Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1211.3 Capsicum annuum HOM05D004765 ORTHO05D005900 1.9e-75 285.8 148 100.0
Nitab4.5_0003068g0090 Nicotiana tabacum HOM05D004765 ORTHO05D005900 4.2e-59 231.5 147 81.6
Nitab4.5_0000227g0370 Nicotiana tabacum HOM05D004765 ORTHO05D005900 1.6e-58 229.6 147 81.0
Peaxi162Scf00345g01023 Petunia axillaris HOM05D004765 ORTHO05D005900 2.1e-58 229.2 147 80.3
Solyc01g009380.3 Solanum lycopersicum HOM05D004765 ORTHO05D005900 2.1e-58 229.2 147 80.3
CAN.G198.33 Capsicum annuum HOM05D004765 ORTHO05D005900 2.0e-56 222.6 147 77.6
Cc01_g08830 Coffea canephora HOM05D004765 ORTHO05D005900 4.1e-54 214.9 147 72.1
Nitab4.5_0008177g0070 Nicotiana tabacum HOM05D004765 ORTHO05D005900 9.1e-54 213.8 147 74.1
Atru.chr3.3169 Acer truncatum HOM05D004765 ORTHO05D005900 4.5e-53 211.5 147 72.8
CSS0013873 Camellia sinensis var. sinensis HOM05D004765 ORTHO05D005900 7.7e-53 210.7 147 72.1
CSS0028820 Camellia sinensis var. sinensis HOM05D004765 ORTHO05D005900 7.7e-53 210.7 147 72.1
vmacro14340 Vaccinium macrocarpon HOM05D004765 ORTHO05D005900 7.7e-53 210.7 147 70.1
Nitab4.5_0000731g0090 Nicotiana tabacum HOM05D004765 ORTHO05D005900 1.7e-52 209.5 147 72.8
Migut.N02474 Erythranthe guttata HOM05D004765 ORTHO05D005900 5.0e-52 208.0 147 72.1
Oeu051604.1 Olea europaea HOM05D004765 ORTHO05D005900 6.5e-52 207.6 147 71.4
Peaxi162Scf00224g00217 Petunia axillaris HOM05D004765 ORTHO05D005900 1.1e-51 206.8 147 72.1
GSVIVG01036081001 Vitis vinifera HOM05D004765 ORTHO05D005900 1.1e-51 206.8 147 70.7
Haze_23347 Corylus avellana HOM05D004765 ORTHO05D005900 1.9e-51 206.1 147 71.4
HanXRQChr11g0343661 Helianthus annuus HOM05D004765 ORTHO05D005900 4.2e-51 204.9 147 70.1
TWI31G1403 Tripterygium wilfordii HOM05D004765 ORTHO05D005900 5.5e-51 204.5 147 68.7
Cfa009988 Carpinus fangiana HOM05D004765 ORTHO05D005900 7.2e-51 204.1 147 70.7
Manes.11G164300 Manihot esculenta HOM05D004765 ORTHO05D005900 7.2e-51 204.1 147 66.7
Dinv22819 Davidia involucrata HOM05D004765 ORTHO05D005900 9.4e-51 203.8 147 70.1
MD03G1149800 Malus domestica HOM05D004765 ORTHO05D005900 9.4e-51 203.8 147 70.7
Dinv08934 Davidia involucrata HOM05D004765 ORTHO05D005900 1.6e-50 203.0 147 70.7
Lj1A257T30 Lonicera japonica HOM05D004765 ORTHO05D005900 1.6e-50 203.0 147 70.1
DCAR_006171 Daucus carota HOM05D004765 ORTHO05D005900 2.7e-50 202.2 147 68.7
MD11G1168600 Malus domestica HOM05D004765 ORTHO05D005900 2.7e-50 202.2 147 70.7
Sopen11g027390 Solanum pennellii HOM05D004765 ORTHO05D005900 2.7e-50 202.2 147 70.7
Cpa.g.sc195.23 Carica papaya HOM05D004765 ORTHO05D005900 4.7e-50 201.4 147 69.4
Migut.D02428 Erythranthe guttata HOM05D004765 ORTHO05D005900 4.7e-50 201.4 146 69.9
CSS0015967 Camellia sinensis var. sinensis HOM05D004765 ORTHO05D005900 6.1e-50 201.1 147 68.0
Prupe.6G135800 Prunus persica HOM05D004765 ORTHO05D005900 6.1e-50 201.1 147 70.1
Thecc.09G278900 Theobroma cacao HOM05D004765 ORTHO05D005900 6.1e-50 201.1 147 67.3
