Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1204.2 Capsicum annuum HOM05D004378 ORTHO05D005269 1.1e-198 696.4 353 100.0
Nitab4.5_0000023g0700 Nicotiana tabacum HOM05D004378 ORTHO05D005269 3.6e-173 611.7 361 87.3
PGSC0003DMG400010703 Solanum tuberosum HOM05D004378 ORTHO05D005269 2.0e-171 605.9 362 86.7
Nitab4.5_0002786g0020 Nicotiana tabacum HOM05D004378 ORTHO05D005269 4.4e-171 604.7 375 84.3
Sopen01g003990 Solanum pennellii HOM05D004378 ORTHO05D005269 8.3e-170 600.5 361 86.4
Solyc01g008470.3 Solanum lycopersicum HOM05D004378 ORTHO05D005269 4.1e-169 598.2 361 85.9
Peaxi162Scf00032g00327 Petunia axillaris HOM05D004378 ORTHO05D005269 6.5e-167 590.9 358 85.2
PGSC0003DMG400007339 Solanum tuberosum HOM05D004378 ORTHO05D005269 1.9e-150 536.2 356 77.8
CSS0043718 Camellia sinensis var. sinensis HOM05D004378 ORTHO05D005269 3.6e-149 531.9 358 77.7
Peaxi162Scf00004g02527 Petunia axillaris HOM05D004378 ORTHO05D005269 4.9e-146 521.5 340 80.0
Sopen11g025430 Solanum pennellii HOM05D004378 ORTHO05D005269 2.4e-145 519.2 353 76.8
Nn2g15350 Nelumbo nucifera HOM05D004378 ORTHO05D005269 3.9e-143 511.9 363 72.2
Duzib168G0314 Durio zibethinus HOM05D004378 ORTHO05D005269 5.0e-143 511.5 360 73.6
Duzib150G1120 Durio zibethinus HOM05D004378 ORTHO05D005269 8.6e-143 510.8 348 75.0
DCAR_030049 Daucus carota HOM05D004378 ORTHO05D005269 3.3e-142 508.8 358 74.3
Thecc.09G234500 Theobroma cacao HOM05D004378 ORTHO05D005269 1.2e-141 506.9 345 75.7
Atru.chr3.2709 Acer truncatum HOM05D004378 ORTHO05D005269 4.7e-141 505.0 363 74.1
Dinv22174 Davidia involucrata HOM05D004378 ORTHO05D005269 6.2e-141 504.6 341 76.8
Manes.06G163800 Manihot esculenta HOM05D004378 ORTHO05D005269 3.1e-140 502.3 356 72.5
Actinidia16337 Actinidia chinensis HOM05D004378 ORTHO05D005269 8.9e-140 500.7 362 72.7
Gohir.A08G013900 Gossypium hirsutum HOM05D004378 ORTHO05D005269 1.2e-139 500.4 346 74.6
Gohir.D08G024400 Gossypium hirsutum HOM05D004378 ORTHO05D005269 1.2e-139 500.4 346 74.6
Gorai.004G019800 Gossypium raimondii HOM05D004378 ORTHO05D005269 1.2e-139 500.4 346 74.6
Nn7g36225 Nelumbo nucifera HOM05D004378 ORTHO05D005269 1.5e-139 500.0 359 72.7
Actinidia06909 Actinidia chinensis HOM05D004378 ORTHO05D005269 2.0e-139 499.6 341 75.7
TAR369G0513 Trochodendron aralioides HOM05D004378 ORTHO05D005269 2.0e-139 499.6 327 76.5
MSTRG.18430 Avicennia marina HOM05D004378 ORTHO05D005269 2.6e-139 499.2 342 72.8
Hma1.2p1_0368F.1_g137300 Hydrangea macrophylla HOM05D004378 ORTHO05D005269 7.5e-139 497.7 335 77.0
Rhsim13G0220800 Rhododendron simsii HOM05D004378 ORTHO05D005269 1.3e-138 496.9 334 76.0
Cc01_g04470 Coffea canephora HOM05D004378 ORTHO05D005269 1.7e-138 496.5 370 70.0
Migut.N02321 Erythranthe guttata HOM05D004378 ORTHO05D005269 4.9e-138 495.0 318 76.7
GSVIVG01025251001 Vitis vinifera HOM05D004378 ORTHO05D005269 6.4e-138 494.6 362 71.5
Potri.009G052800 Populus trichocarpa HOM05D004378 ORTHO05D005269 8.3e-138 494.2 362 73.2
COL.COLO4_07579 Corchorus olitorius HOM05D004378 ORTHO05D005269 1.4e-137 493.4 314 80.3
Ciclev10015746m.g Citrus clementina HOM05D004378 ORTHO05D005269 2.4e-137 492.7 363 70.5
