Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1231.12 Capsicum annuum HOM05D000049 ORTHO05D008785 4.8e-68 261.2 142 100.0
Solyc01g107660.3 Solanum lycopersicum HOM05D000049 ORTHO05D008785 3.6e-55 218.4 142 83.1
PGSC0003DMG400025866 Solanum tuberosum HOM05D000049 ORTHO05D008785 6.1e-55 217.6 142 84.5
Nitab4.5_0002815g0100 Nicotiana tabacum HOM05D000049 ORTHO05D008785 8.2e-52 207.2 142 79.6
Peaxi162Scf00016g02238 Petunia axillaris HOM05D000049 ORTHO05D008785 2.6e-50 202.2 142 79.6
Nitab4.5_0005392g0020 Nicotiana tabacum HOM05D000049 ORTHO05D008785 5.5e-48 194.5 142 77.5
GSVIVG01003167001 Vitis vinifera HOM05D000049 ORTHO05D008785 8.2e-36 154.1 150 62.7
Cc02_g19180 Coffea canephora HOM05D000049 ORTHO05D008785 1.8e-35 152.9 145 62.8
CANSAT25G0973 Cannabis sativa HOM05D000049 ORTHO05D008785 3.1e-35 152.1 142 65.5
Duzib132G0396 Durio zibethinus HOM05D000049 ORTHO05D008785 2.0e-34 149.4 148 61.5
Hma1.2p1_0796F.1_g219130 Hydrangea macrophylla HOM05D000049 ORTHO05D008785 2.0e-34 149.4 146 63.7
Oeu010393.1 Olea europaea HOM05D000049 ORTHO05D008785 3.5e-34 148.7 144 62.5
Thecc.02G106900 Theobroma cacao HOM05D000049 ORTHO05D008785 4.5e-34 148.3 148 60.8
Cpa.g.sc106.84 Carica papaya HOM05D000049 ORTHO05D008785 5.9e-34 147.9 146 60.3
SalBow3G3686 Salvia bowleyana HOM05D000049 ORTHO05D008785 5.9e-34 147.9 143 65.7
Actinidia27967 Actinidia chinensis HOM05D000049 ORTHO05D008785 7.7e-34 147.5 150 60.7
Atru.chr5.2581 Acer truncatum HOM05D000049 ORTHO05D008785 1.0e-33 147.1 145 61.4
SGA_v2.0_scaffold393G50708 Striga asiatica HOM05D000049 ORTHO05D008785 1.3e-33 146.7 141 63.8
CANSAT25G0620 Cannabis sativa HOM05D000049 ORTHO05D008785 1.7e-33 146.4 140 63.6
ECA240G2980 Erigeron canadensis HOM05D000049 ORTHO05D000027 2.9e-33 145.6 141 57.4
Eucgr.H03224 Eucalyptus grandis HOM05D000049 ORTHO05D008785 2.9e-33 145.6 146 61.0
Prupe.8G134100 Prunus persica HOM05D000049 ORTHO05D008785 3.8e-33 145.2 144 62.5
Atru.chr11.1081 Acer truncatum HOM05D000049 ORTHO05D008785 5.0e-33 144.8 144 60.4
Duzib248G1051 Durio zibethinus HOM05D000049 ORTHO05D008785 5.0e-33 144.8 145 62.1
Oeu018599.1 Olea europaea HOM05D000049 ORTHO05D008785 6.5e-33 144.4 173 56.1
Sabra16G0189300 Salix brachista HOM05D000049 ORTHO05D008785 6.5e-33 144.4 145 61.4
VMungo0720G1000 Vigna mungo HOM05D000049 ORTHO05D008785 8.5e-33 144.1 149 60.4
Phvul.007G038900 Phaseolus vulgaris HOM05D000049 ORTHO05D008785 1.1e-32 143.7 149 60.4
Potri.009G096800 Populus trichocarpa HOM05D000049 ORTHO05D008785 1.9e-32 142.9 145 60.0
