Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1230.3 Capsicum annuum HOM05D007100 ORTHO05D008958 1.7e-91 339.7 224 100.0
PGSC0003DMG400020466 Solanum tuberosum HOM05D007100 ORTHO05D008958 5.6e-79 298.1 225 91.6
Solyc06g066000.3 Solanum lycopersicum HOM05D007100 ORTHO05D008958 2.1e-78 296.2 224 90.2
Sopen06g024480 Solanum pennellii HOM05D007100 ORTHO05D008958 2.1e-78 296.2 224 90.2
PGSC0003DMG400020484 Solanum tuberosum HOM05D007100 ORTHO05D008958 2.1e-78 296.2 224 90.2
Sopen06g024470 Solanum pennellii HOM05D007100 ORTHO05D008958 2.0e-76 289.7 225 89.8
Solyc06g065990.1 Solanum lycopersicum HOM05D007100 ORTHO05D008958 2.5e-71 272.7 225 87.1
Nitab4.5_0003634g0020 Nicotiana tabacum HOM05D007100 ORTHO05D008958 1.9e-63 246.5 214 84.1
Cc08_g00530 Coffea canephora HOM05D007100 ORTHO05D008958 8.4e-59 231.1 220 75.5
Thecc.09G023500 Theobroma cacao HOM05D007100 ORTHO05D008958 4.3e-55 218.8 222 69.4
Duzib168G1945 Durio zibethinus HOM05D007100 ORTHO05D008958 1.6e-54 216.9 218 72.5
Potri.006G255600 Populus trichocarpa HOM05D007100 ORTHO05D008958 2.1e-54 216.5 221 71.5
Potri.018G026500 Populus trichocarpa HOM05D007100 ORTHO05D008958 3.6e-54 215.7 221 72.9
Cpa.g.sc217.8 Carica papaya HOM05D007100 ORTHO05D008958 2.6e-52 209.5 222 69.8
Nitab4.5_0000109g0380 Nicotiana tabacum HOM05D007100 ORTHO05D008958 7.6e-52 208.0 156 94.2
Migut.A00035 Erythranthe guttata HOM05D007100 ORTHO05D008958 1.3e-51 207.2 227 70.0
Oeu057296.2 Olea europaea HOM05D007100 ORTHO05D008958 2.9e-51 206.1 226 70.8
Ah.16g104500 Amaranthus hybridus HOM05D007100 ORTHO05D008958 8.4e-51 204.5 226 69.9
COL.COLO4_18868 Corchorus olitorius HOM05D007100 ORTHO05D008958 1.1e-50 204.1 218 67.0
CSS0035808 Camellia sinensis var. sinensis HOM05D007100 ORTHO05D008958 1.4e-50 203.8 226 69.9
MD15G1126100 Malus domestica HOM05D007100 ORTHO05D008958 7.1e-50 201.4 221 68.8
CSS0028708 Camellia sinensis var. sinensis HOM05D007100 ORTHO05D008958 1.2e-49 200.7 226 69.5
Sabra18G0029100 Salix brachista HOM05D007100 ORTHO05D008958 2.1e-49 199.9 218 62.4
SGA_v2.0_scaffold20G09112 Striga asiatica HOM05D007100 ORTHO05D008958 3.5e-49 199.1 222 70.3
Prupe.1G482000 Prunus persica HOM05D007100 ORTHO05D008958 3.0e-48 196.1 223 70.9
TAR625G1529 Trochodendron aralioides HOM05D007100 ORTHO05D008958 3.0e-48 196.1 221 67.9
Manes.16G122700 Manihot esculenta HOM05D007100 ORTHO05D008958 2.5e-47 193.0 216 63.4
CsaV3_2G032160 Cucumis sativus L. HOM05D007100 ORTHO05D008958 4.3e-47 192.2 226 60.2
PSO210G6161 Papaver somniferum HOM05D007100 ORTHO05D008958 4.3e-47 192.2 224 66.1
Manes.03G013900 Manihot esculenta HOM05D007100 ORTHO05D008958 5.6e-47 191.8 215 66.5
Lsat_1_v5_gn_6_21280 Lactuca sativa HOM05D007100 ORTHO05D008958 1.6e-46 190.3 225 67.6
CANSAT25G0532 Cannabis sativa HOM05D007100 ORTHO05D008958 4.8e-46 188.7 225 62.2
CiPaw.03G162500 Carya illinoinensis HOM05D007100 ORTHO05D008958 4.8e-46 188.7 223 65.5
Ah.10g035800 Amaranthus hybridus HOM05D007100 ORTHO05D008958 6.2e-46 188.3 231 65.4
MELO3C011269.2 Cucumis melo HOM05D007100 ORTHO05D008958 1.4e-45 187.2 222 61.7
Aqoxy7G03649 Aquilegia oxysepala HOM05D007100 ORTHO05D008958 3.1e-45 186.0 222 67.6
Sed0021254 Sechium edule HOM05D007100 ORTHO05D008958 3.1e-45 186.0 222 64.4