Haze_23143 Corylus avellana HOM05D004378 ORTHO05D005269 2.4e-137 492.7 341 75.7
Migut.D00605 Erythranthe guttata HOM05D004378 ORTHO05D005269 2.4e-137 492.7 343 73.8
HanXRQChr13g0401501 Helianthus annuus HOM05D004378 ORTHO05D005269 2.1e-136 489.6 357 72.8
Prupe.4G250000 Prunus persica HOM05D004378 ORTHO05D005269 2.7e-136 489.2 356 71.1
arahy.Tifrunner.gnm1.ann1.YL0VRD Arachis hypogaea HOM05D004378 ORTHO05D005269 3.5e-136 488.8 360 71.7
Cfa009777 Carpinus fangiana HOM05D004378 ORTHO05D005269 3.5e-136 488.8 328 75.3
QL01p004640 Quercus lobata HOM05D004378 ORTHO05D005269 3.5e-136 488.8 366 69.7
arahy.Tifrunner.gnm1.ann1.B78H3K Arachis hypogaea HOM05D004378 ORTHO05D005269 4.6e-136 488.4 360 71.4
ECA233G1578 Erigeron canadensis HOM05D004378 ORTHO05D005269 4.6e-136 488.4 358 71.2
CiPaw.14G118500 Carya illinoinensis HOM05D004378 ORTHO05D005269 6.0e-136 488.0 366 69.4
Medtr3g061490 Medicago truncatula HOM05D004378 ORTHO05D005269 7.8e-136 487.6 355 72.1
TWI60G1037 Tripterygium wilfordii HOM05D004378 ORTHO05D005269 7.8e-136 487.6 355 71.0
Lj6g0003660 Lotus japonicus HOM05D004378 ORTHO05D005269 1.7e-135 486.5 364 70.6
Oeu001481.2 Olea europaea HOM05D004378 ORTHO05D005269 1.7e-135 486.5 328 75.3
CANSAT54G1532 Cannabis sativa HOM05D004378 ORTHO05D005269 3.9e-135 485.3 366 68.9
Potri.001G257500 Populus trichocarpa HOM05D004378 ORTHO05D005269 3.9e-135 485.3 369 70.5
RcHm_v2.0_Chr5g0052271 Rosa chinensis HOM05D004378 ORTHO05D005269 8.6e-135 484.2 367 70.0
SGA_v2.0_scaffold247G44883 Striga asiatica HOM05D004378 ORTHO05D005269 1.9e-134 483.0 336 73.2
TWI34G1172 Tripterygium wilfordii HOM05D004378 ORTHO05D005269 1.9e-134 483.0 351 72.6
Ca_14874_v3 Cicer arietinum L. HOM05D004378 ORTHO05D005269 4.3e-134 481.9 357 70.9
Nitab4.5_0001587g0030 Nicotiana tabacum HOM05D004378 ORTHO05D005269 4.3e-134 481.9 348 73.9
Glyma.08G336000 Glycine max HOM05D004378 ORTHO05D005269 1.2e-133 480.3 357 71.4
FvH4_3g28770 Fragaria vesca HOM05D004378 ORTHO05D005269 2.8e-133 479.2 366 69.7
MBI04_g36075_MAGBIO Magnolia biondii HOM05D004378 ORTHO05D005269 2.8e-133 479.2 347 71.5
TPR.G14725 Trifolium pratense HOM05D004378 ORTHO05D005269 3.6e-133 478.8 356 70.8
CDE05G0340 Ceratophyllum demersum HOM05D004378 ORTHO05D005269 4.7e-133 478.4 348 71.3
CSS0001002 Camellia sinensis var. sinensis HOM05D004378 ORTHO05D005269 6.2e-133 478.0 329 76.6
CiPaw.13G159900 Carya illinoinensis HOM05D004378 ORTHO05D005269 6.2e-133 478.0 351 71.5
Sabra16G0157500 Salix brachista HOM05D004378 ORTHO05D005269 8.1e-133 477.6 366 69.9
HanXRQChr02g0051301 Helianthus annuus HOM05D004378 ORTHO05D005269 1.1e-132 477.2 321 75.4
VMungo0540G0714 Vigna mungo HOM05D004378 ORTHO05D005269 1.4e-132 476.9 350 71.7
CDE05G0884 Ceratophyllum demersum HOM05D004378 ORTHO05D005269 5.2e-132 474.9 332 72.6
MD11G1192300 Malus domestica HOM05D004378 ORTHO05D005269 5.2e-132 474.9 358 69.0
Oeu016680.1 Olea europaea HOM05D004378 ORTHO05D005269 6.8e-132 474.6 331 72.8
Lalb_Chr15g0082531 Lupinus albus HOM05D004378 ORTHO05D005269 1.2e-131 473.8 357 69.7
Sed0026402 Sechium edule HOM05D004378 ORTHO05D005269 1.5e-131 473.4 357 68.3
FAN16G3181 Fragaria x ananassa HOM05D004378 ORTHO05D005269 3.4e-131 472.2 380 66.8