AUR62039109 Chenopodium quinoa HOM05D000049 ORTHO05D008785 2.5e-32 142.5 145 60.7
EL10Ac9g22295 Beta vulgaris HOM05D000049 ORTHO05D008785 4.2e-32 141.7 145 58.6
Glyma.10G263000 Glycine max HOM05D000049 ORTHO05D008785 5.5e-32 141.4 150 59.3
Manes.02G137400 Manihot esculenta HOM05D000049 ORTHO05D008785 5.5e-32 141.4 146 61.0
Potri.001G301100 Populus trichocarpa HOM05D000049 ORTHO05D008785 9.4e-32 140.6 145 61.4
Sc08g0001450 Simmondsia chinensis HOM05D000049 ORTHO05D008785 9.4e-32 140.6 145 60.0
AUR62010281 Chenopodium quinoa HOM05D000049 ORTHO05D008785 1.2e-31 140.2 145 60.0
Sed0018040 Sechium edule HOM05D000049 ORTHO05D008785 1.2e-31 140.2 145 61.4
Ciclev10029534m.g Citrus clementina HOM05D000049 ORTHO05D008785 1.6e-31 139.8 145 62.1
Migut.N01171 Erythranthe guttata HOM05D000049 ORTHO05D008785 1.6e-31 139.8 142 61.3
Glyma.20G127500 Glycine max HOM05D000049 ORTHO05D008785 1.6e-31 139.8 145 60.0
AL7G17120 Arabidopsis lyrata HOM05D000049 ORTHO05D008785 2.1e-31 139.4 142 59.2
CiPaw.06G170000 Carya illinoinensis HOM05D000049 ORTHO05D008785 2.1e-31 139.4 144 59.0
Gohir.D02G207500 Gossypium hirsutum HOM05D000049 ORTHO05D008785 2.1e-31 139.4 147 58.5
Lj5g0006015 Lotus japonicus HOM05D000049 ORTHO05D008785 2.7e-31 139.0 142 59.2
Haze_10161 Corylus avellana HOM05D000049 ORTHO05D008785 3.6e-31 138.7 151 58.9
Psat6g219680 Pisum sativum HOM05D000049 ORTHO05D008785 3.6e-31 138.7 106 67.9
TWI31G0015 Tripterygium wilfordii HOM05D000049 ORTHO05D008785 3.6e-31 138.7 145 60.7
CSS0023695 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 4.7e-31 138.3 149 63.8
Gorai.005G235400 Gossypium raimondii HOM05D000049 ORTHO05D008785 4.7e-31 138.3 147 58.5
BcaNung03801 Brassica carinata HOM05D000049 ORTHO05D008785 6.1e-31 137.9 153 58.8
Nn1g04714 Nelumbo nucifera HOM05D000049 ORTHO05D008785 6.1e-31 137.9 105 74.3
C01p04640 Brassica napus HOM05D000049 ORTHO05D008785 8.0e-31 137.5 153 59.5
BolC1t00447H Brassica oleracea HOM05D000049 ORTHO05D008785 8.0e-31 137.5 153 59.5
Cfa004569 Carpinus fangiana HOM05D000049 ORTHO05D008785 1.0e-30 137.1 148 59.5
FAN20G0640 Fragaria x ananassa HOM05D000049 ORTHO05D008785 1.0e-30 137.1 144 60.4
Gohir.A03G186700 Gossypium hirsutum HOM05D000049 ORTHO05D008785 1.0e-30 137.1 147 58.5
THA.LOC104819560 Tarenaya hassleriana HOM05D000049 ORTHO05D008785 1.4e-30 136.7 147 59.2
HanXRQChr03g0070281 Helianthus annuus HOM05D000049 ORTHO05D008785 1.8e-30 136.3 105 70.5
TPR.G13867 Trifolium pratense HOM05D000049 ORTHO05D008785 1.8e-30 136.3 147 57.1
