Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1241.33 Capsicum annuum HOM05D002451 ORTHO05D007901 1.4e-234 815.8 392 100.0
PGSC0003DMG400000298 Solanum tuberosum HOM05D002451 ORTHO05D007901 6.5e-200 700.7 383 89.0
Sopen12g003400 Solanum pennellii HOM05D002451 ORTHO05D007901 1.2e-198 696.4 383 88.0
Solyc12g008450.2 Solanum lycopersicum HOM05D002451 ORTHO05D007901 1.5e-196 689.5 383 87.2
Nitab4.5_0005668g0020 Nicotiana tabacum HOM05D002451 ORTHO05D007901 1.1e-194 683.3 383 87.2
Peaxi162Scf00665g00035 Petunia axillaris HOM05D002451 ORTHO05D007901 1.9e-191 672.5 392 84.2
Dinv36690 Davidia involucrata HOM05D002451 ORTHO05D007901 1.9e-159 566.2 379 74.1
Hma1.2p1_0571F.1_g180680 Hydrangea macrophylla HOM05D002451 ORTHO05D007901 4.7e-158 561.6 379 72.0
MSTRG.10604 Avicennia marina HOM05D002451 ORTHO05D007901 3.1e-157 558.9 384 71.9
Cc06_g10440 Coffea canephora HOM05D002451 ORTHO05D007901 2.6e-156 555.8 385 71.7
Ciclev10008594m.g Citrus clementina HOM05D002451 ORTHO05D007901 5.8e-156 554.7 391 70.6
Oeu053181.2 Olea europaea HOM05D002451 ORTHO05D007901 1.3e-155 553.5 383 71.3
CSS0003026 Camellia sinensis var. sinensis HOM05D002451 ORTHO05D007901 1.7e-155 553.1 377 71.4
Migut.K00538 Erythranthe guttata HOM05D002451 ORTHO05D007901 1.4e-154 550.1 377 70.3
CiPaw.03G225500 Carya illinoinensis HOM05D002451 ORTHO05D007901 4.1e-154 548.5 377 71.6
Atru.chr7.1460 Acer truncatum HOM05D002451 ORTHO05D007901 1.2e-153 547.0 378 70.9
Gorai.009G027400 Gossypium raimondii HOM05D002451 ORTHO05D007901 1.6e-153 546.6 389 69.4
TAR636G2911 Trochodendron aralioides HOM05D002451 ORTHO05D005601 3.5e-153 545.4 378 71.4
vmacro06250 Vaccinium macrocarpon HOM05D002451 ORTHO05D007901 1.3e-152 543.5 379 70.2
Duzib168G1562 Durio zibethinus HOM05D002451 ORTHO05D007901 6.6e-152 541.2 386 69.4
Actinidia32654 Actinidia chinensis HOM05D002451 ORTHO05D007901 1.9e-151 539.7 378 69.6
Lalb_Chr05g0223211 Lupinus albus HOM05D002451 ORTHO05D007901 1.9e-151 539.7 378 70.1
COL.COLO4_34751 Corchorus olitorius HOM05D002451 ORTHO05D007901 2.5e-151 539.3 383 69.5
CANSAT56G2212 Cannabis sativa HOM05D002451 ORTHO05D007901 8.1e-150 534.3 376 69.1
ClCG11G002150 Citrullus lanatus HOM05D002451 ORTHO05D007901 3.1e-149 532.3 378 69.0
TWI34G1500 Tripterygium wilfordii HOM05D002451 ORTHO05D007901 8.9e-149 530.8 379 71.0
Sed0018496 Sechium edule HOM05D002451 ORTHO05D007901 1.5e-148 530.0 384 67.7
GSVIVG01015305001 Vitis vinifera HOM05D002451 ORTHO05D007901 2.0e-148 529.6 377 67.6
Rhsim03G0237000 Rhododendron simsii HOM05D002451 ORTHO05D007901 9.9e-148 527.3 384 68.2
Aqoxy7G01412 Aquilegia oxysepala HOM05D002451 ORTHO05D007901 2.4e-146 522.7 378 66.9
