Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1240.2 Capsicum annuum HOM05D028754 ORTHO05D022150 3.1e-301 1037.7 535 100.0
CAN.G2402.1 Capsicum annuum HOM05D028754 ORTHO05D022150 2.0e-300 1035.0 535 99.8
CAN.G2337.1 Capsicum annuum HOM05D028754 ORTHO05D022150 3.6e-177 625.5 493 68.4
CAN.G1240.1 Capsicum annuum HOM05D028754 ORTHO05D022150 3.1e-176 622.5 493 68.2
Oeu014738.1 Olea europaea HOM05D002749 ORTHO05D000708 2.6e-18 97.8 232 28.4
PGSC0003DMG400037565 Solanum tuberosum HOM05D000679 ORTHO05D000137 5.9e-18 96.7 254 28.0
CANSAT78G2057 Cannabis sativa HOM05D033026 ORTHO05D000137 7.7e-18 96.3 261 26.4
PGSC0003DMG400043182 Solanum tuberosum HOM05D000679 ORTHO05D000137 7.7e-18 96.3 253 28.1
CANSAT25G3227 Cannabis sativa HOM05D008721 ORTHO05D000137 2.2e-17 94.7 289 25.6
CANSAT80G1051 Cannabis sativa HOM05D008721 ORTHO05D000137 6.5e-17 93.2 289 25.6
Sopen12g022620 Solanum pennellii HOM05D010988 ORTHO05D000137 6.5e-17 93.2 251 27.5
CAN.G53.24 Capsicum annuum HOM05D000679 ORTHO05D000137 8.5e-17 92.8 325 25.5
CANSAT25G0487 Cannabis sativa HOM05D008721 ORTHO05D000137 1.9e-16 91.7 319 25.1
Sopen01g020370 Solanum pennellii HOM05D009268 ORTHO05D011733 4.2e-16 90.5 321 25.9
Sopen06g017270 Solanum pennellii HOM05D009268 ORTHO05D011733 4.2e-16 90.5 321 25.5
Sopen05g031060 Solanum pennellii HOM05D009268 ORTHO05D011733 5.5e-16 90.1 321 25.5
Sopen09g021100 Solanum pennellii HOM05D009268 ORTHO05D011733 5.5e-16 90.1 321 25.5
Nitab4.5_0000666g0090 Nicotiana tabacum HOM05D008646 ORTHO05D010739 9.4e-16 89.4 164 36.0
CAN.G89.22 Capsicum annuum HOM05D000679 ORTHO05D000137 1.2e-15 89.0 253 25.7
CAN.G358.114 Capsicum annuum HOM05D000679 ORTHO05D000137 1.6e-15 88.6 252 27.4
Solyc08g066625.1 Solanum lycopersicum HOM05D009268 ORTHO05D011733 2.1e-15 88.2 322 26.1
CAN.G105.2 Capsicum annuum HOM05D000679 ORTHO05D000137 3.6e-15 87.4 249 28.1
Solyc11g042805.1 Solanum lycopersicum HOM05D009268 ORTHO05D000137 3.6e-15 87.4 321 25.5
TWI39G0946 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 7.9e-15 86.3 231 24.7
CANSAT21G0269 Cannabis sativa HOM05D009472 ORTHO05D000137 1.4e-14 85.5 258 26.0
TWI18G0445 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.4e-14 85.5 231 24.7
TWI77G0850 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.4e-14 85.5 231 24.7
CAN.G437.7 Capsicum annuum HOM05D000679 ORTHO05D000137 1.8e-14 85.1 246 25.2
TWI63G1251 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.8e-14 85.1 232 25.4
CANSAT80G2627 Cannabis sativa HOM05D009472 ORTHO05D000137 2.3e-14 84.7 258 26.0
CAN.G1191.13 Capsicum annuum HOM05D000679 ORTHO05D000137 2.3e-14 84.7 254 26.4
Sopen01g014180 Solanum pennellii HOM05D000679 ORTHO05D000137 2.3e-14 84.7 260 25.8
Sopen05g022570 Solanum pennellii HOM05D000679 ORTHO05D000137 3.0e-14 84.3 244 28.7
CANSAT54G0513 Cannabis sativa HOM05D008636 ORTHO05D000137 3.9e-14 84.0 173 31.8
Sopen06g003040 Solanum pennellii HOM05D000679 ORTHO05D000137 3.9e-14 84.0 287 25.4
