Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1209.25 Capsicum annuum HOM05D007613 ORTHO05D009344 8.8e-69 263.5 130 100.0
Sopen06g035930 Solanum pennellii HOM05D007613 ORTHO05D009344 6.8e-61 237.3 129 89.1
Nitab4.5_0019054g0010 Nicotiana tabacum HOM05D007613 ORTHO05D009344 5.7e-60 234.2 129 87.6
Solyc06g084550.3 Solanum lycopersicum HOM05D007613 ORTHO05D009344 1.3e-59 233.0 129 86.8
Nitab4.5_0002820g0060 Nicotiana tabacum HOM05D007613 ORTHO05D009344 2.2e-59 232.3 129 86.0
Peaxi162Scf00140g01222 Petunia axillaris HOM05D007613 ORTHO05D009344 1.4e-58 229.6 129 86.0
Oeu048336.2 Olea europaea HOM05D007613 ORTHO05D009344 1.2e-46 189.9 128 70.3
vmacro15014 Vaccinium macrocarpon HOM05D007613 ORTHO05D009344 6.4e-43 177.6 133 63.2
Actinidia24821 Actinidia chinensis HOM05D007613 ORTHO05D009344 2.4e-42 175.6 128 63.3
Cc01_g20860 Coffea canephora HOM05D007613 ORTHO05D009344 9.2e-42 173.7 127 63.0
PGSC0003DMG400024046 Solanum tuberosum HOM05D007613 ORTHO05D009344 9.2e-42 173.7 152 63.2
MSTRG.18147 Avicennia marina HOM05D007613 ORTHO05D009344 8.6e-40 167.2 128 62.5
Migut.D00222 Erythranthe guttata HOM05D007613 ORTHO05D009344 4.3e-39 164.9 125 64.8
ECA248G1192 Erigeron canadensis HOM05D007613 ORTHO05D009344 9.5e-39 163.7 127 60.6
Hma1.2p1_0491F.1_g164570 Hydrangea macrophylla HOM05D007613 ORTHO05D009344 2.3e-37 159.1 129 60.5
Lsat_1_v5_gn_5_191040 Lactuca sativa HOM05D007613 ORTHO05D009344 3.1e-37 158.7 127 58.3
Potri.014G128900 Populus trichocarpa HOM05D007613 ORTHO05D009344 4.0e-37 158.3 128 57.8
QL12p028448 Quercus lobata HOM05D007613 ORTHO05D009344 3.4e-36 155.2 128 57.0
HanXRQChr13g0413041 Helianthus annuus HOM05D007613 ORTHO05D009344 9.8e-36 153.7 121 58.7
CiPaw.07G109200 Carya illinoinensis HOM05D007613 ORTHO05D009344 1.3e-35 153.3 128 57.0
Ciclev10022836m.g Citrus clementina HOM05D007613 ORTHO05D009344 2.2e-35 152.5 128 55.5
Eucgr.H01109 Eucalyptus grandis HOM05D007613 ORTHO05D009344 3.7e-35 151.8 128 56.2
DCAR_018332 Daucus carota HOM05D007613 ORTHO05D009344 6.4e-35 151.0 125 55.2
Manes.01G219200 Manihot esculenta HOM05D007613 ORTHO05D009344 8.3e-35 150.6 128 55.5
VMungo0720G1265 Vigna mungo HOM05D007613 ORTHO05D009344 8.3e-35 150.6 128 56.2
TPR.G33996 Trifolium pratense HOM05D007613 ORTHO05D009344 1.4e-34 149.8 128 57.0
arahy.Tifrunner.gnm1.ann1.BW40YJ Arachis hypogaea HOM05D007613 ORTHO05D009344 3.2e-34 148.7 128 53.1
Phvul.007G146700 Phaseolus vulgaris HOM05D007613 ORTHO05D009344 5.4e-34 147.9 128 53.9
TAR636G2501 Trochodendron aralioides HOM05D007613 ORTHO05D009344 7.0e-34 147.5 128 55.5
arahy.Tifrunner.gnm1.ann1.7MAL8N Arachis hypogaea HOM05D007613 ORTHO05D009344 1.2e-33 146.7 128 52.3
Psat6g165400 Pisum sativum HOM05D007613 ORTHO05D009344 1.2e-33 146.7 128 55.5
PGR119G2478 Punica granatum HOM05D007613 ORTHO05D009344 1.6e-33 146.4 125 56.0