Ciclev10028115m.g Citrus clementina HOM05D004765 ORTHO05D005900 8.0e-50 200.7 147 70.1
TWI79G1303 Tripterygium wilfordii HOM05D004765 ORTHO05D005900 1.0e-49 200.3 147 66.7
CSS0022046 Camellia sinensis var. sinensis HOM05D004765 ORTHO05D005900 1.4e-49 199.9 147 68.0
Potri.009G160400 Populus trichocarpa HOM05D004765 ORTHO05D005900 1.4e-49 199.9 147 68.7
CAN.G745.10 Capsicum annuum HOM05D004765 ORTHO05D005900 1.8e-49 199.5 147 68.0
Potri.004G198200 Populus trichocarpa HOM05D004765 ORTHO05D005900 1.8e-49 199.5 147 67.3
Lj3g0002417 Lotus japonicus HOM05D004765 ORTHO05D005900 2.3e-49 199.1 147 66.7
Lalb_Chr01g0004931 Lupinus albus HOM05D004765 ORTHO05D005900 2.3e-49 199.1 147 68.0
Solyc11g068670.2 Solanum lycopersicum HOM05D004765 ORTHO05D005900 2.3e-49 199.1 147 70.1
Actinidia24229 Actinidia chinensis HOM05D004765 ORTHO05D005900 3.0e-49 198.7 147 68.7
COL.COLO4_34006 Corchorus olitorius HOM05D004765 ORTHO05D005900 4.0e-49 198.4 147 66.7
Phvul.011G096100 Phaseolus vulgaris HOM05D004765 ORTHO05D005900 4.0e-49 198.4 147 65.3
QL01p011857 Quercus lobata HOM05D004765 ORTHO05D005900 4.0e-49 198.4 147 68.7
TPR.G17196 Trifolium pratense HOM05D004765 ORTHO05D005900 4.0e-49 198.4 147 67.3
ECA248G3663 Erigeron canadensis HOM05D004765 ORTHO05D005900 5.2e-49 198.0 147 68.0
RcHm_v2.0_Chr5g0045881 Rosa chinensis HOM05D004765 ORTHO05D005900 5.2e-49 198.0 147 70.1
CiPaw.14G098100 Carya illinoinensis HOM05D004765 ORTHO05D005900 6.8e-49 197.6 147 67.3
PGR119G0504 Punica granatum HOM05D004765 ORTHO05D005900 6.8e-49 197.6 147 66.7
MSTRG.18770 Avicennia marina HOM05D004765 ORTHO05D005900 8.8e-49 197.2 147 68.7
Duzib168G0312 Durio zibethinus HOM05D004765 ORTHO05D005900 8.8e-49 197.2 147 66.0
arahy.Tifrunner.gnm1.ann1.E8Y1JT Arachis hypogaea HOM05D004765 ORTHO05D005900 1.5e-48 196.4 147 68.0
arahy.Tifrunner.gnm1.ann1.HXUJ4C Arachis hypogaea HOM05D004765 ORTHO05D005900 1.5e-48 196.4 147 68.0
ClCG01G011820 Citrullus lanatus HOM05D004765 ORTHO05D005900 1.5e-48 196.4 147 68.7
Glyma.12G091700 Glycine max HOM05D004765 ORTHO05D005900 2.0e-48 196.1 147 66.0
Oeu014468.1 Olea europaea HOM05D004765 ORTHO05D005900 2.0e-48 196.1 147 70.1
Actinidia07259 Actinidia chinensis HOM05D004765 ORTHO05D005900 3.4e-48 195.3 147 68.0
Ca_19442_v3 Cicer arietinum L. HOM05D004765 ORTHO05D005900 4.4e-48 194.9 147 65.3
Nn6g34806 Nelumbo nucifera HOM05D004765 ORTHO05D005900 4.4e-48 194.9 146 67.8
Sabra09G0125600 Salix brachista HOM05D004765 ORTHO05D005900 5.7e-48 194.5 155 66.5
Hund20934 Selenicereus undatus HOM05D004765 ORTHO05D005900 7.5e-48 194.1 147 66.7
SGA_v2.0_scaffold177G39433 Striga asiatica HOM05D004765 ORTHO05D005900 7.5e-48 194.1 147 68.0
FAN11G2377 Fragaria x ananassa HOM05D004765 ORTHO05D005900 9.8e-48 193.7 147 67.3
Sc12g0004610 Simmondsia chinensis HOM05D004765 ORTHO05D005900 9.8e-48 193.7 147 66.0
Sc12g0004660 Simmondsia chinensis HOM05D004765 ORTHO05D005900 9.8e-48 193.7 147 66.0
