Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1209.24 Capsicum annuum HOM05D006737 ORTHO05D008418 6.7e-187 657.1 320 100.0
Sopen06g035940 Solanum pennellii HOM05D006737 ORTHO05D008418 1.7e-142 509.6 300 83.7
Solyc06g084570.4 Solanum lycopersicum HOM05D006737 ORTHO05D008418 9.5e-141 503.8 304 82.9
Nitab4.5_0004367g0110 Nicotiana tabacum HOM05D006737 ORTHO05D008418 2.1e-132 476.1 363 69.1
Peaxi162Scf00140g01213 Petunia axillaris HOM05D006737 ORTHO05D008418 6.2e-124 448.0 259 83.4
GSVIVG01028025001 Vitis vinifera HOM05D006737 ORTHO05D008418 6.0e-103 378.3 283 65.4
Prupe.8G262100 Prunus persica HOM05D006737 ORTHO05D008418 2.8e-100 369.4 300 60.7
MD03G1288800 Malus domestica HOM05D006737 ORTHO05D008418 2.9e-97 359.4 305 58.4
Ciclev10021225m.g Citrus clementina HOM05D006737 ORTHO05D008418 3.8e-97 359.0 298 57.0
Atru.chr5.1140 Acer truncatum HOM05D006737 ORTHO05D008418 8.5e-97 357.8 280 61.1
Cpa.g.sc9.256 Carica papaya HOM05D006737 ORTHO05D008418 1.9e-96 356.7 288 60.8
vmacro02447 Vaccinium macrocarpon HOM05D006737 ORTHO05D008418 1.9e-96 356.7 288 62.8
Haze_04944 Corylus avellana HOM05D006737 ORTHO05D008418 2.5e-96 356.3 299 57.2
Cfa005906 Carpinus fangiana HOM05D006737 ORTHO05D008418 5.5e-96 355.1 301 57.8
MD11G1309100 Malus domestica HOM05D006737 ORTHO05D008418 5.5e-96 355.1 291 60.5
CSS0030900 Camellia sinensis var. sinensis HOM05D006737 ORTHO05D008418 7.2e-96 354.8 292 61.6
FvH4_2g25800 Fragaria vesca HOM05D006737 ORTHO05D008418 1.2e-95 354.0 306 57.2
TWI14G0449 Tripterygium wilfordii HOM05D006737 ORTHO05D008418 1.2e-95 354.0 292 59.2
FAN15G3576 Fragaria x ananassa HOM05D006737 ORTHO05D008418 3.6e-95 352.4 306 57.2
FAN24G1027 Fragaria x ananassa HOM05D006737 ORTHO05D008418 3.6e-95 352.4 306 56.9
Manes.01G219800 Manihot esculenta HOM05D006737 ORTHO05D008418 3.6e-95 352.4 304 57.2
TAR365G0544 Trochodendron aralioides HOM05D006737 ORTHO05D008418 3.6e-95 352.4 289 60.2
Potri.002G203900 Populus trichocarpa HOM05D006737 ORTHO05D008418 7.9e-95 351.3 282 59.6
ECA236G1530 Erigeron canadensis HOM05D006737 ORTHO05D008418 1.0e-94 350.9 284 58.1
RcHm_v2.0_Chr6g0294111 Rosa chinensis HOM05D006737 ORTHO05D008418 6.7e-94 348.2 303 55.8
Eucgr.H01107 Eucalyptus grandis HOM05D006737 ORTHO05D008418 3.3e-93 345.9 291 58.4
Lsat_1_v5_gn_8_164261 Lactuca sativa HOM05D006737 ORTHO05D008418 3.3e-93 345.9 288 55.9
Glyma.19G211400 Glycine max HOM05D006737 ORTHO05D008418 5.7e-93 345.1 282 58.9
Nn3g21504 Nelumbo nucifera HOM05D006737 ORTHO05D008418 7.4e-93 344.7 288 58.7