AT3G62880 Arabidopsis thaliana HOM05D007613 ORTHO05D009344 1.3e-32 143.3 128 51.6
AL5G45650 Arabidopsis lyrata HOM05D007613 ORTHO05D009344 1.7e-32 142.9 128 51.6
Cpa.g.sc9.260 Carica papaya HOM05D000286 ORTHO05D000170 2.3e-32 142.5 116 56.0
Gohir.D12G134100 Gossypium hirsutum HOM05D007613 ORTHO05D009344 2.3e-32 142.5 125 55.2
GSVIVG01028017001 Vitis vinifera HOM05D007613 ORTHO05D009344 2.3e-32 142.5 125 54.4
Thhalv10006304m.g Eutrema salsugineum HOM05D007613 ORTHO05D009344 3.0e-32 142.1 128 52.3
CDE08G0198 Ceratophyllum demersum HOM05D007613 ORTHO05D009344 5.1e-32 141.4 128 53.1
Duzib133G0913 Durio zibethinus HOM05D007613 ORTHO05D009344 5.1e-32 141.4 128 53.9
Gorai.008G145100 Gossypium raimondii HOM05D007613 ORTHO05D009344 6.6e-32 141.0 125 54.4
Lj5g0017580 Lotus japonicus HOM05D007613 ORTHO05D009344 8.6e-32 140.6 130 53.1
Thecc.01G300700 Theobroma cacao HOM05D007613 ORTHO05D009344 1.5e-31 139.8 109 58.7
MELO3C016000.2 Cucumis melo HOM05D007613 ORTHO05D009344 1.9e-31 139.4 128 51.6
CARHR173140 Cardamine hirsuta HOM05D007613 ORTHO05D009344 2.5e-31 139.0 117 53.8
Migut.B01150 Erythranthe guttata HOM05D007613 ORTHO05D009344 2.5e-31 139.0 107 63.6
Sp5g00640 Schrenkiella parvula HOM05D007613 ORTHO05D009344 4.3e-31 138.3 117 53.8
Aa31LG10G16510 Aethionema arabicum HOM05D007613 ORTHO05D009344 5.6e-31 137.9 128 50.0
Medtr1g088460 Medicago truncatula HOM05D007613 ORTHO05D009344 5.6e-31 137.9 128 54.7
BraA04t15767Z Brassica rapa HOM05D007613 ORTHO05D009344 1.6e-30 136.3 128 50.8
CsaV3_7G029280 Cucumis sativus L. HOM05D007613 ORTHO05D009344 1.6e-30 136.3 128 50.0
EL10Ac7g17473 Beta vulgaris HOM05D007613 ORTHO05D009344 2.1e-30 136.0 128 51.6
Lalb_Chr06g0166471 Lupinus albus HOM05D007613 ORTHO05D009344 2.1e-30 136.0 122 51.6
BcaB02g08092 Brassica carinata HOM05D007613 ORTHO05D009344 8.1e-30 134.0 128 50.0
Atru.chr5.1146 Acer truncatum HOM05D007613 ORTHO05D009344 1.1e-29 133.7 125 52.8
Glyma.10G018300 Glycine max HOM05D007613 ORTHO05D009344 5.2e-29 131.3 130 50.8
THA.LOC104798831 Tarenaya hassleriana HOM05D007613 ORTHO05D009344 5.2e-29 131.3 128 50.8
Ca_10334_v3 Cicer arietinum L. HOM05D007613 ORTHO05D009344 6.8e-29 131.0 128 52.3
Prupe.8G261600 Prunus persica HOM05D007613 ORTHO05D009344 1.5e-28 129.8 128 50.0
RcHm_v2.0_Chr6g0294031 Rosa chinensis HOM05D007613 ORTHO05D009344 1.5e-28 129.8 128 52.3
MD03G1288400 Malus domestica HOM05D007613 ORTHO05D009344 2.0e-28 129.4 128 50.8
C04p30380 Brassica napus HOM05D007613 ORTHO05D009344 4.4e-28 128.3 128 49.2
BolC4t24569H Brassica oleracea HOM05D007613 ORTHO05D009344 4.4e-28 128.3 128 49.2
Ah.08g213430 Amaranthus hybridus HOM05D000286 ORTHO05D000170 1.3e-27 126.7 120 48.3
CSS0026666 Camellia sinensis var. sinensis HOM05D007613 ORTHO05D009344 2.1e-25 119.4 87 63.2