Ah.01g018130 Amaranthus hybridus HOM05D000049 ORTHO05D008785 2.3e-30 136.0 150 58.7
Carub.0007s0619 Capsella rubella HOM05D000049 ORTHO05D008785 2.3e-30 136.0 150 56.7
QL11p033983 Quercus lobata HOM05D000049 ORTHO05D008785 2.3e-30 136.0 145 60.0
A01p04250 Brassica napus HOM05D000049 ORTHO05D008785 3.0e-30 135.6 153 59.5
BraA01t00414Z Brassica rapa HOM05D000049 ORTHO05D008785 3.0e-30 135.6 153 59.5
ClCG02G006290 Citrullus lanatus HOM05D000049 ORTHO05D008785 3.0e-30 135.6 146 59.6
MSTRG.5347 Avicennia marina HOM05D000049 ORTHO05D008785 4.0e-30 135.2 142 55.6
Lalb_Chr02g0145351 Lupinus albus HOM05D000049 ORTHO05D008785 4.0e-30 135.2 145 56.6
AT4G34190 Arabidopsis thaliana HOM05D000049 ORTHO05D008785 6.7e-30 134.4 148 57.4
FvH4_2g05321 Fragaria vesca HOM05D000049 ORTHO05D008785 6.7e-30 134.4 142 57.7
Migut.B00381 Erythranthe guttata HOM05D000049 ORTHO05D008785 8.8e-30 134.0 133 58.6
PGR042G1228 Punica granatum HOM05D000049 ORTHO05D008785 1.5e-29 133.3 147 58.5
THA.LOC104807247 Tarenaya hassleriana HOM05D000049 ORTHO05D008785 2.6e-29 132.5 107 69.2
CARHR242610 Cardamine hirsuta HOM05D000049 ORTHO05D008785 3.3e-29 132.1 149 54.4
RcHm_v2.0_Chr6g0255531 Rosa chinensis HOM05D000049 ORTHO05D008785 3.3e-29 132.1 146 61.6
Hund06332 Selenicereus undatus HOM05D000049 ORTHO05D008785 3.3e-29 132.1 144 55.6
Aqoxy5G01153 Aquilegia oxysepala HOM05D000049 ORTHO05D008785 5.7e-29 131.3 105 66.7
CsaV3_7G008250 Cucumis sativus L. HOM05D000049 ORTHO05D008785 9.7e-29 130.6 147 59.2
Thhalv10026482m.g Eutrema salsugineum HOM05D000049 ORTHO05D008785 9.7e-29 130.6 154 55.2
MD05G1088100 Malus domestica HOM05D000049 ORTHO05D008785 1.3e-28 130.2 146 56.2
CDE02G2484 Ceratophyllum demersum HOM05D000049 ORTHO05D008785 1.7e-28 129.8 142 58.5
Aa31LG2G16660 Aethionema arabicum HOM05D000049 ORTHO05D008785 2.2e-28 129.4 147 57.8
CiPaw.05G010600 Carya illinoinensis HOM05D000049 ORTHO05D008785 3.7e-28 128.6 94 72.3
Sp7g31960 Schrenkiella parvula HOM05D000049 ORTHO05D008785 3.7e-28 128.6 148 56.1
Glyma.20G129600 Glycine max HOM05D000049 ORTHO05D008785 4.8e-28 128.3 145 55.9
Dinv42184 Davidia involucrata HOM05D000049 ORTHO05D008785 1.4e-27 126.7 136 58.8
arahy.Tifrunner.gnm1.ann1.MU25MQ Arachis hypogaea HOM05D000049 ORTHO05D008785 3.1e-27 125.6 81 79.0
CSS0024818 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 1.2e-26 123.6 132 60.6
unitig_22.g6845 Utricularia gibba HOM05D000049 ORTHO05D008785 3.5e-26 122.1 134 56.7
CSS0021501 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 1.3e-25 120.2 132 59.1