Sopen09g026450 Solanum pennellii HOM05D000679 ORTHO05D000137 3.9e-14 84.0 287 25.4
Sopen12g007430 Solanum pennellii HOM05D000679 ORTHO05D000137 3.9e-14 84.0 287 25.4
CANSAT11G1718 Cannabis sativa HOM05D009472 ORTHO05D000137 5.1e-14 83.6 255 25.5
CAN.G639.25 Capsicum annuum HOM05D000679 ORTHO05D000137 5.1e-14 83.6 262 24.8
Sopen09g004400 Solanum pennellii HOM05D009268 ORTHO05D011733 5.1e-14 83.6 260 25.8
Sopen10g028350 Solanum pennellii HOM05D000679 ORTHO05D000137 5.1e-14 83.6 251 27.5
CANSAT25G1234 Cannabis sativa HOM05D023333 ORTHO05D000137 8.8e-14 82.8 261 25.3
CANSAT35G0046 Cannabis sativa HOM05D000679 ORTHO05D000137 8.8e-14 82.8 239 26.8
CANSAT21G0858 Cannabis sativa HOM05D008721 ORTHO05D000137 2.6e-13 81.3 289 24.2
CANSAT54G2098 Cannabis sativa HOM05D000679 ORTHO05D000137 2.6e-13 81.3 353 23.5
Solyc08g150114.1 Solanum lycopersicum HOM05D009268 ORTHO05D011733 2.6e-13 81.3 268 25.0
Nitab4.5_0005355g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 3.3e-13 80.9 257 29.6
Sopen06g029680 Solanum pennellii HOM05D000679 ORTHO05D000137 3.3e-13 80.9 210 30.0
CANSAT25G0378 Cannabis sativa HOM05D000679 ORTHO05D000137 4.4e-13 80.5 259 26.3
CANSAT25G1319 Cannabis sativa HOM05D000679 ORTHO05D000137 4.4e-13 80.5 261 25.3
CAN.G453.11 Capsicum annuum HOM05D000679 ORTHO05D000137 5.7e-13 80.1 259 25.5
CAN.G1659.8 Capsicum annuum HOM05D000679 ORTHO05D000137 7.4e-13 79.7 252 25.8
CAN.G337.146 Capsicum annuum HOM05D000679 ORTHO05D000137 1.3e-12 79.0 258 24.8
CAN.G1217.9 Capsicum annuum HOM05D000679 ORTHO05D000137 1.7e-12 78.6 239 25.9
Sopen01g030890 Solanum pennellii HOM05D000679 ORTHO05D000137 2.2e-12 78.2 265 24.9
CAN.G1344.11 Capsicum annuum HOM05D000679 ORTHO05D000482 2.8e-12 77.8 237 25.7
Sopen05g027230 Solanum pennellii HOM05D000002 ORTHO05D000001 2.8e-12 77.8 254 25.2
Nitab4.5_0008647g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000482 3.7e-12 77.4 254 27.6
Nitab4.5_0010618g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 3.7e-12 77.4 241 26.1
Nitab4.5_0013951g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 3.7e-12 77.4 249 26.5
Nitab4.5_0010874g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 4.8e-12 77.0 344 23.8
CANSAT21G0042 Cannabis sativa HOM05D009472 ORTHO05D000137 1.1e-11 75.9 221 25.8
PGSC0003DMG400000873 Solanum tuberosum HOM05D000679 ORTHO05D000137 1.1e-11 75.9 244 25.4
CANSAT54G2653 Cannabis sativa HOM05D000679 ORTHO05D000137 1.8e-11 75.1 306 24.2
Nitab4.5_0001456g0160 Nicotiana tabacum HOM05D008646 ORTHO05D010739 3.1e-11 74.3 68 42.6
FvH4_1g15500 Fragaria vesca HOM05D000529 ORTHO05D000472 4.1e-11 73.9 228 25.4
Nitab4.5_0001889g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000137 5.3e-11 73.6 160 29.4
Nitab4.5_0006628g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 7.0e-11 73.2 263 25.1
Solyc12g017670.3 Solanum lycopersicum HOM05D010988 ORTHO05D000137 7.0e-11 73.2 191 27.7