MELO3C004587.2 Cucumis melo HOM05D002451 ORTHO05D007901 3.2e-146 522.3 378 67.5
Potri.018G087300 Populus trichocarpa HOM05D002451 ORTHO05D007901 1.2e-145 520.4 395 65.3
CsaV3_2G001930 Cucumis sativus L. HOM05D002451 ORTHO05D007901 1.6e-145 520.0 378 67.7
RcHm_v2.0_Chr2g0091831 Rosa chinensis HOM05D002451 ORTHO05D007901 3.0e-144 515.8 387 66.7
EL10Ac8g18383 Beta vulgaris HOM05D002451 ORTHO05D007901 3.9e-144 515.4 383 66.6
arahy.Tifrunner.gnm1.ann1.GUCG30 Arachis hypogaea HOM05D002451 ORTHO05D007901 6.6e-144 514.6 392 65.1
MBI04_g20306_MAGBIO Magnolia biondii HOM05D002451 ORTHO05D007901 1.1e-143 513.8 378 66.1
Lj4g0024953 Lotus japonicus HOM05D002451 ORTHO05D007901 1.5e-143 513.5 388 66.5
Sc08g0008000 Simmondsia chinensis HOM05D002451 ORTHO05D007901 1.9e-143 513.1 379 65.7
PSO063G0860 Papaver somniferum HOM05D002451 ORTHO05D007901 3.3e-143 512.3 379 65.7
Ah.14g083250 Amaranthus hybridus HOM05D002451 ORTHO05D007901 5.6e-143 511.5 384 65.1
MD02G1065300 Malus domestica HOM05D002451 ORTHO05D007901 9.6e-143 510.8 382 66.0
FAN23G2627 Fragaria x ananassa HOM05D002451 ORTHO05D007901 1.2e-142 510.4 387 65.1
FAN19G3003 Fragaria x ananassa HOM05D002451 ORTHO05D007901 3.6e-142 508.8 378 66.7
SalBow1G3696 Salvia bowleyana HOM05D002451 ORTHO05D007901 3.6e-142 508.8 365 69.3
PGR142G3373 Punica granatum HOM05D002451 ORTHO05D007901 1.4e-141 506.9 382 64.7
FAN26G3439 Fragaria x ananassa HOM05D002451 ORTHO05D007901 2.4e-141 506.1 378 66.7
SalBow1G8658 Salvia bowleyana HOM05D002451 ORTHO05D007901 3.1e-141 505.8 357 70.0
TPR.G23434 Trifolium pratense HOM05D002451 ORTHO05D007901 3.1e-141 505.8 388 66.0
FAN26G0432 Fragaria x ananassa HOM05D002451 ORTHO05D007901 5.2e-141 505.0 378 66.7
Lsat_1_v5_gn_7_39761 Lactuca sativa HOM05D002451 ORTHO05D007901 5.2e-141 505.0 382 66.8
Psat7g017040 Pisum sativum HOM05D002451 ORTHO05D007901 5.2e-141 505.0 380 66.8
FAN28G1338 Fragaria x ananassa HOM05D002451 ORTHO05D007901 6.8e-141 504.6 378 65.6
DCAR_012039 Daucus carota HOM05D002451 ORTHO05D007901 1.2e-140 503.8 380 66.1
VMungo0251G0535 Vigna mungo HOM05D002451 ORTHO05D007901 1.5e-140 503.4 383 66.3
Eucgr.C00999 Eucalyptus grandis HOM05D002451 ORTHO05D007901 9.9e-140 500.7 380 66.6
CAN.G1642.1 Capsicum annuum HOM05D002451 ORTHO05D007901 2.2e-139 499.6 278 87.8
CARHR135670 Cardamine hirsuta HOM05D002451 ORTHO05D007901 3.8e-139 498.8 380 64.5
Medtr8g102540 Medicago truncatula HOM05D002451 ORTHO05D007901 1.4e-138 496.9 377 66.3
Glyma.05G227000 Glycine max HOM05D002451 ORTHO05D007901 1.9e-138 496.5 382 66.8
Sp4g22900 Schrenkiella parvula HOM05D002451 ORTHO05D007901 3.2e-138 495.7 381 64.0
