5_0000248g0100 Nicotiana tabacum HOM05D002907 ORTHO05D005554 4.9e-27 124.4 97 63.9
Peaxi162Scf00005g02517 Petunia axillaris HOM05D002907 ORTHO05D005554 3.2e-26 121.7 89 67.4
Peaxi162Scf00386g00927 Petunia axillaris HOM05D002907 ORTHO05D005554 3.2e-26 121.7 89 67.4
Nitab4.5_0026714g0020 Nicotiana tabacum HOM05D002907 ORTHO05D005554 4.2e-26 121.3 89 66.3
Nitab4.5_0002986g0060 Nicotiana tabacum HOM05D002907 ORTHO05D005554 1.6e-25 119.4 90 65.6
CAN.G1418.2 Capsicum annuum HOM05D002907 ORTHO05D005554 2.1e-25 119.0 75 78.7
Sopen01g012720 Solanum pennellii HOM05D002907 ORTHO05D005554 6.0e-25 117.5 90 63.3
Nitab4.5_0000011g0020 Nicotiana tabacum HOM05D002907 ORTHO05D005554 7.8e-25 117.1 90 63.3
Sopen09g023780 Solanum pennellii HOM05D002907 ORTHO05D005554 1.0e-24 116.7 90 62.2
Solyc06g011610.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 3.9e-24 114.8 81 66.7
Sopen11g022000 Solanum pennellii HOM05D002907 ORTHO05D005554 3.9e-24 114.8 90 62.2
PGSC0003DMG400044579 Solanum tuberosum HOM05D002907 ORTHO05D005554 6.6e-24 114.0 91 61.5
Peaxi162Scf00431g00511 Petunia axillaris HOM05D002907 ORTHO05D005554 1.1e-23 113.2 89 64.0
Solyc10g074430.2 Solanum lycopersicum HOM05D002907 ORTHO05D005554 5.6e-23 110.9 90 61.1
Peaxi162Scf00073g02336 Petunia axillaris HOM05D002907 ORTHO05D005554 1.3e-22 109.8 92 63.0
Peaxi162Scf00661g00421 Petunia axillaris HOM05D002907 ORTHO05D005554 1.3e-22 109.8 92 63.0
Peaxi162Scf01370g00020 Petunia axillaris HOM05D002907 ORTHO05D005554 1.3e-22 109.8 92 63.0
Peaxi162Scf00203g01424 Petunia axillaris HOM05D002907 ORTHO05D005554 2.8e-22 108.6 95 60.0
Nitab4.5_0009770g0040 Nicotiana tabacum HOM05D002907 ORTHO05D005554 4.8e-22 107.8 80 67.5
CANSAT35G0321 Cannabis sativa HOM05D002907 ORTHO05D005554 5.8e-20 100.9 90 54.4
CANSAT01G2740 Cannabis sativa HOM05D002907 ORTHO05D005554 9.9e-20 100.1 90 53.3
CANSAT01G3093 Cannabis sativa HOM05D002907 ORTHO05D005554 9.9e-20 100.1 90 53.3
CANSAT56G4249 Cannabis sativa HOM05D002907 ORTHO05D005554 1.1e-18 96.7 90 52.2
Nitab4.5_0000745g0100 Nicotiana tabacum HOM05D002907 ORTHO05D005554 1.4e-18 96.3 80 60.0
Nitab4.5_0000488g0170 Nicotiana tabacum HOM05D002907 ORTHO05D005554 2.7e-17 92.0 70 64.3
DCAR_027158 Daucus carota HOM05D002907 ORTHO05D005554 3.5e-17 91.7 89 52.8
Nitab4.5_0000037g0130 Nicotiana tabacum HOM05D002907 ORTHO05D005554 3.5e-17 91.7 75 58.7
Nitab4.5_0000037g0150 Nicotiana tabacum HOM05D002907 ORTHO05D005554 3.5e-17 91.7 75 62.7
Peaxi162Scf00816g00411 Petunia axillaris HOM05D002907 ORTHO05D005554 3.0e-16 88.6 91 56.0
DCAR_010335 Daucus carota HOM05D002907 ORTHO05D005554 1.1e-15 86.7 92 46.7
Solyc12g038200.3 Solanum lycopersicum HOM05D002700 ORTHO05D003228 1.1e-15 86.7 61 67.2
DCAR_024022 Daucus carota HOM05D002907 ORTHO05D005554 2.1e-14 82.4 90 46.7