CANSAT80G0449 Cannabis sativa HOM05D008721 ORTHO05D000137 9.1e-11 72.8 212 25.0
CAN.G523.71 Capsicum annuum HOM05D000541 ORTHO05D000137 9.1e-11 72.8 282 23.8
Nitab4.5_0007600g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.2e-10 72.4 234 25.6
Nitab4.5_0011890g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.2e-10 72.4 244 25.4
CAN.G1093.7 Capsicum annuum HOM05D000679 ORTHO05D000137 1.5e-10 72.0 197 27.9
CAN.G633.6 Capsicum annuum HOM05D000679 ORTHO05D000137 1.5e-10 72.0 238 25.2
Oeu034227.1 Olea europaea HOM05D002749 ORTHO05D000708 1.5e-10 72.0 236 25.4
RcHm_v2.0_Chr2g0104761 Rosa chinensis HOM05D000529 ORTHO05D000472 1.5e-10 72.0 257 24.1
Sopen09g020980 Solanum pennellii HOM05D000679 ORTHO05D000137 1.5e-10 72.0 212 28.8
Sopen12g014500 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-10 72.0 251 25.1
SGA_v2.0_scaffold23G10125 Striga asiatica HOM05D000679 ORTHO05D000137 1.5e-10 72.0 451 21.7
CANSAT56G0862 Cannabis sativa HOM05D000679 ORTHO05D000137 2.6e-10 71.2 304 24.3
CAN.G1316.3 Capsicum annuum HOM05D000679 ORTHO05D000137 2.6e-10 71.2 273 24.5
TWI23G0222 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 2.6e-10 71.2 230 23.9
CAN.G53.11 Capsicum annuum HOM05D000679 ORTHO05D000137 3.5e-10 70.9 196 26.5
CANSAT35G1851 Cannabis sativa HOM05D008636 ORTHO05D000137 4.5e-10 70.5 244 24.6
CAN.G1077.11 Capsicum annuum HOM05D000679 ORTHO05D000137 4.5e-10 70.5 199 26.1
CAN.G2326.1 Capsicum annuum HOM05D000679 ORTHO05D000137 4.5e-10 70.5 241 25.3
TWI36G1743 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 5.9e-10 70.1 274 20.8
CANSAT01G0053 Cannabis sativa HOM05D008636 ORTHO05D000137 7.7e-10 69.7 244 24.2
CANSAT80G2652 Cannabis sativa HOM05D023333 ORTHO05D000137 7.7e-10 69.7 260 24.2
Nitab4.5_0001030g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000137 7.7e-10 69.7 227 26.0
CANSAT54G1268 Cannabis sativa HOM05D008897 ORTHO05D000137 1.0e-09 69.3 218 27.1
Nitab4.5_0006179g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.0e-09 69.3 416 24.3
TWI77G0986 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.0e-09 69.3 191 24.1
CANSAT21G0896 Cannabis sativa HOM05D008636 ORTHO05D000137 1.3e-09 68.9 244 24.2
CAN.G168.29 Capsicum annuum HOM05D000679 ORTHO05D000137 1.3e-09 68.9 177 27.7
Nitab4.5_0013025g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.3e-09 68.9 233 25.8
TWI32G1169 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.3e-09 68.9 228 21.1
Solyc03g150143.1 Solanum lycopersicum HOM05D009268 ORTHO05D011733 1.7e-09 68.6 262 27.5
TWI53G0735 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.7e-09 68.6 311 19.6
TWI63G0551 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.7e-09 68.6 311 19.6
Nitab4.5_0004143g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.2e-09 68.2 237 23.6
TWI74G0229 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 2.2e-09 68.2 314 20.4
CAN.G472.2 Capsicum annuum HOM05D000679 ORTHO05D000137 2.9e-09 67.8 188 28.7
