Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1237.11 Capsicum annuum HOM05D005503 ORTHO05D008949 7.6e-68 260.4 132 100.0
Solyc04g016420.3 Solanum lycopersicum HOM05D005503 ORTHO05D008949 2.4e-50 202.2 132 81.1
Sopen04g008520 Solanum pennellii HOM05D005503 ORTHO05D008949 3.2e-50 201.8 132 81.1
PGSC0003DMG400012701 Solanum tuberosum HOM05D005503 ORTHO05D008949 1.8e-45 186.0 102 91.2
Nitab4.5_0000826g0100 Nicotiana tabacum HOM05D005503 ORTHO05D008949 3.2e-42 175.3 153 64.1
Nitab4.5_0001618g0220 Nicotiana tabacum HOM05D005503 ORTHO05D008949 6.0e-41 171.0 119 74.8
Peaxi162Scf00130g00911 Petunia axillaris HOM05D005503 ORTHO05D008949 5.1e-40 167.9 131 69.5
GSVIVG01005042001 Vitis vinifera HOM05D005503 ORTHO05D008949 5.3e-21 104.8 126 46.0
Dinv39668 Davidia involucrata HOM05D005503 ORTHO05D008949 6.9e-21 104.4 131 48.9
Lalb_Chr20g0110371 Lupinus albus HOM05D005503 ORTHO05D008949 9.1e-21 104.0 75 65.3
vmacro21945 Vaccinium macrocarpon HOM05D005503 ORTHO05D008949 1.2e-20 103.6 97 54.6
Glyma.03G133400 Glycine max HOM05D005503 ORTHO05D008949 1.5e-20 103.2 110 50.0
Glyma.19G135200 Glycine max HOM05D005503 ORTHO05D008949 1.5e-20 103.2 109 50.5
Lalb_Chr20g0115621 Lupinus albus HOM05D005503 ORTHO05D008949 2.0e-20 102.8 75 65.3
Medtr7g090930 Medicago truncatula HOM05D005503 ORTHO05D008949 4.5e-20 101.7 94 54.3
Phvul.001G128900 Phaseolus vulgaris HOM05D005503 ORTHO05D008949 4.5e-20 101.7 106 50.9
Atru.chr1.1203 Acer truncatum HOM05D005503 ORTHO05D008949 1.0e-19 100.5 104 54.8
Psat3g074800 Pisum sativum HOM05D005503 ORTHO05D008949 1.0e-19 100.5 100 54.0
COL.COLO4_36524 Corchorus olitorius HOM05D005503 ORTHO05D008949 1.3e-19 100.1 129 47.3
Hma1.2p1_0110F.1_g052960 Hydrangea macrophylla HOM05D005503 ORTHO05D008949 1.7e-19 99.8 105 50.5
Aqoxy2G00233 Aquilegia oxysepala HOM05D005503 ORTHO05D008949 2.2e-19 99.4 83 57.8
CiPaw.10G036000 Carya illinoinensis HOM05D005503 ORTHO05D008949 2.2e-19 99.4 80 60.0
DCAR_020514 Daucus carota HOM05D005503 ORTHO05D008949 2.2e-19 99.4 85 57.6
Lj1g0008024 Lotus japonicus HOM05D005503 ORTHO05D008949 2.2e-19 99.4 95 54.7
VMungo1383G2568 Vigna mungo HOM05D005503 ORTHO05D008949 3.8e-19 98.6 126 46.0
RcHm_v2.0_Chr3g0483941 Rosa chinensis HOM05D005503 ORTHO05D008949 5.0e-19 98.2 83 60.2
TWI77G0247 Tripterygium wilfordii HOM05D005503 ORTHO05D008949 5.0e-19 98.2 68 67.6
Gohir.D09G116600 Gossypium hirsutum HOM05D005503 ORTHO05D008949 6.5e-19 97.8 132 43.9
Gorai.006G134900 Gossypium raimondii HOM05D005503 ORTHO05D008949 6.5e-19 97.8 132 43.9
Potri.006G047800 Populus trichocarpa HOM05D005503 ORTHO05D008949 8.5e-19 97.4 82 56.1
Rhsim03G0032200 Rhododendron simsii HOM05D005503 ORTHO05D008949 8.5e-19 97.4 97 53.6
TPR.G7098 Trifolium pratense HOM05D005503 ORTHO05D008949 8.5e-19 97.4 100 53.0
CSS0039750 Camellia sinensis var. sinensis HOM05D005503 ORTHO05D008949 1.1e-18 97.1 101 51.5
FAN05G5816 Fragaria x ananassa HOM05D005503 ORTHO05D008949 1.1e-18 97.1 83 59.0
FvH4_6g24610 Fragaria vesca HOM05D005503 ORTHO05D008949 1.4e-18 96.7 83 59.0
