Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1241.4 Capsicum annuum HOM05D006447 ORTHO05D007938 4.4e-62 241.1 123 100.0
CAN.G1241.6 Capsicum annuum HOM05D006447 ORTHO05D007938 1.4e-55 219.5 120 93.3
CAN.G3484.1 Capsicum annuum HOM05D006447 ORTHO05D007938 1.4e-55 219.5 120 93.3
CAN.G4329.1 Capsicum annuum HOM05D006447 ORTHO05D007938 1.7e-53 212.6 110 98.2
Sopen12g003620 Solanum pennellii HOM05D006447 ORTHO05D007938 4.9e-53 211.1 120 90.0
Nitab4.5_0000540g0030 Nicotiana tabacum HOM05D006447 ORTHO05D007938 1.4e-52 209.5 120 90.0
Peaxi162Scf00498g00029 Petunia axillaris HOM05D006447 ORTHO05D007938 3.2e-52 208.4 120 88.3
Nitab4.5_0003781g0070 Nicotiana tabacum HOM05D006447 ORTHO05D007938 1.2e-51 206.5 120 89.2
PGSC0003DMG400000348 Solanum tuberosum HOM05D006447 ORTHO05D007938 2.5e-49 198.7 146 74.0
Ciclev10009402m.g Citrus clementina HOM05D006447 ORTHO05D007938 1.3e-48 196.4 120 81.7
Rhsim05G0029800 Rhododendron simsii HOM05D006447 ORTHO05D007938 2.8e-48 195.3 120 85.0
RcHm_v2.0_Chr2g0092441 Rosa chinensis HOM05D006447 ORTHO05D007938 4.8e-48 194.5 120 83.3
DCAR_024680 Daucus carota HOM05D006447 ORTHO05D007938 8.1e-48 193.7 120 82.5
DCAR_031970 Daucus carota HOM05D006447 ORTHO05D007938 8.1e-48 193.7 120 82.5
FvH4_1g06700 Fragaria vesca HOM05D006447 ORTHO05D007938 1.1e-47 193.4 120 82.5
Migut.K00568 Erythranthe guttata HOM05D006447 ORTHO05D007938 1.4e-47 193.0 120 80.0
MD15G1201700 Malus domestica HOM05D006447 ORTHO05D007938 1.4e-47 193.0 120 81.7
FAN26G2507 Fragaria x ananassa HOM05D006447 ORTHO05D007938 1.8e-47 192.6 120 82.5
CSS0014749 Camellia sinensis var. sinensis HOM05D006447 ORTHO05D007938 2.4e-47 192.2 120 83.3
Oeu057342.1 Olea europaea HOM05D006447 ORTHO05D007938 3.1e-47 191.8 120 80.8
ECA234G4260 Erigeron canadensis HOM05D006447 ORTHO05D007938 6.9e-47 190.7 120 79.2
Atru.BG.7.p Acer truncatum HOM05D006447 ORTHO05D007938 2.6e-46 188.7 120 80.0
Manes.03G029700 Manihot esculenta HOM05D006447 ORTHO05D007938 2.6e-46 188.7 120 80.0
Prupe.7G215800 Prunus persica HOM05D006447 ORTHO05D007938 2.6e-46 188.7 120 80.8
Lj7A670G54 Lonicera japonica HOM05D006447 ORTHO05D007938 3.4e-46 188.3 120 80.0
Potri.018G069800 Populus trichocarpa HOM05D006447 ORTHO05D007938 3.4e-46 188.3 120 79.2
HanXRQChr10g0319031 Helianthus annuus HOM05D006447 ORTHO05D007938 4.5e-46 188.0 120 78.3
Sabra18G0061100 Salix brachista HOM05D006447 ORTHO05D007938 4.5e-46 188.0 120 78.3
SalBow1G2756 Salvia bowleyana HOM05D006447 ORTHO05D007938 5.8e-46 187.6 120 78.3
SalBow1G3435 Salvia bowleyana HOM05D006447 ORTHO05D007938 5.8e-46 187.6 120 78.3