Nitab4.5_0008853g0020 Nicotiana tabacum HOM05D002907 ORTHO05D005554 4.8e-14 81.3 76 53.9
Nitab4.5_0000164g0020 Nicotiana tabacum HOM05D002907 ORTHO05D005554 8.1e-14 80.5 83 53.0
DCAR_030301 Daucus carota HOM05D002907 ORTHO05D005554 2.0e-12 75.9 90 43.3
Nitab4.5_0002746g0020 Nicotiana tabacum HOM05D002907 ORTHO05D005554 1.1e-10 70.1 46 65.2
QL01p044581 Quercus lobata HOM05D002907 ORTHO05D005554 1.9e-10 69.3 83 43.4
QL01p044591 Quercus lobata HOM05D002907 ORTHO05D005554 1.9e-10 69.3 83 43.4
QL06p039579 Quercus lobata HOM05D002907 ORTHO05D000065 7.1e-10 67.4 87 39.1
QL93p0100_0313 Quercus lobata HOM05D000038 ORTHO05D000612 7.1e-10 67.4 84 38.1
Lj7A628T41 Lonicera japonica HOM05D002907 ORTHO05D000065 1.6e-09 66.2 87 36.8
QL07p007200 Quercus lobata HOM05D000096 ORTHO05D000045 1.6e-09 66.2 83 42.2
QL05p044516 Quercus lobata HOM05D002907 ORTHO05D000065 2.1e-09 65.9 84 36.9
Peaxi162Scf00168g01413 Petunia axillaris HOM05D002907 ORTHO05D005554 2.7e-09 65.5 92 43.5
Lj1A275T36 Lonicera japonica HOM05D002907 ORTHO05D000065 3.5e-09 65.1 87 36.8
Hma1.2p1_0045F.1_g026410 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 6.0e-09 64.3 87 34.5
Peaxi162Scf00871g00034 Petunia axillaris HOM05D002907 ORTHO05D005554 7.9e-09 63.9 91 44.0
QL04p076347 Quercus lobata HOM05D002907 ORTHO05D000065 1.8e-08 62.8 84 35.7
QL93p0160_0004 Quercus lobata HOM05D002907 ORTHO05D000065 1.8e-08 62.8 84 35.7
QL93p0160_0016 Quercus lobata HOM05D002907 ORTHO05D000065 2.3e-08 62.4 84 35.7
TWI39G0069 Tripterygium wilfordii HOM05D002907 ORTHO05D005554 2.3e-08 62.4 85 36.5
DCAR_015915 Daucus carota HOM05D002907 ORTHO05D005554 2.5e-07 58.9 81 37.0
HanXRQChr13g0403861 Helianthus annuus HOM05D003964 ORTHO05D000174 7.4e-07 57.4 82 37.8
HanXRQChr14g0436911 Helianthus annuus HOM05D003964 ORTHO05D000174 7.4e-07 57.4 82 37.8
Lj2A19T41 Lonicera japonica HOM05D002907 ORTHO05D000065 1.3e-06 56.6 80 35.0
SGA_v2.0_scaffold106G30698 Striga asiatica HOM05D000353 ORTHO05D000174 1.6e-06 56.2 83 34.9
Medtr1g492690 Medicago truncatula HOM05D002441 ORTHO05D022927 2.8e-06 55.5 90 27.8
Aa31LG7G11790 Aethionema arabicum HOM05D000353 ORTHO05D000174 3.7e-06 55.1 84 35.7
DCAR_031322 Daucus carota HOM05D002907 ORTHO05D000065 3.7e-06 55.1 83 30.1
DCAR_005332 Daucus carota HOM05D002907 ORTHO05D000065 4.8e-06 54.7 84 31.0
TPR.G6063 Trifolium pratense HOM05D000096 ORTHO05D000065 4.8e-06 54.7 89 32.6
ECA248G1544 Erigeron canadensis HOM05D000096 ORTHO05D000045 6.2e-06 54.3 83 34.9
HanXRQChr05g0143541 Helianthus annuus HOM05D003964 ORTHO05D000174 6.2e-06 54.3 84 34.5
Medtr4g070090 Medicago truncatula HOM05D002907 ORTHO05D000065 8.2e-06 53.9 94 31.9
Medtr5g027390 Medicago truncatula HOM05D002907 ORTHO05D000065 8.2e-06 53.9 94 31.9


User provided reference genes

Program Settings