Oeu041585.1 Olea europaea HOM05D002749 ORTHO05D000708 2.9e-09 67.8 200 26.5
TWI38G1257 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 2.9e-09 67.8 311 20.3
CANSAT78G2189 Cannabis sativa HOM05D000679 ORTHO05D000137 3.8e-09 67.4 242 25.2
Sopen07g004240 Solanum pennellii HOM05D000635 ORTHO05D000488 3.8e-09 67.4 138 31.9
TWI18G0265 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 3.8e-09 67.4 145 26.2
TWI79G1717 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 3.8e-09 67.4 294 20.1
CANSAT11G0656 Cannabis sativa HOM05D008636 ORTHO05D000137 5.0e-09 67.0 235 24.7
CANSAT64G1718 Cannabis sativa HOM05D017160 ORTHO05D000137 5.0e-09 67.0 213 26.3
Oeu009393.1 Olea europaea HOM05D009665 ORTHO05D011335 5.0e-09 67.0 299 22.1
Sopen11g022980 Solanum pennellii HOM05D000679 ORTHO05D000137 5.0e-09 67.0 231 24.7
Nitab4.5_0001109g0050 Nicotiana tabacum HOM05D008108 ORTHO05D011004 6.5e-09 66.6 174 29.3
Solyc09g150106.1 Solanum lycopersicum HOM05D009268 ORTHO05D011733 6.5e-09 66.6 133 31.6
Nitab4.5_0011972g0010 Nicotiana tabacum HOM05D008108 ORTHO05D000137 8.5e-09 66.2 322 25.5
Sopen01g037260 Solanum pennellii HOM05D000541 ORTHO05D000137 8.5e-09 66.2 292 22.9
Sopen07g023480 Solanum pennellii HOM05D000541 ORTHO05D000137 8.5e-09 66.2 292 22.9
Sopen11g029170 Solanum pennellii HOM05D000541 ORTHO05D000137 8.5e-09 66.2 292 22.9
CANSAT11G0393 Cannabis sativa HOM05D008721 ORTHO05D000137 1.1e-08 65.9 182 26.4
CAN.G473.114 Capsicum annuum HOM05D000679 ORTHO05D000137 1.1e-08 65.9 199 26.1
Nitab4.5_0000425g0130 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.1e-08 65.9 246 24.8
Nitab4.5_0002151g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.1e-08 65.9 227 25.1
Nitab4.5_0004308g0010 Nicotiana tabacum HOM05D005877 ORTHO05D010356 1.1e-08 65.9 158 30.4
Sopen12g024090 Solanum pennellii HOM05D000679 ORTHO05D000137 1.1e-08 65.9 201 25.4
TWI81G0979 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.1e-08 65.9 311 19.6
CAN.G568.8 Capsicum annuum HOM05D000541 ORTHO05D000137 1.4e-08 65.5 308 23.1
Solyc07g041820.3 Solanum lycopersicum HOM05D010988 ORTHO05D000137 1.9e-08 65.1 136 30.9
Sopen08g017460 Solanum pennellii HOM05D000541 ORTHO05D000137 1.9e-08 65.1 292 22.6
Nitab4.5_0002879g0090 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.5e-08 64.7 172 31.4
Sopen06g004070 Solanum pennellii HOM05D000541 ORTHO05D000137 2.5e-08 64.7 291 22.7
CANSAT78G2148 Cannabis sativa HOM05D008897 ORTHO05D000137 3.2e-08 64.3 168 27.4
CANSAT01G1294 Cannabis sativa HOM05D033026 ORTHO05D022150 4.2e-08 63.9 150 27.3
CANSAT80G0664 Cannabis sativa HOM05D008897 ORTHO05D000137 4.2e-08 63.9 168 26.8
Nitab4.5_0001140g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000482 4.2e-08 63.9 211 25.1
Sopen03g030630 Solanum pennellii HOM05D000541 ORTHO05D000137 4.2e-08 63.9 292 22.3
CAN.G665.1 Capsicum annuum HOM05D000541 ORTHO05D000137 5.5e-08 63.5 256 24.6
