Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1209.34 Capsicum annuum HOM05D006618 ORTHO05D008291 5.7e-93 344.4 189 100.0
Sopen06g035880 Solanum pennellii HOM05D006618 ORTHO05D008291 4.4e-53 211.8 171 73.7
Solyc06g084500.3 Solanum lycopersicum HOM05D006618 ORTHO05D008291 1.9e-51 206.5 187 67.9
Peaxi162Scf01039g00026 Petunia axillaris HOM05D006618 ORTHO05D008291 5.4e-51 204.9 178 69.7
PGSC0003DMG400024043 Solanum tuberosum HOM05D006618 ORTHO05D008291 9.2e-51 204.1 186 68.8
Nitab4.5_0012299g0010 Nicotiana tabacum HOM05D006618 ORTHO05D008291 5.6e-48 194.9 184 65.8
Nitab4.5_0002093g0230 Nicotiana tabacum HOM05D006618 ORTHO05D008291 9.9e-45 184.1 184 63.0
MSTRG.18188 Avicennia marina HOM05D006618 ORTHO05D008291 3.0e-41 172.6 173 60.1
Hund18083 Selenicereus undatus HOM05D006618 ORTHO05D008291 4.3e-40 168.7 180 55.6
Sc17g0003540 Simmondsia chinensis HOM05D006618 ORTHO05D008291 6.9e-38 161.4 174 54.0
Hma1.2p1_0399F.1_g144140 Hydrangea macrophylla HOM05D006618 ORTHO05D008291 9.0e-38 161.0 176 56.2
Aqoxy5G00606 Aquilegia oxysepala HOM05D006618 ORTHO05D008291 5.8e-37 158.3 189 51.3
CSS0038517 Camellia sinensis var. sinensis HOM05D006618 ORTHO05D008291 4.9e-36 155.2 193 51.8
Phvul.001G202800 Phaseolus vulgaris HOM05D006618 ORTHO05D008291 5.4e-35 151.8 184 49.5
Glyma.03G209500 Glycine max HOM05D006618 ORTHO05D008291 7.1e-35 151.4 190 51.1
VMungo1383G0445 Vigna mungo HOM05D006618 ORTHO05D008291 7.1e-35 151.4 181 50.3
Cc01_g20320 Coffea canephora HOM05D006618 ORTHO05D008291 2.1e-34 149.8 161 57.1
Dinv33000 Davidia involucrata HOM05D006618 ORTHO05D008291 2.7e-34 149.4 177 52.0
EL10Ac7g17390 Beta vulgaris HOM05D006618 ORTHO05D008291 1.3e-33 147.1 169 51.5
Thhalv10028994m.g Eutrema salsugineum HOM05D006618 ORTHO05D008291 1.3e-33 147.1 174 51.7
Duzib138G1186 Durio zibethinus HOM05D006618 ORTHO05D008291 3.0e-33 146.0 169 55.0
PGR119G1443 Punica granatum HOM05D006618 ORTHO05D008291 3.0e-33 146.0 178 51.1
Carub.0006s3388 Capsella rubella HOM05D006618 ORTHO05D008291 3.9e-33 145.6 179 49.2
CiPaw.08G099900 Carya illinoinensis HOM05D006618 ORTHO05D008291 6.6e-33 144.8 177 50.8
AUR62036645 Chenopodium quinoa HOM05D006618 ORTHO05D008291 6.6e-33 144.8 175 53.1
PSO170G6580 Papaver somniferum HOM05D006618 ORTHO05D008291 8.7e-33 144.4 182 50.5
THA.LOC104801197 Tarenaya hassleriana HOM05D006618 ORTHO05D008291 8.7e-33 144.4 180 50.6
vmacro02504 Vaccinium macrocarpon HOM05D006618 ORTHO05D008291 8.7e-33 144.4 207 45.9
Potri.014G134700 Populus trichocarpa HOM05D006618 ORTHO05D008291 1.1e-32 144.1 180 51.1