FAN02G3508 Fragaria x ananassa HOM05D005503 ORTHO05D008949 1.4e-18 96.7 83 59.0
FAN14G5504 Fragaria x ananassa HOM05D005503 ORTHO05D008949 1.4e-18 96.7 83 59.0
Sabra06G0033300 Salix brachista HOM05D005503 ORTHO05D008949 1.4e-18 96.7 77 58.4
Haze_19781 Corylus avellana HOM05D005503 ORTHO05D008949 1.9e-18 96.3 91 54.9
Oeu033023.1 Olea europaea HOM05D005503 ORTHO05D008949 2.5e-18 95.9 70 62.9
Actinidia39197 Actinidia chinensis HOM05D005503 ORTHO05D008949 3.2e-18 95.5 128 43.8
Gohir.A09G120500 Gossypium hirsutum HOM05D005503 ORTHO05D008949 3.2e-18 95.5 132 43.2
Ca_22958_v3 Cicer arietinum L. HOM05D005503 ORTHO05D008949 7.2e-18 94.4 114 49.1
Cc06_g18190 Coffea canephora HOM05D005503 ORTHO05D008949 7.2e-18 94.4 102 47.1
MBI13_g26145_MAGBIO Magnolia biondii HOM05D005503 ORTHO05D008949 7.2e-18 94.4 128 45.3
CsaV3_3G040800 Cucumis sativus L. HOM05D005503 ORTHO05D008949 9.4e-18 94.0 91 48.4
MD12G1083400 Malus domestica HOM05D005503 ORTHO05D008949 1.2e-17 93.6 82 54.9
C09p72840 Brassica napus HOM05D005503 ORTHO05D008949 1.6e-17 93.2 98 45.9
BolC9t60020H Brassica oleracea HOM05D005503 ORTHO05D008949 1.6e-17 93.2 98 45.9
FAN09G2222 Fragaria x ananassa HOM05D005503 ORTHO05D008949 1.6e-17 93.2 82 57.3
TAR636G0173 Trochodendron aralioides HOM05D005503 ORTHO05D008949 1.6e-17 93.2 125 44.8
arahy.Tifrunner.gnm1.ann1.BJA8E7 Arachis hypogaea HOM05D005503 ORTHO05D008949 2.1e-17 92.8 113 46.9
arahy.Tifrunner.gnm1.ann1.Z9GIA8 Arachis hypogaea HOM05D005503 ORTHO05D008949 2.1e-17 92.8 129 41.9
Duzib093G0766 Durio zibethinus HOM05D005503 ORTHO05D008949 2.1e-17 92.8 129 42.6
Ciclev10006881m.g Citrus clementina HOM05D005503 ORTHO05D008949 2.7e-17 92.4 119 44.5
ECA247G0412 Erigeron canadensis HOM05D005503 ORTHO05D008949 2.7e-17 92.4 115 43.5
BcaC06g32102 Brassica carinata HOM05D005503 ORTHO05D008949 3.6e-17 92.0 91 50.5
Lsat_1_v5_gn_9_32141 Lactuca sativa HOM05D005503 ORTHO05D008949 3.6e-17 92.0 116 46.6
Manes.09G011000 Manihot esculenta HOM05D005503 ORTHO05D008949 4.7e-17 91.7 122 44.3
Potri.016G044001 Populus trichocarpa HOM05D005503 ORTHO05D008949 4.7e-17 91.7 77 58.4
Prupe.7G052400 Prunus persica HOM05D005503 ORTHO05D008949 4.7e-17 91.7 89 50.6
Hund24647 Selenicereus undatus HOM05D005503 ORTHO05D008949 4.7e-17 91.7 83 55.4
Thhalv10016002m.g Eutrema salsugineum HOM05D005503 ORTHO05D008949 6.1e-17 91.3 91 49.5
PGR004G2205 Punica granatum HOM05D005503 ORTHO05D008949 6.1e-17 91.3 95 50.5
MELO3C009814.2 Cucumis melo HOM05D005503 ORTHO05D008949 8.0e-17 90.9 68 58.8
Oeu006918.1 Olea europaea HOM05D005503 ORTHO05D008949 8.0e-17 90.9 68 61.8
QL07p004035 Quercus lobata HOM05D005503 ORTHO05D008949 8.0e-17 90.9 87 52.9
A10p32120 Brassica napus HOM05D005503 ORTHO05D008949 1.0e-16 90.5 98 45.9
BraA10t45255Z Brassica rapa HOM05D005503 ORTHO05D008949 1.0e-16 90.5 98 45.9
Os05g0496000 Oryza sativa ssp. japonica HOM05D005503 ORTHO05D008949 1.4e-16 90.1 72 56.9
Sc13g0001540 Simmondsia chinensis HOM05D005503 ORTHO05D008949 1.4e-16 90.1 81 54.3