Cfa003143 Carpinus fangiana HOM05D006447 ORTHO05D007938 7.6e-46 187.2 118 79.7
CiPaw.04G153800 Carya illinoinensis HOM05D006447 ORTHO05D007938 7.6e-46 187.2 118 79.7
Ca_16628_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 7.6e-46 187.2 120 79.2
Ca_25608_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 7.6e-46 187.2 120 79.2
Actinidia39754 Actinidia chinensis HOM05D006447 ORTHO05D007938 9.9e-46 186.8 120 80.0
unitig_749.g13512 Utricularia gibba HOM05D006447 ORTHO05D007938 9.9e-46 186.8 120 75.8
Lsat_1_v5_gn_5_146261 Lactuca sativa HOM05D006447 ORTHO05D007938 1.7e-45 186.0 118 78.0
COL.COLO4_18262 Corchorus olitorius HOM05D006447 ORTHO05D007938 2.2e-45 185.7 120 80.0
GSVIVG01015263001 Vitis vinifera HOM05D006447 ORTHO05D007938 2.2e-45 185.7 120 78.3
Hund14295 Selenicereus undatus HOM05D006447 ORTHO05D007938 2.9e-45 185.3 129 76.0
SGA_v2.0_scaffold210G42077 Striga asiatica HOM05D006447 ORTHO05D007938 2.9e-45 185.3 120 77.5
EL10Ac5g12560 Beta vulgaris HOM05D006447 ORTHO05D007938 3.8e-45 184.9 120 77.5
AUR62010457 Chenopodium quinoa HOM05D006447 ORTHO05D007938 3.8e-45 184.9 120 79.2
Lalb_Chr22g0349841 Lupinus albus HOM05D006447 ORTHO05D007938 4.9e-45 184.5 120 77.5
Sc18g0001690 Simmondsia chinensis HOM05D006447 ORTHO05D007938 4.9e-45 184.5 120 77.5
Sc18g0001740 Simmondsia chinensis HOM05D006447 ORTHO05D007938 4.9e-45 184.5 120 77.5
Psat1g048880 Pisum sativum HOM05D006447 ORTHO05D007938 8.4e-45 183.7 120 77.5
Glyma.01G004700 Glycine max HOM05D006447 ORTHO05D007938 1.1e-44 183.3 120 75.8
Eucgr.C00935 Eucalyptus grandis HOM05D006447 ORTHO05D007938 1.9e-44 182.6 120 75.0
Eucgr.L02391 Eucalyptus grandis HOM05D006447 ORTHO05D007938 1.9e-44 182.6 120 75.0
Phvul.004G173200 Phaseolus vulgaris HOM05D006447 ORTHO05D007938 1.9e-44 182.6 120 74.2
PGR142G0783 Punica granatum HOM05D006447 ORTHO05D007938 1.9e-44 182.6 120 79.2
ClCG03G015910 Citrullus lanatus HOM05D006447 ORTHO05D007938 2.4e-44 182.2 120 78.3
VMungo0464G1544 Vigna mungo HOM05D006447 ORTHO05D007938 2.4e-44 182.2 120 75.0
Cc06_g10870 Coffea canephora HOM05D006447 ORTHO05D007938 4.2e-44 181.4 120 77.5
AUR62030454 Chenopodium quinoa HOM05D006447 ORTHO05D007938 5.4e-44 181.0 120 76.7
TPR.G26948 Trifolium pratense HOM05D006447 ORTHO05D007938 5.4e-44 181.0 120 74.2
Gohir.D07G009900 Gossypium hirsutum HOM05D006447 ORTHO05D007938 7.1e-44 180.6 120 76.7
Gorai.001G010200 Gossypium raimondii HOM05D006447 ORTHO05D007938 7.1e-44 180.6 120 76.7
Medtr6g090585 Medicago truncatula HOM05D006447 ORTHO05D007938 9.3e-44 180.3 120 75.8