Duzib211G0091 Durio zibethinus HOM05D006618 ORTHO05D008291 1.5e-32 143.7 168 53.0
Aa31LG5G2680 Aethionema arabicum HOM05D006618 ORTHO05D008291 1.9e-32 143.3 176 50.6
Ah.08g212660 Amaranthus hybridus HOM05D006618 ORTHO05D008291 2.5e-32 142.9 186 47.3
Manes.05G067500 Manihot esculenta HOM05D006618 ORTHO05D008291 2.5e-32 142.9 179 54.2
Atru.chr5.1237 Acer truncatum HOM05D006618 ORTHO05D008291 4.3e-32 142.1 180 52.8
PSO210G2131 Papaver somniferum HOM05D006618 ORTHO05D008291 4.3e-32 142.1 182 50.0
Sp6g03210 Schrenkiella parvula HOM05D006618 ORTHO05D008291 4.3e-32 142.1 171 49.1
Glyma.19G206900 Glycine max HOM05D006618 ORTHO05D008291 5.6e-32 141.7 176 50.0
C03p37140 Brassica napus HOM05D006618 ORTHO05D008291 7.3e-32 141.4 188 47.3
Gorai.007G131200 Gossypium raimondii HOM05D006618 ORTHO05D008291 7.3e-32 141.4 151 52.3
Lj1C37G5 Lonicera japonica HOM05D000143 ORTHO05D000072 7.3e-32 141.4 156 53.2
SGA_v2.0_scaffold11G05756 Striga asiatica HOM05D006618 ORTHO05D008291 1.6e-31 140.2 194 47.4
BcaC01g06702 Brassica carinata HOM05D006618 ORTHO05D008291 4.8e-31 138.7 188 46.8
QL12p024238 Quercus lobata HOM05D006618 ORTHO05D008291 6.2e-31 138.3 160 51.9
AT4G03180 Arabidopsis thaliana HOM05D006618 ORTHO05D008291 8.1e-31 137.9 175 47.4
Lsat_1_v5_gn_9_4841 Lactuca sativa HOM05D006618 ORTHO05D008291 8.1e-31 137.9 192 46.9
BolC3t16012H Brassica oleracea HOM05D006618 ORTHO05D008291 1.4e-30 137.1 189 45.0
COL.COLO4_08018 Corchorus olitorius HOM05D006618 ORTHO05D008291 1.8e-30 136.7 167 50.3
ECA247G1808 Erigeron canadensis HOM05D006618 ORTHO05D008291 3.1e-30 136.0 184 49.5
AL6G49760 Arabidopsis lyrata HOM05D006618 ORTHO05D008291 4.0e-30 135.6 173 46.2
Nn3g21320 Nelumbo nucifera HOM05D006618 ORTHO05D008291 4.0e-30 135.6 150 52.7
Lj1g0015584 Lotus japonicus HOM05D006618 ORTHO05D008291 1.2e-29 134.0 191 45.0
FvH4_2g24850 Fragaria vesca HOM05D006618 ORTHO05D008291 2.0e-29 133.3 179 50.3
FAN24G2031 Fragaria x ananassa HOM05D006618 ORTHO05D008291 2.0e-29 133.3 179 50.3
Sed0009421 Sechium edule HOM05D006618 ORTHO05D008291 2.0e-29 133.3 174 48.9
MD11G1299100 Malus domestica HOM05D006618 ORTHO05D008291 3.4e-29 132.5 216 43.1
Zm00001eb410530 Zea mays HOM05D006618 ORTHO05D008291 3.4e-29 132.5 147 53.7
Prupe.8G253400 Prunus persica HOM05D006618 ORTHO05D008291 5.8e-29 131.7 204 45.1
FAN27G1167 Fragaria x ananassa HOM05D006618 ORTHO05D008291 7.6e-29 131.3 178 48.9
Sed0008392 Sechium edule HOM05D006618 ORTHO05D008291 7.6e-29 131.3 175 48.0
Zm00001eb137700 Zea mays HOM05D006618 ORTHO05D008291 7.6e-29 131.3 143 53.1