CAN.G219.52 Capsicum annuum HOM05D000679 ORTHO05D000137 9.4e-08 62.8 230 22.6
CAN.G1273.10 Capsicum annuum HOM05D000679 ORTHO05D000137 1.2e-07 62.4 209 23.9
Nitab4.5_0000814g0130 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.2e-07 62.4 223 26.0
CANSAT56G1504 Cannabis sativa HOM05D000679 ORTHO05D000137 1.6e-07 62.0 132 30.3
Nitab4.5_0001300g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.1e-07 61.6 217 26.3
Sopen12g015350 Solanum pennellii HOM05D000541 ORTHO05D000137 2.1e-07 61.6 278 24.5
PGSC0003DMG400007650 Solanum tuberosum HOM05D000541 ORTHO05D000137 2.1e-07 61.6 275 24.0
TWI18G1213 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 2.1e-07 61.6 235 26.0
Nitab4.5_0000457g0260 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.7e-07 61.2 120 32.5
Nitab4.5_0002414g0070 Nicotiana tabacum HOM05D002262 ORTHO05D000137 2.7e-07 61.2 229 26.2
CANSAT78G1896 Cannabis sativa HOM05D008897 ORTHO05D000137 3.6e-07 60.8 194 24.2
CAN.G290.9 Capsicum annuum HOM05D000541 ORTHO05D000137 3.6e-07 60.8 264 23.9
CANSAT54G1484 Cannabis sativa HOM05D000679 ORTHO05D000137 4.7e-07 60.5 275 23.3
CAN.G1139.3 Capsicum annuum HOM05D000541 ORTHO05D000137 4.7e-07 60.5 248 23.0
CAN.G1226.29 Capsicum annuum HOM05D000679 ORTHO05D000137 4.7e-07 60.5 187 26.2
Oeu007641.1 Olea europaea HOM05D002749 ORTHO05D000708 4.7e-07 60.5 162 26.5
Nitab4.5_0002703g0010 Nicotiana tabacum HOM05D008646 ORTHO05D010739 8.0e-07 59.7 106 34.9
Nitab4.5_0000646g0230 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.0e-06 59.3 249 24.1
CANSAT56G3453 Cannabis sativa HOM05D008636 ORTHO05D000137 1.4e-06 58.9 170 27.1
Nitab4.5_0004917g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.4e-06 58.9 136 30.9
Oeu035293.1 Olea europaea HOM05D002749 ORTHO05D000708 1.4e-06 58.9 143 23.1
CAN.G442.9 Capsicum annuum HOM05D000541 ORTHO05D000137 1.8e-06 58.5 149 27.5
CANSAT54G0249 Cannabis sativa HOM05D008897 ORTHO05D000137 2.3e-06 58.2 163 25.8
CANSAT54G0860 Cannabis sativa HOM05D008636 ORTHO05D000137 2.3e-06 58.2 170 26.5
CAN.G1302.4 Capsicum annuum HOM05D000541 ORTHO05D000137 3.0e-06 57.8 339 21.2
DCAR_018395 Daucus carota HOM05D000679 ORTHO05D000137 3.9e-06 57.4 172 23.3
Nitab4.5_0011642g0040 Nicotiana tabacum HOM05D000679 ORTHO05D000137 3.9e-06 57.4 120 33.3
Sopen05g020660 Solanum pennellii HOM05D000541 ORTHO05D000137 6.7e-06 56.6 281 21.4
CANSAT25G3489 Cannabis sativa HOM05D008636 ORTHO05D000137 8.8e-06 56.2 136 27.2
Nitab4.5_0006819g0100 Nicotiana tabacum HOM05D000679 ORTHO05D000137 8.8e-06 56.2 120 31.7
Solyc10g047822.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 8.8e-06 56.2 195 26.7
TWI38G1152 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 8.8e-06 56.2 261 25.7
TWI59G0262 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 8.8e-06 56.2 261 25.3
TWI75G0282 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 8.8e-06 56.2 261 25.3


User provided reference genes

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