Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1227.14 Capsicum annuum HOM05D007031 ORTHO05D008815 2.9e-96 355.1 168 100.0
Solyc08g007380.4 Solanum lycopersicum HOM05D007031 ORTHO05D008815 3.1e-74 282.0 166 84.9
Sopen08g003330 Solanum pennellii HOM05D007031 ORTHO05D008815 2.2e-72 275.8 152 87.5
Lj2g0002187 Lotus japonicus HOM05D007031 ORTHO05D008815 3.9e-61 238.4 156 73.7
Actinidia14432 Actinidia chinensis HOM05D007031 ORTHO05D008815 9.7e-60 233.8 145 74.5
Glyma.11G032300 Glycine max HOM05D007031 ORTHO05D008815 1.6e-59 233.0 141 75.9
TPR.G25905 Trifolium pratense HOM05D007031 ORTHO05D008815 4.8e-59 231.5 141 75.9
Psat2g177560 Pisum sativum HOM05D007031 ORTHO05D008815 6.3e-59 231.1 141 76.6
Cc08_g12500 Coffea canephora HOM05D007031 ORTHO05D008815 8.2e-59 230.7 156 70.5
PSO386G0128 Papaver somniferum HOM05D007031 ORTHO05D008815 1.1e-58 230.3 143 72.7
Phvul.002G062701 Phaseolus vulgaris HOM05D007031 ORTHO05D008815 1.8e-58 229.6 144 74.3
CSS0040909 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 4.1e-58 228.4 150 73.3
Duzib205G0920 Durio zibethinus HOM05D007031 ORTHO05D008815 5.3e-58 228.0 143 73.4
Lalb_Chr09g0324411 Lupinus albus HOM05D007031 ORTHO05D008815 1.5e-57 226.5 142 75.4
Gohir.D08G188900 Gossypium hirsutum HOM05D007031 ORTHO05D008815 2.0e-57 226.1 136 75.0
Gorai.004G199000 Gossypium raimondii HOM05D007031 ORTHO05D008815 2.0e-57 226.1 136 75.0
MSTRG.13772 Avicennia marina HOM05D007031 ORTHO05D008815 3.4e-57 225.3 139 74.8
Dinv21635 Davidia involucrata HOM05D007031 ORTHO05D008815 4.5e-57 224.9 141 74.5
PSO724G0679 Papaver somniferum HOM05D007031 ORTHO05D008815 5.9e-57 224.6 136 73.5
Potri.003G076400 Populus trichocarpa HOM05D007031 ORTHO05D008815 2.2e-56 222.6 141 73.8
TWI60G0154 Tripterygium wilfordii HOM05D007031 ORTHO05D008815 6.5e-56 221.1 141 70.9
TAR636G3191 Trochodendron aralioides HOM05D007031 ORTHO05D008815 1.1e-55 220.3 136 74.3
DCAR_027778 Daucus carota HOM05D007031 ORTHO05D008815 1.4e-55 219.9 143 71.3
ECA232G3888 Erigeron canadensis HOM05D007031 ORTHO05D008815 1.4e-55 219.9 141 70.9
THA.LOC104815489 Tarenaya hassleriana HOM05D007031 ORTHO05D008815 1.4e-55 219.9 141 73.0
Lsat_1_v5_gn_5_187960 Lactuca sativa HOM05D007031 ORTHO05D008815 5.5e-55 218.0 140 70.0
Peaxi162Scf00102g01143 Petunia axillaris HOM05D007031 ORTHO05D008815 7.2e-55 217.6 120 82.5
Carub.0007s2484 Capsella rubella HOM05D007031 ORTHO05D008815 9.4e-55 217.2 146 69.9
Os04g0535400 Oryza sativa ssp. japonica HOM05D007031 ORTHO05D008815 1.2e-54 216.9 153 68.0
Lj2A217G30 Lonicera japonica HOM05D007031 ORTHO05D008815 1.6e-54 216.5 143 69.9
Eucgr.E00427 Eucalyptus grandis HOM05D007031 ORTHO05D008815 6.1e-54 214.5 142 69.0
RcHm_v2.0_Chr7g0203161 Rosa chinensis HOM05D007031 ORTHO05D008815 6.1e-54 214.5 140 72.9
CANSAT21G0077 Cannabis sativa HOM05D007031 ORTHO05D008815 7.9e-54 214.2 138 71.0