TAR381G1170 Trochodendron aralioides HOM05D000049 ORTHO05D008785 3.8e-25 118.6 103 61.2
DCAR_030806 Daucus carota HOM05D000049 ORTHO05D008785 1.5e-24 116.7 87 64.4
arahy.Tifrunner.gnm1.ann1.KJA62A Arachis hypogaea HOM05D000049 ORTHO05D008785 3.2e-24 115.5 74 79.7
HPP92_004768 Vanilla planifolia HOM05D000049 ORTHO05D008785 2.1e-23 112.8 105 57.1
FAN15G1433 Fragaria x ananassa HOM05D000049 ORTHO05D008785 2.7e-23 112.5 131 55.0
Medtr1g107490 Medicago truncatula HOM05D000049 ORTHO05D008785 2.7e-23 112.5 132 50.8
PSO210G6109 Papaver somniferum HOM05D000049 ORTHO05D008785 2.7e-23 112.5 120 59.2
FAN24G0707 Fragaria x ananassa HOM05D000049 ORTHO05D008785 3.6e-23 112.1 129 53.5
MELO3C018482.2 Cucumis melo HOM05D000049 ORTHO05D000027 8.8e-22 107.5 88 69.3
PSO170G1282 Papaver somniferum HOM05D000049 ORTHO05D008785 1.5e-21 106.7 125 57.6
SEGI_21574 Sequoiadendron giganteum HOM05D000049 ORTHO05D008785 7.5e-21 104.4 77 64.9
Hund00143 Selenicereus undatus HOM05D000049 ORTHO05D008785 6.3e-20 101.3 83 65.1
Zm00001eb048670 Zea mays HOM05D000049 ORTHO05D008785 9.1e-19 97.4 83 54.2
Dinv15757 Davidia involucrata HOM05D000049 ORTHO05D008785 2.0e-18 96.3 117 52.1
Sabra09G0074400 Salix brachista HOM05D000049 ORTHO05D008785 2.9e-17 92.4 132 48.5
Pp3c1_21810 Physcomitrium patens HOM05D000049 ORTHO05D008785 8.0e-15 84.3 85 50.6
Mapoly0006s0145 Marchantia polymorpha HOM05D000049 ORTHO05D008785 1.4e-14 83.6 143 42.7
Os11g0621400 Oryza sativa ssp. japonica HOM05D000049 ORTHO05D008785 1.4e-14 83.6 88 47.7
vmacro19520 Vaccinium macrocarpon HOM05D000049 ORTHO05D008785 1.4e-14 83.6 114 48.2
ATR0691G295 Amborella trichopoda HOM05D000049 ORTHO05D008785 6.8e-14 81.3 55 78.2
TAR376G0829 Trochodendron aralioides HOM05D000049 ORTHO05D008785 6.8e-14 81.3 89 52.8
SMO340G0196 Selaginella moellendorffii HOM05D000049 ORTHO05D008785 3.4e-13 79.0 83 49.4
AagrBONN_evm.TU.Sc2ySwM_117.2783 Anthoceros agrestis HOM05D000049 ORTHO05D008785 2.8e-12 75.9 79 49.4
Peaxi162Scf00447g00114 Petunia axillaris HOM05D000049 ORTHO05D008785 1.6e-10 70.1 59 67.8
FAN27G0752 Fragaria x ananassa HOM05D000049 ORTHO05D000027 4.5e-10 68.6 108 44.4
SalBow6G4602 Salvia bowleyana HOM05D010989 ORTHO05D013112 1.7e-09 66.6 122 44.3
TAR628G1275 Trochodendron aralioides HOM05D000049 ORTHO05D008785 1.8e-06 56.6 62 51.6
Os10g0395200 Oryza sativa ssp. japonica HOM05D000049 ORTHO05D008785 2.3e-06 56.2 53 50.9
COL.COLO4_15744 Corchorus olitorius HOM05D001416 ORTHO05D002549 4.0e-06 55.5 34 76.5


User provided reference genes

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