Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1237.19 Capsicum annuum HOM05D005255 ORTHO05D006276 2.6e-35 151.4 70 100.0
CAN.G1237.20 Capsicum annuum HOM05D005255 ORTHO05D006276 4.8e-29 130.6 63 98.4
Nitab4.5_0005195g0020 Nicotiana tabacum HOM05D005255 ORTHO05D006276 4.5e-27 124.0 63 92.1
Nitab4.5_0011420g0030 Nicotiana tabacum HOM05D005255 ORTHO05D006276 7.7e-27 123.2 63 90.5
Nitab4.5_0001618g0070 Nicotiana tabacum HOM05D005255 ORTHO05D006276 1.3e-26 122.5 63 92.1
Sopen04g008710 Solanum pennellii HOM05D005255 ORTHO05D006276 2.2e-26 121.7 63 92.1
Nitab4.5_0000826g0020 Nicotiana tabacum HOM05D005255 ORTHO05D006276 2.9e-26 121.3 63 90.5
Solyc04g017650.4 Solanum lycopersicum HOM05D005255 ORTHO05D006276 1.1e-25 119.4 63 88.9
Sopen04g008740 Solanum pennellii HOM05D005255 ORTHO05D006276 1.1e-25 119.4 63 88.9
PGSC0003DMG400012725 Solanum tuberosum HOM05D005255 ORTHO05D006276 1.1e-25 119.4 63 88.9
Peaxi162Scf00130g01019 Petunia axillaris HOM05D005255 ORTHO05D006276 4.2e-25 117.5 63 87.3
Rhsim04G0108300 Rhododendron simsii HOM05D005255 ORTHO05D006276 6.7e-23 110.2 63 81.0
TWI74G1492 Tripterygium wilfordii HOM05D005255 ORTHO05D006276 1.5e-22 109.0 64 76.6
Dinv30292 Davidia involucrata HOM05D005255 ORTHO05D006276 2.0e-22 108.6 63 79.4
Duzib093G1389 Durio zibethinus HOM05D005255 ORTHO05D006276 2.0e-22 108.6 63 79.4
CiPaw.09G042700 Carya illinoinensis HOM05D005255 ORTHO05D006276 2.6e-22 108.2 64 78.1
vmacro09038 Vaccinium macrocarpon HOM05D005255 ORTHO05D006276 2.6e-22 108.2 63 81.0
COL.COLO4_21290 Corchorus olitorius HOM05D005255 ORTHO05D006276 3.3e-22 107.8 63 77.8
Haze_19754 Corylus avellana HOM05D005255 ORTHO05D006276 3.3e-22 107.8 64 75.0
Cpa.g.sc120.15 Carica papaya HOM05D005255 ORTHO05D006276 4.4e-22 107.5 62 79.0
Thecc.05G144600 Theobroma cacao HOM05D005255 ORTHO05D006276 1.3e-21 105.9 63 77.8
Actinidia38145 Actinidia chinensis HOM05D005255 ORTHO05D006276 2.8e-21 104.8 63 74.6
CSS0035930 Camellia sinensis var. sinensis HOM05D005255 ORTHO05D006276 2.8e-21 104.8 64 73.4
QL07p004453 Quercus lobata HOM05D005255 ORTHO05D006276 4.8e-21 104.0 63 76.2
TAR623G1148 Trochodendron aralioides HOM05D005255 ORTHO05D006276 8.2e-21 103.2 63 74.6
Eucgr.A02293 Eucalyptus grandis HOM05D005255 ORTHO05D006276 1.1e-20 102.8 63 76.2
Manes.09G016500 Manihot esculenta HOM05D005255 ORTHO05D006276 4.1e-20 100.9 63 77.8
Cfa016749 Carpinus fangiana HOM05D005255 ORTHO05D006276 5.3e-20 100.5 64 70.3
MBI19_g17528_MAGBIO Magnolia biondii HOM05D005255 ORTHO05D006276 5.3e-20 100.5 63 71.4
Manes.09G016721 Manihot esculenta HOM05D005255 ORTHO05D006276 5.3e-20 100.5 63 76.2
Prupe.7G049600 Prunus persica HOM05D005255 ORTHO05D006276 5.3e-20 100.5 63 74.6
MSTRG.6398 Avicennia marina HOM05D005255 ORTHO05D006276 2.6e-19 98.2 63 73.0
Ciclev10006800m.g Citrus clementina HOM05D005255 ORTHO05D006276 2.6e-19 98.2 63 74.6
unitig_8.g3497 Utricularia gibba HOM05D005255 ORTHO05D006276 2.6e-19 98.2 63 76.2