CARHR223050 Cardamine hirsuta HOM05D007031 ORTHO05D008815 7.9e-54 214.2 144 68.1
Migut.E00966 Erythranthe guttata HOM05D007031 ORTHO05D008815 1.0e-53 213.8 140 69.3
FvH4_5g18810 Fragaria vesca HOM05D007031 ORTHO05D008815 1.0e-53 213.8 140 71.4
FAN18G3883 Fragaria x ananassa HOM05D007031 ORTHO05D008815 1.0e-53 213.8 140 71.4
BcaC09g50373 Brassica carinata HOM05D007031 ORTHO05D008815 1.4e-53 213.4 141 68.1
Migut.E01683 Erythranthe guttata HOM05D007031 ORTHO05D008815 1.4e-53 213.4 140 69.3
Ciclev10022693m.g Citrus clementina HOM05D007031 ORTHO05D008815 1.8e-53 213.0 140 68.6
FAN08G1843 Fragaria x ananassa HOM05D007031 ORTHO05D008815 2.3e-53 212.6 140 70.0
arahy.Tifrunner.gnm1.ann1.R85P7C Arachis hypogaea HOM05D007031 ORTHO05D008815 8.8e-53 210.7 140 69.3
AT4G16566 Arabidopsis thaliana HOM05D007031 ORTHO05D008815 1.5e-52 209.9 144 68.1
arahy.Tifrunner.gnm1.ann1.WL6NYT Arachis hypogaea HOM05D007031 ORTHO05D008815 1.5e-52 209.9 140 68.6
Cfa012711 Carpinus fangiana HOM05D007031 ORTHO05D008815 1.5e-52 209.9 140 69.3
CiPaw.12G109600 Carya illinoinensis HOM05D007031 ORTHO05D008815 1.5e-52 209.9 143 65.7
BcaNung00171 Brassica carinata HOM05D007031 ORTHO05D008815 2.0e-52 209.5 141 68.8
CDE09G0628 Ceratophyllum demersum HOM05D005321 ORTHO05D006360 2.0e-52 209.5 139 67.6
Gohir.A08G170700 Gossypium hirsutum HOM05D007031 ORTHO05D008815 2.5e-52 209.1 140 70.7
Aa31LG2G12690 Aethionema arabicum HOM05D007031 ORTHO05D008815 3.3e-52 208.8 141 67.4
HPP92_021039 Vanilla planifolia HOM05D007031 ORTHO05D008815 3.3e-52 208.8 136 70.6
HPP92_027426 Vanilla planifolia HOM05D007031 ORTHO05D008815 3.3e-52 208.8 136 70.6
BolC1t02559H Brassica oleracea HOM05D007031 ORTHO05D008815 4.3e-52 208.4 142 68.3
FAN13G0327 Fragaria x ananassa HOM05D007031 ORTHO05D008815 7.4e-52 207.6 140 70.0
Aqoxy5G01014 Aquilegia oxysepala HOM05D007031 ORTHO05D008815 1.3e-51 206.8 141 68.1
AL7G38260 Arabidopsis lyrata HOM05D007031 ORTHO05D008815 1.7e-51 206.5 144 66.7
Sed0003740 Sechium edule HOM05D007031 ORTHO05D008815 2.2e-51 206.1 136 69.9
Thhalv10026497m.g Eutrema salsugineum HOM05D007031 ORTHO05D008815 2.8e-51 205.7 141 68.1
BraA01t02001Z Brassica rapa HOM05D007031 ORTHO05D008815 4.8e-51 204.9 142 66.9
Hma1.2p1_0316F.1_g123210 Hydrangea macrophylla HOM05D007031 ORTHO05D008815 4.8e-51 204.9 117 77.8
unitig_699.g19776 Utricularia gibba HOM05D007031 ORTHO05D008815 8.2e-51 204.1 117 77.8
CSS0002961 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 1.4e-50 203.4 146 67.8
CsaV3_5G004200 Cucumis sativus L. HOM05D007031 ORTHO05D008815 1.2e-49 200.3 144 68.1
Atru.chr9.1322 Acer truncatum HOM05D007031 ORTHO05D008815 3.8e-48 195.3 116 75.0
ATR0317G125 Amborella trichopoda HOM05D007031 ORTHO05D008815 3.8e-48 195.3 136 68.4
EL10Ac5g13074 Beta vulgaris HOM05D007031 ORTHO05D008815 8.5e-48 194.1 170 56.5