AUR62025575 Chenopodium quinoa HOM05D006737 ORTHO05D008418 9.7e-93 344.4 293 55.6
MSTRG.12607 Avicennia marina HOM05D006737 ORTHO05D008418 2.2e-92 343.2 301 55.5
Phvul.001G207600 Phaseolus vulgaris HOM05D006737 ORTHO05D008418 2.2e-92 343.2 287 58.9
FAN27G1696 Fragaria x ananassa HOM05D006737 ORTHO05D008418 2.8e-92 342.8 319 54.5
AUR62008669 Chenopodium quinoa HOM05D006737 ORTHO05D008418 6.3e-92 341.7 293 55.3
EL10Ac7g17513 Beta vulgaris HOM05D006737 ORTHO05D008418 1.4e-91 340.5 293 55.3
Gohir.A12G130100 Gossypium hirsutum HOM05D006737 ORTHO05D008418 2.4e-91 339.7 283 58.0
Lj6g0001904 Lotus japonicus HOM05D006737 ORTHO05D008418 3.1e-91 339.3 282 57.1
Gorai.008G144900 Gossypium raimondii HOM05D006737 ORTHO05D008418 5.3e-91 338.6 283 57.6
Gohir.D12G133900 Gossypium hirsutum HOM05D006737 ORTHO05D008418 2.6e-90 336.3 283 57.2
MBI19_g26092_MAGBIO Magnolia biondii HOM05D006737 ORTHO05D008418 2.2e-89 333.2 284 56.7
Sabra02G0155300 Salix brachista HOM05D006737 ORTHO05D008418 2.5e-88 329.7 324 52.5
PSO407G0435 Papaver somniferum HOM05D006737 ORTHO05D008418 3.2e-88 329.3 290 55.5
Thecc.01G301300 Theobroma cacao HOM05D006737 ORTHO05D008418 4.2e-88 328.9 317 51.7
SalBow2G2271 Salvia bowleyana HOM05D006737 ORTHO05D008418 5.5e-88 328.6 259 59.1
QL12p028401 Quercus lobata HOM05D006737 ORTHO05D008418 2.7e-87 326.2 282 55.3
BcaB01g02446 Brassica carinata HOM05D006737 ORTHO05D008418 4.6e-87 325.5 292 55.1
CiPaw.07G109800 Carya illinoinensis HOM05D006737 ORTHO05D008418 4.6e-87 325.5 336 50.6
Migut.N01508 Erythranthe guttata HOM05D006737 ORTHO05D008418 6.1e-87 325.1 276 59.4
PSO170G1161 Papaver somniferum HOM05D006737 ORTHO05D008418 6.1e-87 325.1 290 55.2
Hund05430 Selenicereus undatus HOM05D006737 ORTHO05D008418 6.1e-87 325.1 293 54.3
FAN20G1602 Fragaria x ananassa HOM05D006737 ORTHO05D008418 7.9e-87 324.7 301 54.5
Gohir.D08G085900 Gossypium hirsutum HOM05D006737 ORTHO05D008418 1.0e-86 324.3 280 56.1
CiPaw.07G109600 Carya illinoinensis HOM05D006737 ORTHO05D008418 1.4e-86 323.9 259 61.0
Migut.O00484 Erythranthe guttata HOM05D006737 ORTHO05D008418 1.4e-86 323.9 299 56.2
Cc01_g20900 Coffea canephora HOM05D006737 ORTHO05D008418 3.0e-86 322.8 284 57.0
Gohir.A08G076400 Gossypium hirsutum HOM05D006737 ORTHO05D008418 3.0e-86 322.8 280 55.7
Gorai.004G090400 Gossypium raimondii HOM05D006737 ORTHO05D008418 5.1e-86 322.0 280 55.7
AL6G50710 Arabidopsis lyrata HOM05D006737 ORTHO05D008418 1.1e-85 320.9 282 56.0
Oeu048335.1 Olea europaea HOM05D006737 ORTHO05D008418 1.1e-85 320.9 236 64.4