TWI59G0030 Tripterygium wilfordii HOM05D007613 ORTHO05D009344 3.5e-25 118.6 125 47.2
PSO170G2016 Papaver somniferum HOM05D007613 ORTHO05D009344 4.6e-25 118.2 127 46.5
FvH4_2g25740 Fragaria vesca HOM05D007613 ORTHO05D009344 2.3e-24 115.9 119 46.2
Lalb_Chr02g0146351 Lupinus albus HOM05D007613 ORTHO05D009344 2.3e-24 115.9 125 44.0
Nn3g21498 Nelumbo nucifera HOM05D007613 ORTHO05D009344 3.9e-24 115.2 89 56.2
A04p00480 Brassica napus HOM05D007613 ORTHO05D009344 1.2e-22 110.2 104 48.1
COL.COLO4_23344 Corchorus olitorius HOM05D007613 ORTHO05D009344 2.1e-22 109.4 90 52.2
ATR0706G141 Amborella trichopoda HOM05D007613 ORTHO05D009344 6.2e-22 107.8 123 40.7
Sed0015913 Sechium edule HOM05D007613 ORTHO05D009344 3.1e-21 105.5 97 48.5
Aqoxy2G02939 Aquilegia oxysepala HOM05D007613 ORTHO05D009344 5.2e-21 104.8 95 47.4
Rhsim01G0285300 Rhododendron simsii HOM05D007613 ORTHO05D009344 8.9e-21 104.0 99 51.5
Haze_04939 Corylus avellana HOM05D007613 ORTHO05D009344 1.5e-20 103.2 105 47.6
FAN20G1450 Fragaria x ananassa HOM05D007613 ORTHO05D009344 2.2e-19 99.4 139 38.1
SGA_v2.0_scaffold1G00364 Striga asiatica HOM05D001636 ORTHO05D003817 2.9e-19 99.0 72 63.9
ClCG09G005860 Citrullus lanatus HOM05D007613 ORTHO05D009344 1.6e-17 93.2 133 41.4
Sabra14G0095700 Salix brachista HOM05D007613 ORTHO05D009344 3.5e-17 92.0 128 41.4
SMO347G0100 Selaginella moellendorffii HOM05D007613 ORTHO05D009344 6.0e-17 91.3 109 38.5
FAN27G2766 Fragaria x ananassa HOM05D007613 ORTHO05D009344 7.8e-17 90.9 79 50.6
HanXRQChr13g0413071 Helianthus annuus HOM05D007613 ORTHO05D009344 8.7e-16 87.4 70 55.7
Actinidia21047 Actinidia chinensis HOM05D007613 ORTHO05D009344 3.1e-13 79.0 55 63.6
SalBow3G3757 Salvia bowleyana HOM05D007613 ORTHO05D009344 1.2e-12 77.0 60 61.7
BcaC02g10319 Brassica carinata HOM05D007613 ORTHO05D009344 1.5e-12 76.6 76 47.4
Pp3c19_22480 Physcomitrium patens HOM05D007613 ORTHO05D009344 3.4e-12 75.5 116 33.6
AUR62008666 Chenopodium quinoa HOM05D007613 ORTHO05D009344 4.4e-12 75.1 76 48.7
Mapoly0048s0107 Marchantia polymorpha HOM05D007613 ORTHO05D009344 9.3e-10 67.4 90 35.6
Gohir.A12G130300 Gossypium hirsutum HOM05D007613 ORTHO05D009344 3.5e-09 65.5 135 33.3
Carub.0005s2952 Capsella rubella HOM05D001675 ORTHO05D001808 7.8e-09 64.3 45 62.2
Hund18170 Selenicereus undatus HOM05D007613 ORTHO05D009344 1.0e-08 63.9 65 44.6
FAN24G3183 Fragaria x ananassa HOM05D007613 ORTHO05D009344 8.7e-08 60.8 64 40.6
MD11G1309700 Malus domestica HOM05D007613 ORTHO05D009344 8.7e-08 60.8 65 46.2
SHI15147 Sapria himalayana HOM05D007613 ORTHO05D009344 5.6e-07 58.2 56 48.2
Cfa005911 Carpinus fangiana HOM05D007613 ORTHO05D009344 1.6e-06 56.6 136 33.1
FAN15G1907 Fragaria x ananassa HOM05D007613 ORTHO05D009344 2.1e-06 56.2 96 31.2


User provided reference genes

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