AL4G38420 Arabidopsis lyrata HOM05D002451 ORTHO05D007901 2.1e-137 493.0 375 64.0
AUR62010914 Chenopodium quinoa HOM05D002451 ORTHO05D007901 2.1e-137 493.0 379 64.1
AT2G40570 Arabidopsis thaliana HOM05D002451 ORTHO05D007901 4.6e-137 491.9 388 62.4
Lj7A665T28 Lonicera japonica HOM05D002451 ORTHO05D007901 1.0e-136 490.7 485 55.5
Hund09106 Selenicereus undatus HOM05D002451 ORTHO05D007901 1.1e-135 487.3 450 56.4
SpUn0061_0010 Schrenkiella parvula HOM05D002451 ORTHO05D007901 4.3e-135 485.3 374 63.9
BcaB06g29152 Brassica carinata HOM05D002451 ORTHO05D007901 1.3e-134 483.8 381 61.7
Thhalv10016464m.g Eutrema salsugineum HOM05D002451 ORTHO05D007901 2.4e-133 479.6 398 60.3
HPP92_009804 Vanilla planifolia HOM05D002451 ORTHO05D007901 2.4e-133 479.6 385 60.8
HanXRQChr09g0238871 Helianthus annuus HOM05D002451 ORTHO05D007901 3.1e-133 479.2 389 61.2
BcaC02g07322 Brassica carinata HOM05D002451 ORTHO05D007901 5.3e-133 478.4 376 61.2
A04p31020 Brassica napus HOM05D002451 ORTHO05D007901 1.2e-132 477.2 385 60.5
BolC4t28342H Brassica oleracea HOM05D002451 ORTHO05D007901 1.5e-132 476.9 381 60.9
BraA04t18559Z Brassica rapa HOM05D002451 ORTHO05D007901 1.5e-132 476.9 385 60.5
C04p68410 Brassica napus HOM05D002451 ORTHO05D007901 2.0e-132 476.5 385 60.3
ATR0705G045 Amborella trichopoda HOM05D002451 ORTHO05D007901 4.5e-132 475.3 394 59.6
THA.LOC104807537 Tarenaya hassleriana HOM05D002451 ORTHO05D007901 5.8e-132 474.9 381 61.9
Os06g0555500 Oryza sativa ssp. japonica HOM05D002451 ORTHO05D007901 1.0e-128 464.2 387 58.7
Sabra18G0075400 Salix brachista HOM05D002451 ORTHO05D007901 1.1e-125 454.1 378 60.3
Ca_17363_v3 Cicer arietinum L. HOM05D002451 ORTHO05D007901 6.9e-125 451.4 340 65.0
Zm00001eb384640 Zea mays HOM05D002451 ORTHO05D007901 9.0e-125 451.1 392 57.4
SHI02693 Sapria himalayana HOM05D002451 ORTHO05D007901 2.9e-123 446.0 388 57.5
Aa31LG3G1530 Aethionema arabicum HOM05D002451 ORTHO05D007901 2.7e-121 439.5 466 50.0
SEGI_00986 Sequoiadendron giganteum HOM05D002451 ORTHO05D007901 4.6e-121 438.7 414 54.3
Mapoly0002s0306 Marchantia polymorpha HOM05D002451 ORTHO05D007901 9.0e-117 424.5 341 59.2
Pp3c1_19270 Physcomitrium patens HOM05D002451 ORTHO05D007901 2.9e-115 419.5 383 55.4
AagrBONN_evm.TU.Sc2ySwM_117.4166 Anthoceros agrestis HOM05D002451 ORTHO05D007901 5.1e-112 408.7 377 55.7
Hma1.2p1_0571F.1_g180690 Hydrangea macrophylla HOM05D002451 ORTHO05D007901 2.0e-108 396.7 284 68.3
Manes.16G108300 Manihot esculenta HOM05D002451 ORTHO05D007901 5.5e-106 388.7 285 66.3
SGA_v2.0_scaffold843G53664 Striga asiatica HOM05D002451 ORTHO05D007901 5.5e-106 388.7 304 60.5
