Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1228.30 Capsicum annuum HOM05D008195 ORTHO05D010950 5.5e-136 487.6 251 100.0
CAN.G479.1 Capsicum annuum HOM05D008195 ORTHO05D010950 6.0e-90 334.7 250 75.2
PGSC0003DMG400024640 Solanum tuberosum HOM05D008195 ORTHO05D000743 1.5e-69 266.9 252 60.3
CAN.G479.2 Capsicum annuum HOM05D008195 ORTHO05D010950 2.6e-69 266.2 250 63.2
Solyc03g115160.3 Solanum lycopersicum HOM05D008195 ORTHO05D000743 2.4e-62 243.0 252 56.7
Sopen03g034220 Solanum pennellii HOM05D008195 ORTHO05D000743 1.2e-61 240.7 252 56.3
Nitab4.5_0007689g0050 Nicotiana tabacum HOM05D008195 ORTHO05D000743 1.5e-56 223.8 252 53.6
CAN.G111.39 Capsicum annuum HOM05D008195 ORTHO05D000743 5.3e-54 215.3 246 52.8
Nitab4.5_0001485g0150 Nicotiana tabacum HOM05D008195 ORTHO05D000743 2.6e-53 213.0 270 50.0
Solyc03g115180.3 Solanum lycopersicum HOM05D008195 ORTHO05D000743 6.7e-49 198.4 253 47.4
Peaxi162Scf00201g00235 Petunia axillaris HOM05D008195 ORTHO05D000743 1.5e-48 197.2 256 47.7
PGSC0003DMG401020463 Solanum tuberosum HOM05D008195 ORTHO05D010950 2.6e-48 196.4 240 52.1
CAN.G479.4 Capsicum annuum HOM05D008195 ORTHO05D000743 1.2e-42 177.6 109 86.2
PGSC0003DMG400041231 Solanum tuberosum HOM05D008195 ORTHO05D010950 4.0e-41 172.6 206 50.5
Sopen06g021820 Solanum pennellii HOM05D008195 ORTHO05D000743 2.6e-40 169.9 241 47.3
Solyc06g066200.2 Solanum lycopersicum HOM05D008195 ORTHO05D000743 7.5e-40 168.3 241 46.5
PGSC0003DMG400020472 Solanum tuberosum HOM05D008195 ORTHO05D000743 1.2e-34 151.0 205 47.8
Solyc06g066140.3 Solanum lycopersicum HOM05D008195 ORTHO05D000743 1.6e-34 150.6 234 43.2
Sopen06g024610 Solanum pennellii HOM05D008195 ORTHO05D000743 4.7e-34 149.1 182 50.5
PGSC0003DMG400040653 Solanum tuberosum HOM05D008195 ORTHO05D010950 1.2e-32 144.4 158 52.5
PGSC0003DMG400026134 Solanum tuberosum HOM05D008195 ORTHO05D000743 3.4e-32 142.9 143 55.9
Sopen03g034240 Solanum pennellii HOM05D008195 ORTHO05D000743 2.2e-31 140.2 253 39.1
Sopen06g021660 Solanum pennellii HOM05D000006 ORTHO05D000001 1.6e-29 134.0 153 48.4
CAN.G675.32 Capsicum annuum HOM05D008195 ORTHO05D010950 1.0e-28 131.3 107 64.5
Sopen06g024520 Solanum pennellii HOM05D008195 ORTHO05D010950 1.9e-27 127.1 194 45.9
PGSC0003DMG400035870 Solanum tuberosum HOM05D008195 ORTHO05D010950 7.2e-27 125.2 154 48.1
Solyc01g010500.3 Solanum lycopersicum HOM05D001818 ORTHO05D001780 9.4e-27 124.8 104 61.5
Solyc06g066360.3 Solanum lycopersicum HOM05D008195 ORTHO05D000743 1.2e-26 124.4 137 49.6
PGSC0003DMG400037001 Solanum tuberosum HOM05D008195 ORTHO05D000743 4.0e-25 119.4 113 57.5
PGSC0003DMG400023177 Solanum tuberosum HOM05D008195 ORTHO05D010950 6.3e-23 112.1 207 41.1
CAN.G479.7 Capsicum annuum HOM05D008195 ORTHO05D010950 3.8e-20 102.8 74 68.9
Dinv22785 Davidia involucrata HOM05D001093 ORTHO05D000743 2.1e-18 97.1 133 39.1
Dinv17406 Davidia involucrata HOM05D001093 ORTHO05D000743 4.7e-18 95.9 260 28.8
PGSC0003DMG400016768 Solanum tuberosum HOM05D008195 ORTHO05D010950 4.7e-18 95.9 105 48.6
SGA_v2.0_scaffold313G48311 Striga asiatica HOM05D001093 ORTHO05D000743 1.8e-17 94.0 122 43.4
CSS0005519 Camellia sinensis var. sinensis HOM05D001093 ORTHO05D000743 1.5e-16 90.9 258 29.8
Cc00_g03840 Coffea canephora HOM05D001093 ORTHO05D000743 1.5e-16 90.9 122 41.0
Rhsim12G0151100 Rhododendron simsii HOM05D001093 ORTHO05D000743 1.5e-16 90.9 128 39.1
Actinidia16122 Actinidia chinensis HOM05D001093 ORTHO05D000743 9.8e-16 88.2 180 32.8
CAN.G282.35 Capsicum annuum HOM05D008195 ORTHO05D010950 9.8e-16 88.2 87 54.0
Rhsim08G0146400 Rhododendron simsii HOM05D001093 ORTHO05D000743 1.3e-15 87.8 130 34.6