MBI04_g09491_MAGBIO Magnolia biondii HOM05D007031 ORTHO05D008815 1.4e-47 193.4 184 52.7
Nitab4.5_0000712g0190 Nicotiana tabacum HOM05D007031 ORTHO05D008815 1.9e-47 193.0 174 58.6
AL7G38210 Arabidopsis lyrata HOM05D007031 ORTHO05D008815 4.2e-47 191.8 122 71.3
ClCG01G004020 Citrullus lanatus HOM05D007031 ORTHO05D008815 7.2e-47 191.0 164 59.1
VMungo1215G1202 Vigna mungo HOM05D007031 ORTHO05D008815 1.2e-46 190.3 113 74.3
SEGI_08804 Sequoiadendron giganteum HOM05D007031 ORTHO05D008815 1.8e-45 186.4 136 63.2
Manes.02G039100 Manihot esculenta HOM05D007031 ORTHO05D008815 3.3e-44 182.2 118 72.0
MD04G1063700 Malus domestica HOM05D007031 ORTHO05D008815 4.4e-44 181.8 112 74.1
BcaNung02861 Brassica carinata HOM05D007031 ORTHO05D008815 9.7e-44 180.6 135 63.7
vmacro16391 Vaccinium macrocarpon HOM05D007031 ORTHO05D008815 2.2e-43 179.5 102 80.4
Hund14533 Selenicereus undatus HOM05D007031 ORTHO05D008815 1.4e-42 176.8 102 77.5
QL12p012249 Quercus lobata HOM05D007031 ORTHO05D008815 7.7e-41 171.0 252 39.3
C01p26150 Brassica napus HOM05D007031 ORTHO05D008815 8.5e-40 167.5 124 65.3
Sabra03G0047000 Salix brachista HOM05D007031 ORTHO05D008815 8.5e-40 167.5 158 55.7
A01p20650 Brassica napus HOM05D007031 ORTHO05D008815 4.2e-39 165.2 124 64.5
FAN14G5160 Fragaria x ananassa HOM05D007031 ORTHO05D008815 2.1e-38 162.9 140 56.4
AUR62042788 Chenopodium quinoa HOM05D007031 ORTHO05D008815 3.6e-38 162.2 108 69.4
Zm00001eb427450 Zea mays HOM05D007031 ORTHO05D008815 8.0e-38 161.0 102 67.6
Pp3c5_26880 Physcomitrium patens HOM05D007031 ORTHO05D008815 6.7e-37 157.9 145 51.0
BolC7t45328H Brassica oleracea HOM05D007031 ORTHO05D008815 3.3e-36 155.6 125 61.6
MELO3C005535.2 Cucumis melo HOM05D007031 ORTHO05D008815 7.5e-36 154.5 102 71.6
Sp7g15180 Schrenkiella parvula HOM05D007031 ORTHO05D008815 1.3e-35 153.7 150 51.3
CSS0026472 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 4.8e-35 151.8 143 56.6
AUR62007512 Chenopodium quinoa HOM05D007031 ORTHO05D008815 6.3e-35 151.4 89 75.3
Prupe.5G068700 Prunus persica HOM05D007031 ORTHO05D008815 4.1e-34 148.7 143 51.7
SMO274G0074 Selaginella moellendorffii HOM05D007031 ORTHO05D008815 7.7e-33 144.4 141 48.2
Nitab4.5_0002225g0110 Nicotiana tabacum HOM05D007031 ORTHO05D008815 1.7e-32 143.3 144 56.9
CiPaw.11G153700 Carya illinoinensis HOM05D007031 ORTHO05D008815 3.8e-32 142.1 101 64.4
SalBow6G3941 Salvia bowleyana HOM05D007031 ORTHO05D008815 2.7e-30 136.0 105 59.0
Sc22g0000840 Simmondsia chinensis HOM05D007031 ORTHO05D008815 1.0e-29 134.0 86 72.1
BcaC06g33496 Brassica carinata HOM05D007031 ORTHO05D008815 1.8e-29 133.3 93 69.9
SMO134G0120 Selaginella moellendorffii HOM05D000076 ORTHO05D001279 1.8e-29 133.3 115 51.3
C07p48030 Brassica napus HOM05D007337 ORTHO05D004972 3.0e-29 132.5 114 60.5
FAN04G1478 Fragaria x ananassa HOM05D007031 ORTHO05D008815 5.2e-29 131.7 79 74.7