VMungo1127G1239 Vigna mungo HOM05D004765 ORTHO05D005900 1.3e-47 193.4 147 63.9
Eucgr.J00522 Eucalyptus grandis HOM05D004765 ORTHO05D005900 2.2e-47 192.6 146 66.4
FAN16G1441 Fragaria x ananassa HOM05D004765 ORTHO05D005900 2.2e-47 192.6 147 67.3
Sed0019641 Sechium edule HOM05D004765 ORTHO05D005900 2.2e-47 192.6 147 66.7
Gohir.A09G097000 Gossypium hirsutum HOM05D004765 ORTHO05D005900 2.8e-47 192.2 147 65.3
Gohir.D09G096800 Gossypium hirsutum HOM05D004765 ORTHO05D005900 2.8e-47 192.2 147 65.3
Gorai.006G113500 Gossypium raimondii HOM05D004765 ORTHO05D005900 2.8e-47 192.2 147 65.3
Rhsim01G0203800 Rhododendron simsii HOM05D004765 ORTHO05D005900 3.7e-47 191.8 138 68.8
Lsat_1_v5_gn_1_77581 Lactuca sativa HOM05D004765 ORTHO05D005900 4.8e-47 191.4 147 65.3
SalBow6G2851 Salvia bowleyana HOM05D004765 ORTHO05D005900 4.8e-47 191.4 149 68.5
Lalb_Chr03g0028231 Lupinus albus HOM05D004765 ORTHO05D005900 8.3e-47 190.7 147 65.3
CDE08G1681 Ceratophyllum demersum HOM05D004765 ORTHO05D005900 1.1e-46 190.3 147 64.6
Sabra04G0134200 Salix brachista HOM05D004765 ORTHO05D005900 1.1e-46 190.3 147 65.3
THA.LOC104814781 Tarenaya hassleriana HOM05D004765 ORTHO05D005900 1.1e-46 190.3 147 63.9
CANSAT54G2137 Cannabis sativa HOM05D004765 ORTHO05D005900 1.4e-46 189.9 147 63.9
HanXRQChr01g0024031 Helianthus annuus HOM05D004765 ORTHO05D005900 1.4e-46 189.9 147 64.6
AUR62020257 Chenopodium quinoa HOM05D004765 ORTHO05D005900 1.8e-46 189.5 147 65.3
SGA_v2.0_scaffold295G47508 Striga asiatica HOM05D004765 ORTHO05D005900 1.8e-46 189.5 147 66.0
CARHR104550 Cardamine hirsuta HOM05D004765 ORTHO05D005900 2.4e-46 189.1 147 66.0
Glyma.11G181400 Glycine max HOM05D004765 ORTHO05D005900 2.4e-46 189.1 147 63.3
PSO801G0028 Papaver somniferum HOM05D004765 ORTHO05D005900 2.4e-46 189.1 146 66.4
EL10Ac7g16329 Beta vulgaris HOM05D004765 ORTHO05D005900 4.1e-46 188.3 147 62.6
MELO3C025589.2 Cucumis melo HOM05D004765 ORTHO05D005900 4.1e-46 188.3 147 65.3
Sp5g16890 Schrenkiella parvula HOM05D004765 ORTHO05D005900 4.1e-46 188.3 147 66.0
CsaV3_1G015080 Cucumis sativus L. HOM05D004765 ORTHO05D005900 5.4e-46 188.0 147 65.3
Gohir.A05G079600 Gossypium hirsutum HOM05D004765 ORTHO05D005900 5.4e-46 188.0 147 63.3
Gorai.009G084100 Gossypium raimondii HOM05D004765 ORTHO05D005900 5.4e-46 188.0 147 63.3
Psat7g187280 Pisum sativum HOM05D004765 ORTHO05D005900 5.4e-46 188.0 144 65.3
AL5G22480 Arabidopsis lyrata HOM05D004765 ORTHO05D005900 1.6e-45 186.4 147 64.6
Gohir.D05G082500 Gossypium hirsutum HOM05D004765 ORTHO05D005900 1.6e-45 186.4 147 62.6
AT3G44330 Arabidopsis thaliana HOM05D004765 ORTHO05D005900 2.0e-45 186.0 147 64.6
ATR0081G060 Amborella trichopoda HOM05D004765 ORTHO05D005900 2.7e-45 185.7 146 62.3
A06p26850 Brassica napus HOM05D004765 ORTHO05D005900 2.7e-45 185.7 147 65.3
Carub.0005s1005 Capsella rubella HOM05D004765 ORTHO05D005900 2.7e-45 185.7 147 64.6
PSO339G1244 Papaver somniferum HOM05D004765 ORTHO05D005900 2.7e-45 185.7 146 64.4