Rhsim13G0009900 Rhododendron simsii HOM05D006737 ORTHO05D008418 2.0e-85 320.1 292 56.5
BcaC01g06761 Brassica carinata HOM05D006737 ORTHO05D008418 2.6e-85 319.7 284 56.0
Carub.0006s3475 Capsella rubella HOM05D006737 ORTHO05D008418 2.6e-85 319.7 282 56.0
VMungo1383G2597 Vigna mungo HOM05D006737 ORTHO05D008418 2.6e-85 319.7 259 59.5
CANSAT25G2451 Cannabis sativa HOM05D006737 ORTHO05D008418 4.8e-84 315.5 286 54.9
Hma1.2p1_0491F.1_g164620 Hydrangea macrophylla HOM05D006737 ORTHO05D008418 4.8e-84 315.5 259 57.9
Aqoxy2G02933 Aquilegia oxysepala HOM05D006737 ORTHO05D008418 1.1e-83 314.3 295 53.9
Migut.J01135 Erythranthe guttata HOM05D006737 ORTHO05D008418 1.1e-83 314.3 286 56.3
DCAR_002840 Daucus carota HOM05D006737 ORTHO05D008418 1.8e-83 313.5 292 56.2
Thhalv10028823m.g Eutrema salsugineum HOM05D006737 ORTHO05D008418 1.8e-83 313.5 283 55.1
C03p37890 Brassica napus HOM05D006737 ORTHO05D008418 3.1e-83 312.8 304 54.3
A03p31080 Brassica napus HOM05D006737 ORTHO05D008418 5.3e-83 312.0 293 55.3
BraA03t12285Z Brassica rapa HOM05D006737 ORTHO05D008418 5.3e-83 312.0 293 55.3
CARHR250600 Cardamine hirsuta HOM05D006737 ORTHO05D008418 9.1e-83 311.2 300 51.7
Sp6g02290 Schrenkiella parvula HOM05D006737 ORTHO05D008418 9.1e-83 311.2 285 56.5
BolC3t16077H Brassica oleracea HOM05D006737 ORTHO05D008418 1.2e-82 310.8 294 53.7
SGA_v2.0_scaffold198G41142 Striga asiatica HOM05D006737 ORTHO05D008418 1.2e-82 310.8 284 55.3
arahy.Tifrunner.gnm1.ann1.AY1VU4 Arachis hypogaea HOM05D006737 ORTHO05D008418 7.7e-82 308.1 309 50.5
PGR119G0152 Punica granatum HOM05D006737 ORTHO05D008418 1.3e-81 307.4 283 51.6
Actinidia01489 Actinidia chinensis HOM05D006737 ORTHO05D008418 2.2e-81 306.6 233 63.1
ClCG01G014930 Citrullus lanatus HOM05D006737 ORTHO05D008418 5.5e-80 302.0 303 52.1
HanXRQChr04g0114161 Helianthus annuus HOM05D006737 ORTHO05D008418 5.5e-80 302.0 258 55.8
MBI19_g25361_MAGBIO Magnolia biondii HOM05D006737 ORTHO05D008418 2.1e-79 300.1 324 48.8
Aa31LG5G2050 Aethionema arabicum HOM05D006737 ORTHO05D008418 2.3e-78 296.6 285 53.0
CDE01G0235 Ceratophyllum demersum HOM05D006737 ORTHO05D008418 1.5e-77 293.9 291 49.5
Sc05g0003760 Simmondsia chinensis HOM05D006737 ORTHO05D008418 1.5e-77 293.9 290 51.4
MELO3C024580.2 Cucumis melo HOM05D006737 ORTHO05D008418 8.2e-76 288.1 304 50.3
CsaV3_6G041030 Cucumis sativus L. HOM05D006737 ORTHO05D008418 1.8e-75 287.0 284 51.4
arahy.Tifrunner.gnm1.ann1.B4PCIP Arachis hypogaea HOM05D006737 ORTHO05D008418 1.2e-74 284.3 268 52.6