RcHm_v2.0_Chr6g0297791 Rosa chinensis HOM05D007100 ORTHO05D008958 4.0e-45 185.7 221 66.5
FAN20G2791 Fragaria x ananassa HOM05D007100 ORTHO05D008958 5.3e-45 185.3 221 67.4
TWI32G1182 Tripterygium wilfordii HOM05D007100 ORTHO05D008958 9.0e-45 184.5 222 66.2
Atru.chr7.2441 Acer truncatum HOM05D007100 ORTHO05D008958 1.2e-44 184.1 225 61.8
PSO210G2345 Papaver somniferum HOM05D007100 ORTHO05D008958 1.2e-44 184.1 226 65.5
AT4G32260 Arabidopsis thaliana HOM05D007100 ORTHO05D008958 1.5e-44 183.7 226 67.3
Carub.0007s0834 Capsella rubella HOM05D007100 ORTHO05D008958 1.5e-44 183.7 226 66.4
FvH4_2g28951 Fragaria vesca HOM05D007100 ORTHO05D008958 1.5e-44 183.7 221 66.5
AL7G19610 Arabidopsis lyrata HOM05D007100 ORTHO05D008958 2.0e-44 183.3 226 66.4
Lalb_Chr08g0244131 Lupinus albus HOM05D007100 ORTHO05D008958 2.0e-44 183.3 220 64.5
ClCG08G013430 Citrullus lanatus HOM05D007100 ORTHO05D008958 2.6e-44 183.0 222 60.8
Lj1g0026662 Lotus japonicus HOM05D007100 ORTHO05D008958 2.6e-44 183.0 225 67.1
BcaC09g52005 Brassica carinata HOM05D007100 ORTHO05D008958 3.4e-44 182.6 222 62.6
Glyma.04G066000 Glycine max HOM05D007100 ORTHO05D008958 4.4e-44 182.2 222 65.3
BolC1t00671H Brassica oleracea HOM05D007100 ORTHO05D008958 5.8e-44 181.8 221 63.3
AUR62031529 Chenopodium quinoa HOM05D007100 ORTHO05D008958 5.8e-44 181.8 222 62.2
QL02p021503 Quercus lobata HOM05D007100 ORTHO05D008958 5.8e-44 181.8 220 63.6
VMungo1309G2169 Vigna mungo HOM05D007100 ORTHO05D008958 5.8e-44 181.8 222 60.4
BraA01t00579Z Brassica rapa HOM05D007100 ORTHO05D008958 1.7e-43 180.3 223 60.1
CARHR240140 Cardamine hirsuta HOM05D007100 ORTHO05D008958 3.8e-43 179.1 226 64.2
Eucgr.C02765 Eucalyptus grandis HOM05D007100 ORTHO05D008958 3.8e-43 179.1 230 63.9
AUR62012407 Chenopodium quinoa HOM05D007100 ORTHO05D008958 8.4e-43 177.9 160 76.9
unitig_32.g11115 Utricularia gibba HOM05D007100 ORTHO05D008958 1.9e-42 176.8 221 61.5
Hma1.2p1_0243F.1_g100880 Hydrangea macrophylla HOM05D007100 ORTHO05D008958 1.2e-41 174.1 222 64.0
Aa31LG2G17720 Aethionema arabicum HOM05D007100 ORTHO05D008958 2.1e-41 173.3 223 65.0
Cfa013136 Carpinus fangiana HOM05D007100 ORTHO05D008958 1.3e-40 170.6 228 61.0
Duzib150G1121 Durio zibethinus HOM05D007100 ORTHO05D008958 1.3e-40 170.6 218 64.2
PGR044G2669 Punica granatum HOM05D007100 ORTHO05D008958 1.3e-40 170.6 226 60.2
Thhalv10026214m.g Eutrema salsugineum HOM05D007100 ORTHO05D008958 6.6e-40 168.3 223 65.0
HanXRQChr13g0403031 Helianthus annuus HOM05D007100 ORTHO05D008958 1.1e-39 167.5 222 65.8
Sp7g29990 Schrenkiella parvula HOM05D007100 ORTHO05D008958 1.5e-39 167.2 225 62.2
CDE08G0375 Ceratophyllum demersum HOM05D007100 ORTHO05D008958 2.5e-39 166.4 226 63.3
Phvul.009G092366 Phaseolus vulgaris HOM05D007100 ORTHO05D008958 3.3e-39 166.0 225 60.4
ATR0800G074 Amborella trichopoda HOM05D007100 ORTHO05D008958 9.6e-39 164.5 144 64.6
CDE02G1895 Ceratophyllum demersum HOM05D007100 ORTHO05D008958 1.3e-38 164.1 219 65.3
ECA233G2559 Erigeron canadensis HOM05D007100 ORTHO05D008958 1.3e-38 164.1 221 64.3
Rhsim02G0202100 Rhododendron simsii HOM05D007100 ORTHO05D008958 2.8e-38 162.9 221 61.5
BcaNung03145 Brassica carinata HOM05D002526 ORTHO05D004039 4.8e-38 162.2 218 61.9
Nn2g12100 Nelumbo nucifera HOM05D007100 ORTHO05D008958 6.2e-38 161.8 167 75.4