Oeu057561.4 Olea europaea HOM05D006618 ORTHO05D008008 9.9e-29 131.0 154 55.2
MD03G1276600 Malus domestica HOM05D006618 ORTHO05D008291 2.2e-28 129.8 218 44.5
Medtr7g108100 Medicago truncatula HOM05D006618 ORTHO05D008291 2.2e-28 129.8 175 47.4
BcaB05g23692 Brassica carinata HOM05D006618 ORTHO05D008291 2.9e-28 129.4 178 44.9
CARHR251610 Cardamine hirsuta HOM05D006618 ORTHO05D008291 3.8e-28 129.0 168 45.2
Eucgr.H01207 Eucalyptus grandis HOM05D006618 ORTHO05D008291 3.8e-28 129.0 165 50.9
SalBow3G3170 Salvia bowleyana HOM05D006618 ORTHO05D008291 6.4e-28 128.3 196 45.9
TAR362G0318 Trochodendron aralioides HOM05D006618 ORTHO05D008291 6.4e-28 128.3 178 46.1
Cfa006056 Carpinus fangiana HOM05D006618 ORTHO05D008291 8.4e-28 127.9 183 46.4
AUR62034630 Chenopodium quinoa HOM05D006618 ORTHO05D008291 5.4e-27 125.2 204 44.1
Gohir.A11G117500 Gossypium hirsutum HOM05D006618 ORTHO05D008291 7.1e-27 124.8 191 42.9
Ca_23188_v3 Cicer arietinum L. HOM05D006618 ORTHO05D008291 1.2e-26 124.0 173 48.0
Sabra14G0100400 Salix brachista HOM05D006618 ORTHO05D008291 2.1e-26 123.2 173 48.6
HanXRQChr15g0466141 Helianthus annuus HOM05D006618 ORTHO05D008291 3.5e-26 122.5 169 49.1
Lalb_Chr18g0047451 Lupinus albus HOM05D006618 ORTHO05D008291 4.6e-26 122.1 166 48.2
RcHm_v2.0_Chr6g0292701 Rosa chinensis HOM05D006618 ORTHO05D008291 6.0e-26 121.7 179 45.8
Haze_04826 Corylus avellana HOM05D006618 ORTHO05D008291 7.9e-26 121.3 224 40.2
TWI12G0445 Tripterygium wilfordii HOM05D006618 ORTHO05D008291 7.9e-26 121.3 188 44.1
Os12g0538100 Oryza sativa ssp. japonica HOM05D006618 ORTHO05D008291 1.0e-25 120.9 154 50.6
Psat3g024440 Pisum sativum HOM05D006618 ORTHO05D008291 1.0e-25 120.9 195 45.1
Haze_04795 Corylus avellana HOM05D006618 ORTHO05D008291 1.8e-25 120.2 225 40.0
FAN15G0256 Fragaria x ananassa HOM05D006618 ORTHO05D008291 2.3e-25 119.8 175 44.6
ClCG09G006430 Citrullus lanatus HOM05D006618 ORTHO05D008291 3.0e-25 119.4 180 45.0
Ciclev10022357m.g Citrus clementina HOM05D006618 ORTHO05D008291 5.1e-25 118.6 173 46.2
TPR.G32314 Trifolium pratense HOM05D006618 ORTHO05D008291 5.1e-25 118.6 207 42.5
BcaC03g16213 Brassica carinata HOM05D006618 ORTHO05D008291 6.7e-25 118.2 176 42.0
BolC2t10017H Brassica oleracea HOM05D006618 ORTHO05D008291 6.7e-25 118.2 176 42.0
CsaV3_7G028720 Cucumis sativus L. HOM05D006618 ORTHO05D008291 6.7e-25 118.2 188 43.6
ATR0706G074 Amborella trichopoda HOM05D006618 ORTHO05D008291 4.3e-24 115.5 175 45.1
Rhsim13G0016600 Rhododendron simsii HOM05D006618 ORTHO05D008291 7.4e-24 114.8 156 45.5