Cpa.g.sc1079.1 Carica papaya HOM05D005503 ORTHO05D008949 2.3e-16 89.4 132 41.7
Duzib128G0213 Durio zibethinus HOM05D005503 ORTHO05D008949 3.0e-16 89.0 130 40.8
Migut.J01714 Erythranthe guttata HOM05D005503 ORTHO05D008949 3.0e-16 89.0 68 61.8
HanXRQChr10g0298211 Helianthus annuus HOM05D005503 ORTHO05D008949 3.0e-16 89.0 74 59.5
ATR0721G098 Amborella trichopoda HOM05D005503 ORTHO05D008949 3.9e-16 88.6 62 64.5
Aa31LG1G21320 Aethionema arabicum HOM05D005503 ORTHO05D008949 5.2e-16 88.2 92 51.1
CANSAT80G2315 Cannabis sativa HOM05D005503 ORTHO05D008949 5.2e-16 88.2 124 44.4
ClCG10G015610 Citrullus lanatus HOM05D005503 ORTHO05D008949 5.2e-16 88.2 68 57.4
Sed0013086 Sechium edule HOM05D005503 ORTHO05D008949 5.2e-16 88.2 112 47.3
Sp6g38760 Schrenkiella parvula HOM05D005503 ORTHO05D008949 6.7e-16 87.8 91 48.4
Eucgr.A02305 Eucalyptus grandis HOM05D005503 ORTHO05D008949 1.1e-15 87.0 65 60.0
Thecc.05G146600 Theobroma cacao HOM05D005503 ORTHO05D008949 1.1e-15 87.0 128 40.6
Nn2g15105 Nelumbo nucifera HOM05D005503 ORTHO05D008949 2.0e-15 86.3 128 43.8
EL10Ac3g07150 Beta vulgaris HOM05D005503 ORTHO05D008949 2.6e-15 85.9 83 50.6
CARHR209280 Cardamine hirsuta HOM05D005503 ORTHO05D008949 2.6e-15 85.9 69 55.1
DCAR_013615 Daucus carota HOM05D005503 ORTHO05D008949 9.7e-15 84.0 83 49.4
AT5G04000 Arabidopsis thaliana HOM05D005503 ORTHO05D008949 1.3e-14 83.6 98 43.9
AUR62024521 Chenopodium quinoa HOM05D005503 ORTHO05D008949 1.3e-14 83.6 121 42.1
Dinv18679 Davidia involucrata HOM05D005503 ORTHO05D008949 1.7e-14 83.2 69 56.5
HPP92_027974 Vanilla planifolia HOM05D005503 ORTHO05D008949 1.7e-14 83.2 76 50.0
Ah.04g151390 Amaranthus hybridus HOM05D005503 ORTHO05D008949 2.2e-14 82.8 61 62.3
AL6G13590 Arabidopsis lyrata HOM05D005503 ORTHO05D008949 2.8e-14 82.4 69 52.2
Carub.0006s0293 Capsella rubella HOM05D005503 ORTHO05D008949 2.8e-14 82.4 103 42.7
CDE09G0956 Ceratophyllum demersum HOM05D003424 ORTHO05D004025 2.8e-14 82.4 71 57.7
Zm00001eb291660 Zea mays HOM05D005503 ORTHO05D008949 4.8e-14 81.6 120 44.2
THA.LOC104816402 Tarenaya hassleriana HOM05D005503 ORTHO05D008949 1.4e-13 80.1 62 58.1
unitig_22.g6053 Utricularia gibba HOM05D005503 ORTHO05D008949 1.4e-13 80.1 78 48.7
Ah.13g077080 Amaranthus hybridus HOM05D005503 ORTHO05D008949 2.6e-12 75.9 125 40.0
PSO063G5603 Papaver somniferum HOM05D005503 ORTHO05D008949 5.9e-12 74.7 87 47.1
Mapoly0048s0063 Marchantia polymorpha HOM05D005503 ORTHO05D008949 7.7e-12 74.3 92 43.5
SalBow6G3706 Salvia bowleyana HOM05D005503 ORTHO05D008949 1.3e-11 73.6 113 39.8
SalBow6G4155 Salvia bowleyana HOM05D005503 ORTHO05D008949 1.3e-11 73.6 113 39.8
SGA_v2.0_scaffold69G23127 Striga asiatica HOM05D005503 ORTHO05D008949 2.5e-10 69.3 80 46.2
HPP92_018218 Vanilla planifolia HOM05D005503 ORTHO05D008949 2.5e-10 69.3 67 46.3
Hma1.2p1_0005F.1_g004410 Hydrangea macrophylla HOM05D005503 ORTHO05D008949 1.4e-08 63.5 72 48.6
vmacro21963 Vaccinium macrocarpon HOM05D005503 ORTHO05D008949 5.2e-08 61.6 57 52.6


User provided reference genes

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