vmacro16499 Vaccinium macrocarpon HOM05D001093 ORTHO05D000743 1.7e-15 87.4 122 38.5
Sopen06g024280 Solanum pennellii HOM05D008195 ORTHO05D000743 2.2e-15 87.0 88 58.0
vmacro17606 Vaccinium macrocarpon HOM05D001093 ORTHO05D000743 4.9e-15 85.9 118 36.4
Oeu047262.2 Olea europaea HOM05D001093 ORTHO05D000743 8.3e-15 85.1 129 39.5
SalBow5G5623 Salvia bowleyana HOM05D001093 ORTHO05D000743 8.3e-15 85.1 123 40.7
MSTRG.22985 Avicennia marina HOM05D001093 ORTHO05D000743 1.1e-14 84.7 122 40.2
Migut.I00329 Erythranthe guttata HOM05D001093 ORTHO05D000743 1.1e-14 84.7 157 33.8
PGSC0003DMG400016782 Solanum tuberosum HOM05D008195 ORTHO05D010950 5.4e-14 82.4 61 60.7
Lj5A103G64 Lonicera japonica HOM05D001093 ORTHO05D000743 7.8e-13 78.6 130 37.7
Manes.06G085200 Manihot esculenta HOM05D007909 ORTHO05D010605 1.3e-12 77.8 147 38.1
Sopen01g006140 Solanum pennellii HOM05D001818 ORTHO05D001780 1.1e-11 74.7 62 59.7
QL03p072663 Quercus lobata HOM05D001093 ORTHO05D000743 3.3e-11 73.2 255 28.6
TAR629G2812 Trochodendron aralioides HOM05D001093 ORTHO05D000743 4.3e-11 72.8 122 35.2
QL03p072752 Quercus lobata HOM05D001093 ORTHO05D000743 9.5e-11 71.6 255 28.6
AUR62021572 Chenopodium quinoa HOM05D001093 ORTHO05D000743 1.6e-10 70.9 153 28.8
AUR62008519 Chenopodium quinoa HOM05D001093 ORTHO05D000743 3.6e-10 69.7 153 28.8
Actinidia35035 Actinidia chinensis HOM05D001093 ORTHO05D000743 4.7e-10 69.3 128 32.8
Cfa019304 Carpinus fangiana HOM05D001093 ORTHO05D000743 1.0e-09 68.2 257 29.6
arahy.Tifrunner.gnm1.ann1.7R0RVH Arachis hypogaea HOM05D001093 ORTHO05D000743 4.0e-09 66.2 250 25.6
CiPaw.12G008400 Carya illinoinensis HOM05D007909 ORTHO05D000743 4.0e-09 66.2 126 34.9
TAR629G0348 Trochodendron aralioides HOM05D001391 ORTHO05D000743 4.0e-09 66.2 119 36.1
Haze_07687 Corylus avellana HOM05D007909 ORTHO05D000743 1.5e-08 64.3 204 28.9
PSO801G0246 Papaver somniferum HOM05D001093 ORTHO05D000743 1.5e-08 64.3 118 33.9
FvH4_5g13930 Fragaria vesca HOM05D007909 ORTHO05D000743 2.0e-08 63.9 133 35.3
HPP92_020444 Vanilla planifolia HOM05D001093 ORTHO05D000743 2.6e-08 63.5 114 31.6
PSO339G4557 Papaver somniferum HOM05D001093 ORTHO05D000743 3.4e-08 63.2 118 33.9
Hund02591 Selenicereus undatus HOM05D001093 ORTHO05D000743 3.4e-08 63.2 119 34.5
unitig_749.g13437 Utricularia gibba HOM05D008195 ORTHO05D000743 3.4e-08 63.2 213 30.0
FAN08G2750 Fragaria x ananassa HOM05D007909 ORTHO05D000743 5.8e-08 62.4 125 34.4
FvH4_4g13540 Fragaria vesca HOM05D007909 ORTHO05D000743 9.8e-08 61.6 150 29.3
FAN18G3687 Fragaria x ananassa HOM05D007909 ORTHO05D000743 1.3e-07 61.2 131 35.1
Ah.11g047850 Amaranthus hybridus HOM05D008195 ORTHO05D000743 3.7e-07 59.7 134 26.9
QL10p019356 Quercus lobata HOM05D001093 ORTHO05D010605 4.9e-07 59.3 125 34.4
Solyc06g066040.2 Solanum lycopersicum HOM05D008195 ORTHO05D010950 4.9e-07 59.3 185 33.0
TWI60G0473 Tripterygium wilfordii HOM05D007909 ORTHO05D000743 4.9e-07 59.3 122 33.6
Sc12g0006650 Simmondsia chinensis HOM05D001093 ORTHO05D000743 8.3e-07 58.5 131 31.3
FAN17G0179 Fragaria x ananassa HOM05D000009 ORTHO05D000008 1.1e-06 58.2 137 29.9
EL10Ac5g11120 Beta vulgaris HOM05D015602 ORTHO05D006373 1.4e-06 57.8 143 30.8
AL1G51860 Arabidopsis lyrata HOM05D001093 ORTHO05D000743 2.4e-06 57.0 122 29.5
arahy.Tifrunner.gnm1.ann1.ER6SHV Arachis hypogaea HOM05D008195 ORTHO05D000743 2.4e-06 57.0 262 23.7
FAN08G3156 Fragaria x ananassa HOM05D008195 ORTHO05D000743 4.1e-06 56.2 136 30.1
Haze_07714 Corylus avellana HOM05D007909 ORTHO05D000743 5.4e-06 55.8 127 35.4
Gohir.A12G182333 Gossypium hirsutum HOM05D008195 ORTHO05D000743 9.2e-06 55.1 122 30.3


User provided reference genes

Program Settings