CsaV3_1G040040 Cucumis sativus L. HOM05D006447 ORTHO05D007938 1.2e-43 179.9 120 76.7
Gohir.A07G009600 Gossypium hirsutum HOM05D006447 ORTHO05D007938 1.2e-43 179.9 120 76.7
Cpa.g.sc229.2 Carica papaya HOM05D006447 ORTHO05D007938 1.6e-43 179.5 120 77.5
Os09g0280600 Oryza sativa ssp. japonica HOM05D006447 ORTHO05D007938 2.1e-43 179.1 120 75.8
Eucgr.C00941 Eucalyptus grandis HOM05D006447 ORTHO05D007938 3.5e-43 178.3 120 73.3
Sed0005705 Sechium edule HOM05D006447 ORTHO05D007938 3.5e-43 178.3 120 76.7
TAR626G0126 Trochodendron aralioides HOM05D006447 ORTHO05D007938 3.5e-43 178.3 120 76.7
TAR626G0261 Trochodendron aralioides HOM05D006447 ORTHO05D007938 3.5e-43 178.3 120 76.7
TAR728G0001 Trochodendron aralioides HOM05D006447 ORTHO05D007938 3.5e-43 178.3 120 76.7
QL02p040054 Quercus lobata HOM05D006447 ORTHO05D007938 6.0e-43 177.6 118 77.1
Lj2g0017011 Lotus japonicus HOM05D006447 ORTHO05D007938 1.0e-42 176.8 120 75.0
AT4G29170 Arabidopsis thaliana HOM05D006447 ORTHO05D007938 1.3e-42 176.4 120 75.0
BraA03t14939Z Brassica rapa HOM05D006447 ORTHO05D007938 1.3e-42 176.4 120 75.8
BcaNung00456 Brassica carinata HOM05D006447 ORTHO05D007938 1.8e-42 176.0 120 75.8
BolC7t46152H Brassica oleracea HOM05D006447 ORTHO05D007938 1.8e-42 176.0 120 75.8
BcaNung00458 Brassica carinata HOM05D006447 ORTHO05D007938 2.3e-42 175.6 120 75.8
A03p58760 Brassica napus HOM05D006447 ORTHO05D007938 5.1e-42 174.5 120 75.0
CARHR236900 Cardamine hirsuta HOM05D006447 ORTHO05D007938 5.1e-42 174.5 120 73.3
Nn8g38980 Nelumbo nucifera HOM05D006447 ORTHO05D007938 8.7e-42 173.7 120 73.3
Carub.0007s1142 Capsella rubella HOM05D006447 ORTHO05D007938 1.1e-41 173.3 120 73.3
Aa31LG2G21480 Aethionema arabicum HOM05D006447 ORTHO05D007938 1.5e-41 172.9 120 72.5
Aqoxy7G01349 Aquilegia oxysepala HOM05D006447 ORTHO05D007938 1.9e-41 172.6 120 72.5
Thhalv10026148m.g Eutrema salsugineum HOM05D006447 ORTHO05D007938 3.3e-41 171.8 120 71.7
AL7G23270 Arabidopsis lyrata HOM05D006447 ORTHO05D007938 5.6e-41 171.0 117 74.4
SHI02797 Sapria himalayana HOM05D006447 ORTHO05D007938 1.3e-40 169.9 118 73.7
arahy.Tifrunner.gnm1.ann1.2E9KT7 Arachis hypogaea HOM05D006447 ORTHO05D007938 2.1e-40 169.1 148 62.8
arahy.Tifrunner.gnm1.ann1.D97E3U Arachis hypogaea HOM05D006447 ORTHO05D007938 2.1e-40 169.1 148 62.8
MBI01_g35891_MAGBIO Magnolia biondii HOM05D006447 ORTHO05D007938 3.7e-40 168.3 119 73.1
PSO063G5072 Papaver somniferum HOM05D006447 ORTHO05D007938 8.1e-40 167.2 120 71.7
THA.LOC104814578 Tarenaya hassleriana HOM05D006447 ORTHO05D007938 8.1e-40 167.2 120 72.5