SGA_v2.0_scaffold105G30345 Striga asiatica HOM05D005255 ORTHO05D006276 3.4e-19 97.8 63 71.4
Lj1g0022872 Lotus japonicus HOM05D005255 ORTHO05D006276 4.5e-19 97.4 63 73.0
TAR624G0532 Trochodendron aralioides HOM05D005255 ORTHO05D006276 4.5e-19 97.4 61 68.9
Oeu008184.2 Olea europaea HOM05D005255 ORTHO05D006276 5.9e-19 97.1 63 73.0
Atru.chr1.1248 Acer truncatum HOM05D005255 ORTHO05D006276 7.7e-19 96.7 63 76.2
CANSAT80G0695 Cannabis sativa HOM05D005255 ORTHO05D006276 1.3e-18 95.9 65 69.2
CANSAT80G1558 Cannabis sativa HOM05D005255 ORTHO05D006276 1.3e-18 95.9 65 69.2
Nn7g36447 Nelumbo nucifera HOM05D005255 ORTHO05D006276 1.3e-18 95.9 63 69.8
Sabra06G0031000 Salix brachista HOM05D005255 ORTHO05D006276 1.3e-18 95.9 63 71.4
Glyma.03G132200 Glycine max HOM05D005255 ORTHO05D006276 1.7e-18 95.5 63 69.8
Potri.006G045100 Populus trichocarpa HOM05D005255 ORTHO05D006276 1.7e-18 95.5 63 71.4
SalBow6G4730 Salvia bowleyana HOM05D005255 ORTHO05D006276 2.2e-18 95.1 65 69.2
Lj1C1121T6 Lonicera japonica HOM05D005255 ORTHO05D006276 2.9e-18 94.7 63 69.8
ClCG04G003970 Citrullus lanatus HOM05D005255 ORTHO05D006276 3.8e-18 94.4 63 69.8
Sed0023795 Sechium edule HOM05D005255 ORTHO05D006276 3.8e-18 94.4 63 69.8
Ah.13g076740 Amaranthus hybridus HOM05D005255 ORTHO05D006276 5.0e-18 94.0 64 67.2
DCAR_020535 Daucus carota HOM05D005255 ORTHO05D006276 5.0e-18 94.0 64 67.2
RcHm_v2.0_Chr3g0484561 Rosa chinensis HOM05D005255 ORTHO05D006276 5.0e-18 94.0 63 68.3
AT2G41450 Arabidopsis thaliana HOM05D005255 ORTHO05D006276 6.5e-18 93.6 63 69.8
Lsat_1_v5_gn_8_83080 Lactuca sativa HOM05D005255 ORTHO05D006276 8.5e-18 93.2 63 71.4
Lj1A1118T28 Lonicera japonica HOM05D005255 ORTHO05D006276 8.5e-18 93.2 63 68.3
Hund24659 Selenicereus undatus HOM05D005255 ORTHO05D006276 8.5e-18 93.2 64 70.3
GSVIVG01033557001 Vitis vinifera HOM05D005255 ORTHO05D006276 8.5e-18 93.2 64 73.4
RcHm_v2.0_Chr3g0484121 Rosa chinensis HOM05D005255 ORTHO05D006276 1.1e-17 92.8 63 66.7
EL10Ac3g07169 Beta vulgaris HOM05D005255 ORTHO05D006276 2.5e-17 91.7 54 75.9
CDE08G0636 Ceratophyllum demersum HOM05D005255 ORTHO05D006276 2.5e-17 91.7 64 65.6
Glyma.19G134000 Glycine max HOM05D005255 ORTHO05D006276 2.5e-17 91.7 63 66.7
PSO339G5261 Papaver somniferum HOM05D005255 ORTHO05D006276 2.5e-17 91.7 64 64.1
ECA236G0023 Erigeron canadensis HOM05D005255 ORTHO05D006276 4.2e-17 90.9 63 69.8
Psat3g075800 Pisum sativum HOM05D005255 ORTHO05D006276 4.2e-17 90.9 63 68.3
CARHR136560 Cardamine hirsuta HOM05D005255 ORTHO05D006276 7.2e-17 90.1 63 66.7
AL4G39520 Arabidopsis lyrata HOM05D005255 ORTHO05D006276 9.4e-17 89.7 63 66.7
Carub.0004s2374 Capsella rubella HOM05D005255 ORTHO05D006276 9.4e-17 89.7 63 66.7
arahy.Tifrunner.gnm1.ann1.5V2BX3 Arachis hypogaea HOM05D005255 ORTHO05D006276 1.2e-16 89.4 63 66.7
arahy.Tifrunner.gnm1.ann1.FQMP84 Arachis hypogaea HOM05D005255 ORTHO05D006276 1.2e-16 89.4 63 66.7
Thhalv10016390m.g Eutrema salsugineum HOM05D005255 ORTHO05D006276 1.6e-16 89.0 63 66.7
HanXRQChr06g0176811 Helianthus annuus HOM05D005255 ORTHO05D006276 1.6e-16 89.0 63 65.1