GSVIVG01001319001 Vitis vinifera HOM05D007031 ORTHO05D008815 2.6e-28 129.4 88 71.6
Nn6g33971 Nelumbo nucifera HOM05D007031 ORTHO05D008815 9.8e-28 127.5 76 73.7
Oeu062969.1 Olea europaea HOM05D007031 ORTHO05D008815 9.8e-28 127.5 141 47.5
FAN02G0786 Fragaria x ananassa HOM05D007031 ORTHO05D008815 1.7e-27 126.7 100 61.0
Pp3c6_3420 Physcomitrium patens HOM05D029721 ORTHO05D008815 6.3e-27 124.8 133 49.6
A03p50000 Brassica napus HOM05D007337 ORTHO05D004972 8.3e-27 124.4 113 56.6
THA.LOC104815507 Tarenaya hassleriana HOM05D007031 ORTHO05D008815 4.1e-26 122.1 73 75.3
MCO15G691 Micromonas commoda HOM05D007031 ORTHO05D008815 2.9e-24 115.9 123 46.3
Haze_07923 Corylus avellana HOM05D007031 ORTHO05D008815 8.5e-24 114.4 140 46.4
Medtr5g012525 Medicago truncatula HOM05D007031 ORTHO05D008815 4.2e-23 112.1 68 76.5
Cre03.g169200 Chlamydomonas reinhardtii HOM05D007031 ORTHO05D008815 9.4e-23 110.9 121 42.1
SEGI_18261 Sequoiadendron giganteum HOM05D007031 ORTHO05D008815 5.2e-21 105.1 99 53.5
Thecc.03G252200 Theobroma cacao HOM05D007031 ORTHO05D008815 5.4e-18 95.1 83 56.6
FAN05G5584 Fragaria x ananassa HOM05D007031 ORTHO05D008815 2.3e-13 79.7 59 64.4
Cre06.g273000 Chlamydomonas reinhardtii HOM05D002397 ORTHO05D002667 6.6e-08 61.6 118 33.1
CDE04G2843 Ceratophyllum demersum HOM05D002397 ORTHO05D002667 1.1e-07 60.8 101 37.6
COL.COLO4_37184 Corchorus olitorius HOM05D007031 ORTHO05D008815 1.1e-07 60.8 47 66.0
AagrBONN_evm.TU.Sc2ySwM_344.2061 Anthoceros agrestis HOM05D002397 ORTHO05D002667 1.9e-07 60.1 101 35.6
HanXRQChr17g0549671 Helianthus annuus HOM05D007031 ORTHO05D008815 2.5e-07 59.7 42 66.7
Nn7g38244 Nelumbo nucifera HOM05D002397 ORTHO05D002667 2.5e-07 59.7 118 33.1
TAR629G2980 Trochodendron aralioides HOM05D002397 ORTHO05D002667 2.5e-07 59.7 107 38.3
HanXRQChr14g0447211 Helianthus annuus HOM05D002397 ORTHO05D002667 9.5e-07 57.8 111 36.0
PSO675G0625 Papaver somniferum HOM05D002397 ORTHO05D002667 9.5e-07 57.8 110 32.7
Hund14535 Selenicereus undatus HOM05D007031 ORTHO05D008815 9.5e-07 57.8 48 56.2
SEGI_32624 Sequoiadendron giganteum HOM05D002397 ORTHO05D002667 1.2e-06 57.4 107 36.4
Psat1g087400 Pisum sativum HOM05D002397 ORTHO05D002667 2.1e-06 56.6 101 36.6
PSO541G0999 Papaver somniferum HOM05D002397 ORTHO05D002667 2.8e-06 56.2 101 36.6
Haze_26654 Corylus avellana HOM05D002397 ORTHO05D002667 3.6e-06 55.8 76 38.2
ECA238G1645 Erigeron canadensis HOM05D002397 ORTHO05D002667 3.6e-06 55.8 106 35.8
PSO675G5290 Papaver somniferum HOM05D002397 ORTHO05D002667 3.6e-06 55.8 101 35.6
Aqoxy7G03928 Aquilegia oxysepala HOM05D002397 ORTHO05D002667 4.7e-06 55.5 118 32.2
PSO017G1677 Papaver somniferum HOM05D002397 ORTHO05D002667 4.7e-06 55.5 110 31.8
Atru.chr10.561 Acer truncatum HOM05D002397 ORTHO05D002667 8.0e-06 54.7 101 36.6


User provided reference genes

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