Zm00001eb094560 Zea mays HOM05D006447 ORTHO05D007938 8.1e-40 167.2 120 69.2
PSO832G0153 Papaver somniferum HOM05D006447 ORTHO05D007938 2.4e-39 165.6 120 70.8
ATR0705G171 Amborella trichopoda HOM05D006447 ORTHO05D007938 6.9e-39 164.1 118 69.5
C07p56700 Brassica napus HOM05D006447 ORTHO05D007938 3.4e-38 161.8 146 62.3
FAN19G0010 Fragaria x ananassa HOM05D006447 ORTHO05D007938 4.5e-38 161.4 120 74.2
FAN26G1122 Fragaria x ananassa HOM05D006447 ORTHO05D007938 7.6e-38 160.6 120 74.2
Haze_25859 Corylus avellana HOM05D006447 ORTHO05D007938 6.4e-37 157.5 118 72.9
HPP92_025693 Vanilla planifolia HOM05D006447 ORTHO05D007938 2.4e-36 155.6 120 69.2
Pp3c5_5010 Physcomitrium patens HOM05D006447 ORTHO05D007938 3.5e-35 151.8 120 65.0
Sp7g27093 Schrenkiella parvula HOM05D006447 ORTHO05D007938 3.5e-35 151.8 97 76.3
Mapoly0019s0059 Marchantia polymorpha HOM05D006447 ORTHO05D007938 2.3e-34 149.1 119 65.5
Thecc.09G095600 Theobroma cacao HOM05D006447 ORTHO05D007938 3.9e-34 148.3 120 70.0
SMO133G0018 Selaginella moellendorffii HOM05D006447 ORTHO05D007938 6.7e-34 147.5 119 63.9
AagrBONN_evm.TU.Sc2ySwM_344.5016 Anthoceros agrestis HOM05D006447 ORTHO05D007938 3.3e-33 145.2 117 63.2
vmacro10828 Vaccinium macrocarpon HOM05D006447 ORTHO05D007938 4.3e-33 144.8 86 83.7
TWI34G0617 Tripterygium wilfordii HOM05D006447 ORTHO05D007938 1.6e-32 142.9 120 65.0
CDE05G0869 Ceratophyllum demersum HOM05D006447 ORTHO05D007938 1.1e-31 140.2 113 62.8
Mapoly0063s0089 Marchantia polymorpha HOM05D006447 ORTHO05D007938 4.6e-27 124.8 100 65.0
MELO3C015434.2 Cucumis melo HOM05D006447 ORTHO05D007938 5.1e-26 121.3 120 57.5
C08p09440 Brassica napus HOM05D006447 ORTHO05D007938 3.1e-23 112.1 101 63.4
BolC8t47800H Brassica oleracea HOM05D006447 ORTHO05D007938 5.3e-23 111.3 101 62.4
Dinv42281 Davidia involucrata HOM05D006447 ORTHO05D007938 1.3e-21 106.7 120 53.3
Aqoxy2G00494 Aquilegia oxysepala HOM05D006447 ORTHO05D007938 1.7e-21 106.3 107 59.8
Lsat_1_v5_gn_1_67520 Lactuca sativa HOM05D006447 ORTHO05D007938 6.7e-18 94.4 107 52.3
PGR142G2135 Punica granatum HOM05D006447 ORTHO05D007938 6.7e-18 94.4 68 72.1
Cre06.g278850 Chlamydomonas reinhardtii HOM05D006447 ORTHO05D007938 1.5e-17 93.2 115 42.6
HanXRQChr11g0335721 Helianthus annuus HOM05D006447 ORTHO05D007938 5.3e-15 84.7 52 80.8
MCO03G125 Micromonas commoda HOM05D006447 ORTHO05D007938 3.6e-11 72.0 107 35.5
PRCOL_00003806 Prasinoderma coloniale HOM05D006447 ORTHO05D007938 2.3e-10 69.3 115 40.9


User provided reference genes

Program Settings