TPR.G3111 Trifolium pratense HOM05D007100 ORTHO05D008958 8.1e-38 161.4 223 55.6
C01p06770 Brassica napus HOM05D002526 ORTHO05D004039 6.9e-37 158.3 169 59.2
Glyma.06G067400 Glycine max HOM05D007100 ORTHO05D008958 2.0e-36 156.8 222 59.5
A01p06140 Brassica napus HOM05D002526 ORTHO05D004039 4.5e-36 155.6 171 57.9
Nitab4.5_0011986g0010 Nicotiana tabacum HOM05D007100 ORTHO05D008958 7.6e-36 154.8 126 93.7
Ciclev10009435m.g Citrus clementina HOM05D007100 ORTHO05D008958 9.9e-36 154.5 222 49.5
MBI18_g07570_MAGBIO Magnolia biondii HOM05D007100 ORTHO05D008958 1.3e-35 154.1 216 59.3
Ca_15742_v3 Cicer arietinum L. HOM05D007100 ORTHO05D008958 1.7e-35 153.7 157 68.2
EL10Ac2g04205 Beta vulgaris HOM05D007100 ORTHO05D008958 2.2e-35 153.3 217 55.3
Medtr3g106820 Medicago truncatula HOM05D007100 ORTHO05D008958 1.8e-32 143.7 224 51.3
Dinv08635 Davidia involucrata HOM05D007100 ORTHO05D008958 1.1e-31 141.0 128 73.4
Lj7A724T61 Lonicera japonica HOM05D007100 ORTHO05D008958 1.5e-31 140.6 226 58.4
Sc09g0008150 Simmondsia chinensis HOM05D007100 ORTHO05D008958 2.8e-30 136.3 160 67.5
HPP92_017087 Vanilla planifolia HOM05D007100 ORTHO05D008958 4.9e-27 125.6 222 53.6
Nitab4.5_0002042g0090 Nicotiana tabacum HOM05D007100 ORTHO05D008958 1.4e-26 124.0 109 94.5
Os03g0278900 Oryza sativa ssp. japonica HOM05D007100 ORTHO05D008958 2.5e-26 123.2 158 66.5
Zm00001eb397520 Zea mays HOM05D007100 ORTHO05D008958 5.5e-26 122.1 149 69.8
CiPaw.05G145000 Carya illinoinensis HOM05D007100 ORTHO05D008958 1.8e-24 117.1 76 84.2
Sabra06G0199900 Salix brachista HOM05D007100 ORTHO05D008958 3.3e-23 112.8 106 82.1
Gohir.A07G028825 Gossypium hirsutum HOM05D007100 ORTHO05D008958 4.3e-23 112.5 106 84.9
Gohir.D07G032851 Gossypium hirsutum HOM05D007100 ORTHO05D008958 4.3e-23 112.5 106 76.4
SMO347G0047 Selaginella moellendorffii HOM05D007100 ORTHO05D008958 2.1e-22 110.2 146 65.1
AagrBONN_evm.TU.Sc2ySwM_117.789 Anthoceros agrestis HOM05D007100 ORTHO05D008958 1.8e-21 107.1 158 50.0
SEGI_36293 Sequoiadendron giganteum HOM05D007100 ORTHO05D008958 9.0e-21 104.8 93 62.4
Mapoly0061s0013 Marchantia polymorpha HOM05D007100 ORTHO05D008958 2.2e-19 100.1 163 57.1
Pp3c5_7810 Physcomitrium patens HOM05D007100 ORTHO05D008958 2.9e-19 99.8 179 54.2
Pp3c6_23221 Physcomitrium patens HOM05D007100 ORTHO05D008958 8.5e-19 98.2 164 56.1
Pp3c16_15270 Physcomitrium patens HOM05D007100 ORTHO05D008958 1.4e-18 97.4 105 53.3
Cre11.g481450 Chlamydomonas reinhardtii HOM05D007100 ORTHO05D008958 1.6e-17 94.0 162 35.8
HPP92_017015 Vanilla planifolia HOM05D007100 ORTHO05D008958 1.9e-15 87.0 103 50.5
RcHm_v2.0_Chr4g0429151 Rosa chinensis HOM05D007100 ORTHO05D008958 4.8e-14 82.4 60 71.7
CBR_g39245 Chara braunii HOM05D007100 ORTHO05D008958 1.1e-13 81.3 85 49.4
PRCOL_00004936 Prasinoderma coloniale HOM05D007100 ORTHO05D008958 9.0e-13 78.2 85 44.7
MCO01G691 Micromonas commoda HOM05D007100 ORTHO05D008958 5.5e-10 68.9 106 44.3
Psat2g007880 Pisum sativum HOM05D007100 ORTHO05D008958 1.0e-08 64.7 83 47.0
ATR0743G144 Amborella trichopoda HOM05D007100 ORTHO05D008958 4.4e-07 59.3 101 44.6
AUR62039691 Chenopodium quinoa HOM05D026575 ORTHO05D028765 4.8e-06 55.8 38 78.9


User provided reference genes

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