Duzib138G1512 Durio zibethinus HOM05D006737 ORTHO05D008418 1.2e-74 284.3 218 58.7
AT4G02405 Arabidopsis thaliana HOM05D006737 ORTHO05D008418 1.7e-73 280.4 261 54.0
Lalb_Chr02g0146391 Lupinus albus HOM05D006737 ORTHO05D008418 1.7e-73 280.4 262 50.8
COL.COLO4_23338 Corchorus olitorius HOM05D006737 ORTHO05D008418 2.7e-71 273.1 212 60.8
Lj2A1195G25 Lonicera japonica HOM05D006737 ORTHO05D008418 2.9e-65 253.1 271 50.6
Os07g0247100 Oryza sativa ssp. japonica HOM05D006737 ORTHO05D008418 6.5e-65 251.9 291 45.4
Zm00001eb097030 Zea mays HOM05D006737 ORTHO05D008418 1.4e-62 244.2 292 45.5
Nitab4.5_0002820g0110 Nicotiana tabacum HOM05D006737 ORTHO05D008418 1.8e-62 243.8 140 85.7
PGSC0003DMG400024036 Solanum tuberosum HOM05D006737 ORTHO05D008418 1.3e-57 227.6 155 76.1
Sed0017513 Sechium edule HOM05D006737 ORTHO05D008418 1.2e-53 214.5 212 49.1
Oeu010666.1 Olea europaea HOM05D006737 ORTHO05D008418 1.7e-41 174.1 141 56.7
Pp3c24_12380 Physcomitrium patens HOM05D006737 ORTHO05D008418 1.7e-41 174.1 295 38.0
Dinv33057 Davidia involucrata HOM05D006737 ORTHO05D008418 4.3e-40 169.5 124 63.7
VMungo1383G3174 Vigna mungo HOM05D006737 ORTHO05D008418 4.7e-31 139.4 263 34.6
Mapoly0132s0018 Marchantia polymorpha HOM05D006737 ORTHO05D008418 2.0e-29 134.0 240 34.2
arahy.Tifrunner.gnm1.ann1.MB1A81 Arachis hypogaea HOM05D006737 ORTHO05D008418 2.1e-26 124.0 126 50.0
Dinv31287 Davidia involucrata HOM05D006737 ORTHO05D008418 3.1e-22 110.2 89 64.0
Dinv07247 Davidia involucrata HOM05D006737 ORTHO05D008418 8.9e-22 108.6 89 62.9
Dinv17961 Davidia involucrata HOM05D006737 ORTHO05D008418 1.7e-20 104.4 89 61.8
arahy.Tifrunner.gnm1.ann1.MU6BTE Arachis hypogaea HOM05D006737 ORTHO05D008418 1.4e-19 101.3 119 43.7
SEGI_39136 Sequoiadendron giganteum HOM05D006737 ORTHO05D008418 1.2e-18 98.2 138 36.2
BcaB01g02447 Brassica carinata HOM05D006737 ORTHO05D008418 2.0e-13 80.9 116 40.5
BcaB01g02050 Brassica carinata HOM05D006737 ORTHO05D008418 4.9e-12 76.3 104 44.2
Dinv02523 Davidia involucrata HOM05D006737 ORTHO05D008418 1.2e-10 71.6 88 47.7
Dinv32677 Davidia involucrata HOM05D006737 ORTHO05D008418 5.1e-09 66.2 58 56.9
MCO02G241 Micromonas commoda HOM05D006737 ORTHO05D008418 5.1e-09 66.2 124 29.0
Cre09.g387282 Chlamydomonas reinhardtii HOM05D006737 ORTHO05D008418 2.8e-07 60.5 93 37.6
Atru.chr9.1259 Acer truncatum HOM05D000593 ORTHO05D002268 6.2e-07 59.3 38 73.7
Atru.chr3.1390 Acer truncatum HOM05D000593 ORTHO05D000562 1.4e-06 58.2 38 71.1


User provided reference genes

Program Settings