Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1207.10 Capsicum annuum HOM05D003841 ORTHO05D004602 1.5e-84 316.2 168 100.0
PGSC0003DMG400019273 Solanum tuberosum HOM05D003841 ORTHO05D000515 2.4e-26 122.9 261 35.6
Nitab4.5_0000552g0100 Nicotiana tabacum HOM05D003841 ORTHO05D004602 5.0e-24 115.2 267 33.3
Nitab4.5_0003052g0050 Nicotiana tabacum HOM05D003841 ORTHO05D004602 9.4e-23 110.9 258 33.7
CAN.G777.9 Capsicum annuum HOM05D003841 ORTHO05D004602 3.6e-22 109.0 139 49.6
Sopen07g032000 Solanum pennellii HOM05D003841 ORTHO05D004602 4.0e-21 105.5 275 32.4
Solyc07g063870.3 Solanum lycopersicum HOM05D003841 ORTHO05D004602 1.2e-20 104.0 273 32.2
CAN.G22.51 Capsicum annuum HOM05D000121 ORTHO05D000102 9.8e-20 100.9 87 67.8
CAN.G952.3 Capsicum annuum HOM05D003841 ORTHO05D004602 1.7e-19 100.1 55 90.9
Peaxi162Scf01365g00027 Petunia axillaris HOM05D003841 ORTHO05D004602 4.9e-19 98.6 275 31.3
CAN.G1160.11 Capsicum annuum HOM05D003841 ORTHO05D004602 1.6e-17 93.6 56 82.1
CAN.G183.13 Capsicum annuum HOM05D003841 ORTHO05D004602 1.0e-16 90.9 157 40.8
CAN.G935.4 Capsicum annuum HOM05D003841 ORTHO05D004602 3.8e-16 89.0 56 80.4
Oeu052335.1 Olea europaea HOM05D003841 ORTHO05D004602 4.1e-10 68.9 247 27.5
CAN.G362.43 Capsicum annuum HOM05D003841 ORTHO05D004602 5.4e-10 68.6 44 81.8
Cc05_g12980 Coffea canephora HOM05D003841 ORTHO05D004602 5.4e-10 68.6 59 57.6
Dinv02831 Davidia involucrata HOM05D003841 ORTHO05D004602 5.4e-10 68.6 65 58.5
Actinidia05162 Actinidia chinensis HOM05D003841 ORTHO05D004602 9.2e-10 67.8 56 57.1
CAN.G526.7 Capsicum annuum HOM05D009195 ORTHO05D000137 1.2e-09 67.4 45 75.6
CAN.G64.40 Capsicum annuum HOM05D003841 ORTHO05D004602 2.7e-09 66.2 43 76.7
Lj8A163G39 Lonicera japonica HOM05D003841 ORTHO05D004602 5.9e-09 65.1 65 56.9
Actinidia10692 Actinidia chinensis HOM05D003841 ORTHO05D004602 7.8e-09 64.7 56 57.1
Oeu005438.1 Olea europaea HOM05D003841 ORTHO05D004602 7.8e-09 64.7 65 60.0
vmacro09595 Vaccinium macrocarpon HOM05D003841 ORTHO05D004602 7.8e-09 64.7 65 56.9
CANSAT11G1059 Cannabis sativa HOM05D003841 ORTHO05D004602 1.7e-08 63.5 209 27.8
CSS0048456 Camellia sinensis var. sinensis HOM05D003841 ORTHO05D004602 3.0e-08 62.8 65 53.8
SGA_v2.0_scaffold9G05000 Striga asiatica HOM05D003841 ORTHO05D004602 3.9e-08 62.4 64 57.8
Actinidia35303 Actinidia chinensis HOM05D003841 ORTHO05D004602 6.6e-08 61.6 56 57.1
Lj1A861T58 Lonicera japonica HOM05D003841 ORTHO05D004602 6.6e-08 61.6 64 54.7
vmacro11787 Vaccinium macrocarpon HOM05D003841 ORTHO05D004602 1.5e-07 60.5 68 47.1
Manes.15G079400 Manihot esculenta HOM05D003841 ORTHO05D004602 1.9e-07 60.1 62 46.8
PSO541G4862 Papaver somniferum HOM05D003841 ORTHO05D004602 2.5e-07 59.7 86 41.9
Dinv22328 Davidia involucrata HOM05D003841 ORTHO05D004602 4.3e-07 58.9 55 50.9
MSTRG.6876 Avicennia marina HOM05D003841 ORTHO05D004602 5.6e-07 58.5 61 57.4
RhsimUnG0254800 Rhododendron simsii HOM05D003841 ORTHO05D004602 5.6e-07 58.5 55 52.7
FvH4_3g21510 Fragaria vesca HOM05D003841 ORTHO05D004602 9.5e-07 57.8 90 36.7
FAN25G3758 Fragaria x ananassa HOM05D003841 ORTHO05D004602 9.5e-07 57.8 90 36.7
Lsat_1_v5_gn_2_59361 Lactuca sativa HOM05D003841 ORTHO05D004602 9.5e-07 57.8 68 45.6
PSO675G5063 Papaver somniferum HOM05D003841 ORTHO05D004602 9.5e-07 57.8 86 41.9
DCAR_010006 Daucus carota HOM05D003841 ORTHO05D004602 1.2e-06 57.4 58 50.0
DCAR_022502 Daucus carota HOM05D003841 ORTHO05D004602 1.2e-06 57.4 61 57.4
Nn1g06911 Nelumbo nucifera HOM05D003841 ORTHO05D004602 1.2e-06 57.4 58 48.3
Rhsim06G0189000 Rhododendron simsii HOM05D003841 ORTHO05D004602 1.2e-06 57.4 62 46.8
QL08p014515 Quercus lobata HOM05D003841 ORTHO05D004602 1.6e-06 57.0 58 48.3
FAN11G1553 Fragaria x ananassa HOM05D003841 ORTHO05D004602 2.1e-06 56.6 89 39.3
FAN21G0547 Fragaria x ananassa HOM05D003841 ORTHO05D004602 2.8e-06 56.2 83 38.6
HanXRQChr11g0332121 Helianthus annuus HOM05D003841 ORTHO05D004602 2.8e-06 56.2 64 50.0
GSVIVG01014549001 Vitis vinifera HOM05D003841 ORTHO05D004602 2.8e-06 56.2 55 50.9
Migut.H01878 Erythranthe guttata HOM05D003841 ORTHO05D004602 3.6e-06 55.8 150 30.0
FAN16G3040 Fragaria x ananassa HOM05D003841 ORTHO05D004602 4.7e-06 55.5 90 36.7
CSS0046033 Camellia sinensis var. sinensis HOM05D003841 ORTHO05D004602 6.2e-06 55.1 54 50.0
Rhsim06G0190700 Rhododendron simsii HOM05D003841 ORTHO05D004602 6.2e-06 55.1 62 45.2
TWI39G0875 Tripterygium wilfordii HOM05D003841 ORTHO05D004602 6.2e-06 55.1 62 48.4


User provided reference genes

Program Settings