Nn8g39075 Nelumbo nucifera HOM05D002451 ORTHO05D007901 1.8e-104 383.6 295 62.4
SGA_v2.0_scaffold19G08736 Striga asiatica HOM05D002451 ORTHO05D007901 1.6e-102 377.1 244 74.2
SMO118G0195 Selaginella moellendorffii HOM05D002451 ORTHO05D007901 5.9e-100 368.6 307 57.7
Prupe.7G220200 Prunus persica HOM05D002451 ORTHO05D007901 1.8e-96 357.1 287 63.1
TAR636G1745 Trochodendron aralioides HOM05D002451 ORTHO05D007901 2.6e-95 353.2 283 63.6
AUR62021412 Chenopodium quinoa HOM05D002451 ORTHO05D007901 1.0e-91 341.3 267 62.2
Thecc.09G101000 Theobroma cacao HOM05D002451 ORTHO05D007901 2.2e-91 340.1 267 63.7
Cfa003184 Carpinus fangiana HOM05D002451 ORTHO05D007901 8.5e-91 338.2 264 64.0
Gohir.A05G025800 Gossypium hirsutum HOM05D002451 ORTHO05D007901 2.5e-90 336.7 270 62.6
FvH4_1g06070 Fragaria vesca HOM05D002451 ORTHO05D007901 1.0e-83 314.7 265 60.0
Phvul.002G309000 Phaseolus vulgaris HOM05D002451 ORTHO05D007901 5.5e-82 308.9 263 59.7
Gohir.D05G027300 Gossypium hirsutum HOM05D002451 ORTHO05D007901 1.2e-81 307.8 223 66.8
CBR_g41536 Chara braunii HOM05D002451 ORTHO05D007901 1.1e-77 294.7 515 35.1
Carub.0004s2284 Capsella rubella HOM05D002451 ORTHO05D007901 5.0e-75 285.8 212 64.2
MD15G1196200 Malus domestica HOM05D002451 ORTHO05D007901 9.8e-71 271.6 363 44.6
CDE08G0666 Ceratophyllum demersum HOM05D002257 ORTHO05D007901 3.8e-67 259.6 221 59.7
QL02p041683 Quercus lobata HOM05D002451 ORTHO05D007901 5.7e-63 245.7 151 77.5
SGA_v2.0_scaffold19G08729 Striga asiatica HOM05D002451 ORTHO05D007901 2.2e-62 243.8 142 81.0
SGA_v2.0_scaffold4172G54434 Striga asiatica HOM05D002451 ORTHO05D007901 1.8e-53 214.2 162 62.3
MCO03G573 Micromonas commoda HOM05D002451 ORTHO05D007901 3.2e-53 213.4 389 33.9
CDE02G1621 Ceratophyllum demersum HOM05D002451 ORTHO05D007901 8.9e-48 195.3 158 58.9
Nitab4.5_0000566g0090 Nicotiana tabacum HOM05D002451 ORTHO05D007901 2.9e-46 190.3 98 91.8
PRCOL_00006066 Prasinoderma coloniale HOM05D000173 ORTHO05D004400 2.4e-45 187.2 344 33.7
Cpa.g.sc40.100 Carica papaya HOM05D002451 ORTHO05D007901 3.1e-40 170.2 88 88.6
Cre06.g272100 Chlamydomonas reinhardtii HOM05D002451 ORTHO05D007901 3.1e-40 170.2 139 56.8
Cpa.g.c44357 Carica papaya HOM05D002451 ORTHO05D007901 4.9e-38 162.9 139 59.7
unitig_46.g18400 Utricularia gibba HOM05D002451 ORTHO05D007901 1.5e-34 151.4 88 78.4
unitig_46.g18399 Utricularia gibba HOM05D002451 ORTHO05D007901 1.3e-27 128.3 125 51.2
ECA240G2417 Erigeron canadensis HOM05D002451 ORTHO05D007901 1.5e-26 124.8 274 32.1
TAR636G3106 Trochodendron aralioides HOM05D002451 ORTHO05D007901 9.9e-15 85.5 76 56.6


User provided reference genes

Program Settings