MELO3C015900.2 Cucumis melo HOM05D006618 ORTHO05D008291 2.1e-23 113.2 190 43.7
A02p25130 Brassica napus HOM05D006618 ORTHO05D008291 4.8e-23 112.1 176 40.9
BcaB01g02511 Brassica carinata HOM05D006618 ORTHO05D008291 1.1e-22 110.9 183 42.1
C02p39890 Brassica napus HOM05D006618 ORTHO05D008291 1.8e-22 110.2 176 40.9
BraA02t07501Z Brassica rapa HOM05D006618 ORTHO05D008291 3.1e-22 109.4 176 40.3
Migut.D00152 Erythranthe guttata HOM05D006618 ORTHO05D008291 5.3e-22 108.6 202 42.1
unitig_22.g5246 Utricularia gibba HOM05D006618 ORTHO05D008291 5.3e-22 108.6 167 46.1
Thecc.01G291700 Theobroma cacao HOM05D006618 ORTHO05D008291 4.5e-21 105.5 184 41.8
GSVIVG01010994001 Vitis vinifera HOM05D006618 ORTHO05D008291 4.5e-21 105.5 124 50.8
HPP92_017865 Vanilla planifolia HOM05D006618 ORTHO05D008291 1.1e-19 100.9 184 43.5
arahy.Tifrunner.gnm1.ann1.1H6IZY Arachis hypogaea HOM05D006618 ORTHO05D008291 2.7e-18 96.3 149 43.0
CANSAT25G1401 Cannabis sativa HOM05D006618 ORTHO05D008291 2.7e-18 96.3 190 43.7
MBI19_g13630_MAGBIO Magnolia biondii HOM05D006618 ORTHO05D008291 7.9e-18 94.7 154 43.5
arahy.Tifrunner.gnm1.ann1.160DKY Arachis hypogaea HOM05D006618 ORTHO05D008291 3.3e-16 89.4 147 42.2
FAN20G2846 Fragaria x ananassa HOM05D006618 ORTHO05D008291 4.3e-16 89.0 156 44.2
Ca_09115_v3 Cicer arietinum L. HOM05D006618 ORTHO05D008291 4.8e-15 85.5 152 41.4
Gohir.D11G122400 Gossypium hirsutum HOM05D006618 ORTHO05D008291 9.0e-14 81.3 125 44.0
Atru.chr5.1270 Acer truncatum HOM05D006618 ORTHO05D008291 2.2e-12 76.6 116 47.4
Actinidia24851 Actinidia chinensis HOM05D006618 ORTHO05D008291 2.2e-12 76.6 108 41.7
Actinidia21075 Actinidia chinensis HOM05D006618 ORTHO05D008291 3.8e-12 75.9 49 73.5
BcaB05g22921 Brassica carinata HOM05D001082 ORTHO05D008291 2.5e-11 73.2 135 39.3
THA.LOC104827373 Tarenaya hassleriana HOM05D006618 ORTHO05D008291 5.5e-11 72.0 123 40.7
Cfa006024 Carpinus fangiana HOM05D006618 ORTHO05D008291 9.3e-11 71.2 70 55.7
arahy.Tifrunner.gnm1.ann1.MTA467 Arachis hypogaea HOM05D006618 ORTHO05D008291 1.2e-10 70.9 148 35.1
arahy.Tifrunner.gnm1.ann1.915FC2 Arachis hypogaea HOM05D006618 ORTHO05D008291 2.3e-09 66.6 145 33.1
Mapoly0001s0215 Marchantia polymorpha HOM05D006618 ORTHO05D008291 8.7e-09 64.7 214 36.9
SHI15557 Sapria himalayana HOM05D006618 ORTHO05D008291 3.3e-08 62.8 64 54.7
SEGI_31360 Sequoiadendron giganteum HOM05D006618 ORTHO05D008291 5.7e-08 62.0 87 48.3
AagrBONN_evm.TU.Sc2ySwM_117.1999 Anthoceros agrestis HOM05D006618 ORTHO05D008291 2.2e-07 60.1 87 47.1


User provided reference genes

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