Medtr4g052530 Medicago truncatula HOM05D004765 ORTHO05D005900 4.5e-45 184.9 167 58.7
Aa31LG4G13830 Aethionema arabicum HOM05D004765 ORTHO05D005900 1.0e-44 183.7 147 63.3
Thhalv10010249m.g Eutrema salsugineum HOM05D004765 ORTHO05D005900 1.3e-44 183.3 147 63.3
CAN.G79.6 Capsicum annuum HOM05D004765 ORTHO05D005900 2.3e-44 182.6 115 83.5
BcaB02g10755 Brassica carinata HOM05D004765 ORTHO05D005900 2.9e-44 182.2 147 63.3
FAN21G2648 Fragaria x ananassa HOM05D004765 ORTHO05D005900 2.9e-44 182.2 162 60.5
BcaC01g02231 Brassica carinata HOM05D004765 ORTHO05D005900 5.0e-44 181.4 147 63.3
BcaB01g01169 Brassica carinata HOM05D004765 ORTHO05D005900 8.6e-44 180.6 147 60.5
FAN25G0471 Fragaria x ananassa HOM05D004765 ORTHO05D005900 1.5e-43 179.9 170 58.2
Duzib170G0619 Durio zibethinus HOM05D004765 ORTHO05D005900 2.5e-43 179.1 138 63.0
Aqoxy2G01052 Aquilegia oxysepala HOM05D004765 ORTHO05D005900 7.2e-43 177.6 147 63.3
A06p22050 Brassica napus HOM05D004765 ORTHO05D005900 1.2e-42 176.8 147 61.9
BraA06t25294Z Brassica rapa HOM05D004765 ORTHO05D005900 1.2e-42 176.8 147 61.9
Os08g0102100 Oryza sativa ssp. japonica HOM05D004765 ORTHO05D005900 1.2e-42 176.8 146 60.3
C03p69330 Brassica napus HOM05D004765 ORTHO05D005900 2.1e-42 176.0 147 61.9
BolC3t19191H Brassica oleracea HOM05D004765 ORTHO05D005900 2.1e-42 176.0 147 61.9
HPP92_006357 Vanilla planifolia HOM05D004765 ORTHO05D005900 2.8e-42 175.6 147 58.5
BcaC01g02031 Brassica carinata HOM05D004765 ORTHO05D005900 1.4e-41 173.3 147 60.5
CDE02G4012 Ceratophyllum demersum HOM05D004765 ORTHO05D005900 1.4e-41 173.3 147 61.9
Aqoxy4G02718 Aquilegia oxysepala HOM05D004765 ORTHO05D005900 2.3e-41 172.6 147 60.5
Zm00001eb259900 Zea mays HOM05D004765 ORTHO05D005900 7.5e-40 167.5 146 56.8
unitig_0.g1473 Utricularia gibba HOM05D004765 ORTHO05D005900 8.3e-39 164.1 152 57.2
Zm00001eb198750 Zea mays HOM05D004765 ORTHO05D005900 2.0e-37 159.5 137 56.2
Pp3c12_11630 Physcomitrium patens HOM05D004765 ORTHO05D005900 1.7e-36 156.4 146 51.4
Mapoly0185s0020 Marchantia polymorpha HOM05D004765 ORTHO05D005900 2.9e-36 155.6 145 50.3
SMO141G0161 Selaginella moellendorffii HOM05D004765 ORTHO05D005900 3.4e-32 142.1 152 48.0
Migut.D02363 Erythranthe guttata HOM05D004765 ORTHO05D005900 2.2e-31 139.4 103 69.9
SEGI_20304 Sequoiadendron giganteum HOM05D004765 ORTHO05D005900 7.0e-30 134.4 98 66.3
FvH4_3g25670 Fragaria vesca HOM05D004765 ORTHO05D005900 2.3e-28 129.4 104 64.4
CBR_g17963 Chara braunii HOM05D004765 ORTHO05D005900 8.6e-28 127.5 146 44.5
AagrBONN_evm.TU.Sc2ySwM_368.2350 Anthoceros agrestis HOM05D004765 ORTHO05D005900 2.9e-23 112.5 146 38.4
TAR633G0557 Trochodendron aralioides HOM05D004765 ORTHO05D005900 1.4e-09 67.0 43 72.1
Os12g0509400 Oryza sativa ssp. japonica HOM05D004765 ORTHO05D296799 9.9e-08 60.8 53 58.5
AUR62001526 Chenopodium quinoa HOM05D004765 ORTHO05D005900 8.4e-07 57.8 48 60.4


User provided reference genes

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