Medtr7g090680 Medicago truncatula HOM05D005255 ORTHO05D006276 1.6e-16 89.0 62 66.1
Aqoxy2G00272 Aquilegia oxysepala HOM05D005255 ORTHO05D006276 2.1e-16 88.6 63 63.5
BcaC02g12783 Brassica carinata HOM05D005255 ORTHO05D006276 2.1e-16 88.6 63 65.1
C04p02730 Brassica napus HOM05D005255 ORTHO05D006276 2.1e-16 88.6 63 65.1
BolC4t21913H Brassica oleracea HOM05D005255 ORTHO05D006276 2.1e-16 88.6 63 65.1
AUR62030394 Chenopodium quinoa HOM05D005255 ORTHO05D006276 2.1e-16 88.6 64 65.6
Lalb_Chr25g0287041 Lupinus albus HOM05D005255 ORTHO05D006276 2.1e-16 88.6 63 68.3
PGR031G1801 Punica granatum HOM05D005255 ORTHO05D006276 2.1e-16 88.6 63 63.5
TPR.G32740 Trifolium pratense HOM05D005255 ORTHO05D006276 2.1e-16 88.6 63 65.1
Ca_08423_v3 Cicer arietinum L. HOM05D005255 ORTHO05D006276 4.7e-16 87.4 63 65.1
Aa31LG1G23460 Aethionema arabicum HOM05D005255 ORTHO05D006276 8.0e-16 86.7 63 63.5
Phvul.001G128100 Phaseolus vulgaris HOM05D005255 ORTHO05D006276 8.0e-16 86.7 63 65.1
AUR62026140 Chenopodium quinoa HOM05D005255 ORTHO05D006276 1.0e-15 86.3 60 66.7
Ca_08424_v3 Cicer arietinum L. HOM05D005255 ORTHO05D006276 1.0e-15 86.3 67 59.7
Cc06_g18410 Coffea canephora HOM05D005255 ORTHO05D006276 1.8e-15 85.5 63 63.5
VMungo1383G1524 Vigna mungo HOM05D005255 ORTHO05D006276 1.8e-15 85.5 63 65.1
VMungo1383G2357 Vigna mungo HOM05D005255 ORTHO05D006276 1.8e-15 85.5 63 65.1
Migut.J01697 Erythranthe guttata HOM05D005255 ORTHO05D006276 3.9e-15 84.3 63 65.1
ATR0721G141 Amborella trichopoda HOM05D005255 ORTHO05D006276 6.7e-15 83.6 59 61.0
Ca_20730_v3 Cicer arietinum L. HOM05D005255 ORTHO05D006276 6.7e-15 83.6 63 63.5
Sp4g23710 Schrenkiella parvula HOM05D005255 ORTHO05D006276 6.7e-15 83.6 63 63.5
A05p02290 Brassica napus HOM05D005255 ORTHO05D006276 1.5e-14 82.4 63 60.3
BraA05t19224Z Brassica rapa HOM05D005255 ORTHO05D006276 1.5e-14 82.4 63 60.3
Os05g0376600 Oryza sativa ssp. japonica HOM05D005255 ORTHO05D006276 1.5e-14 82.4 64 60.9
Zm00001eb286800 Zea mays HOM05D005255 ORTHO05D006276 2.2e-13 78.6 64 59.4
SEGI_00937 Sequoiadendron giganteum HOM05D005255 ORTHO05D006276 1.4e-12 75.9 63 54.0
HPP92_003251 Vanilla planifolia HOM05D005255 ORTHO05D006276 3.1e-12 74.7 63 60.3
THA.LOC104817056 Tarenaya hassleriana HOM05D005255 ORTHO05D006276 7.7e-11 70.1 51 70.6
Lsat_1_v5_gn_5_6521 Lactuca sativa HOM05D005255 ORTHO05D006276 2.2e-10 68.6 48 68.8
Lsat_1_v5_gn_8_83120 Lactuca sativa HOM05D005255 ORTHO05D006276 2.2e-10 68.6 48 68.8
AagrBONN_evm.TU.Sc2ySwM_228.5074 Anthoceros agrestis HOM05D005255 ORTHO05D006276 1.1e-09 66.2 54 53.7
FAN14G4897 Fragaria x ananassa HOM05D005255 ORTHO05D006276 4.2e-09 64.3 62 53.2
CAN.G1237.18 Capsicum annuum HOM05D005255 ORTHO05D006276 1.2e-08 62.8 30 100.0
MELO3C014208.2 Cucumis melo HOM05D005255 ORTHO05D006276 1.6e-08 62.4 43 65.1
Mapoly0085s0026 Marchantia polymorpha HOM05D005255 ORTHO05D006276 4.7e-08 60.8 57 45.6


User provided reference genes

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