Nitab4.5_0002741g0140 Nicotiana tabacum HOM05D004378 ORTHO05D005269 4.4e-131 471.9 321 76.3
FAN25G2048 Fragaria x ananassa HOM05D004378 ORTHO05D005269 7.6e-131 471.1 386 66.6
FAN11G1994 Fragaria x ananassa HOM05D004378 ORTHO05D005269 1.3e-130 470.3 386 66.6
Phvul.006G062100 Phaseolus vulgaris HOM05D004378 ORTHO05D005269 3.8e-130 468.8 351 70.7
Glyma.18G071100 Glycine max HOM05D004378 ORTHO05D005269 8.4e-130 467.6 356 69.9
THA.LOC104799106 Tarenaya hassleriana HOM05D004378 ORTHO05D005269 2.4e-129 466.1 341 69.8
ClCG03G013210 Citrullus lanatus HOM05D004378 ORTHO05D005269 3.2e-129 465.7 365 67.7
Aqoxy1G00284 Aquilegia oxysepala HOM05D004378 ORTHO05D005269 4.1e-129 465.3 353 68.8
Eucgr.J00761 Eucalyptus grandis HOM05D004378 ORTHO05D005269 4.1e-129 465.3 356 68.5
MELO3C015197.2 Cucumis melo HOM05D004378 ORTHO05D005269 5.4e-129 464.9 364 68.1
Lalb_Chr18g0050451 Lupinus albus HOM05D004378 ORTHO05D005269 7.1e-129 464.5 360 69.4
EL10Ac4g10244 Beta vulgaris HOM05D004378 ORTHO05D005269 2.7e-128 462.6 358 67.6
CsaV3_1G042790 Cucumis sativus L. HOM05D004378 ORTHO05D005269 3.5e-128 462.2 357 68.3
PSO384G0525 Papaver somniferum HOM05D004378 ORTHO05D005269 3.5e-128 462.2 354 68.4
unitig_27.g24995 Utricularia gibba HOM05D004378 ORTHO05D005269 3.5e-128 462.2 371 66.0
PSO339G6315 Papaver somniferum HOM05D004378 ORTHO05D005269 4.6e-128 461.8 353 68.8
SGA_v2.0_scaffold8G04586 Striga asiatica HOM05D004378 ORTHO05D005269 1.3e-127 460.3 330 70.6
Sabra09G0038500 Salix brachista HOM05D004378 ORTHO05D005269 1.7e-127 459.9 380 65.3
Dinv36255 Davidia involucrata HOM05D004378 ORTHO05D005269 8.6e-127 457.6 282 81.2
Psat5g163880 Pisum sativum HOM05D004378 ORTHO05D005269 4.3e-126 455.3 357 66.4
unitig_699.g19136 Utricularia gibba HOM05D004378 ORTHO05D005269 9.6e-126 454.1 350 68.0
AUR62000126 Chenopodium quinoa HOM05D004378 ORTHO05D005269 1.6e-125 453.4 327 69.4
Lsat_1_v5_gn_6_26200 Lactuca sativa HOM05D004378 ORTHO05D005269 1.6e-125 453.4 348 68.4
Lsat_1_v5_gn_2_31060 Lactuca sativa HOM05D004378 ORTHO05D005269 2.8e-125 452.6 318 72.3
Ah.06g194140 Amaranthus hybridus HOM05D004378 ORTHO05D005269 3.6e-125 452.2 355 66.2
Hund22027 Selenicereus undatus HOM05D004378 ORTHO05D005269 5.8e-123 444.9 367 63.2
CARHR096800 Cardamine hirsuta HOM05D004378 ORTHO05D005269 1.3e-122 443.7 353 65.7
Lj2A629T47 Lonicera japonica HOM05D004378 ORTHO05D005269 1.4e-121 440.3 333 70.6
Aa31LG10G3540 Aethionema arabicum HOM05D004378 ORTHO05D005269 3.2e-121 439.1 310 72.3
ATR0332G071 Amborella trichopoda HOM05D004378 ORTHO05D005269 3.2e-121 439.1 349 66.5
THA.LOC104816878 Tarenaya hassleriana HOM05D004378 ORTHO05D005269 1.6e-120 436.8 346 67.1
BcaB04g20618 Brassica carinata HOM05D004378 ORTHO05D005269 6.0e-120 434.9 357 64.7
THA.LOC104824616 Tarenaya hassleriana HOM05D004378 ORTHO05D005269 1.0e-119 434.1 349 67.3
PGR119G1351 Punica granatum HOM05D004378 ORTHO05D005269 1.3e-119 433.7 321 69.2
A01p33870 Brassica napus HOM05D004378 ORTHO05D005269 2.3e-119 433.0 348 65.2
C05p43130 Brassica napus HOM05D004378 ORTHO05D005269 2.3e-119 433.0 356 64.6
BolC5t33043H Brassica oleracea HOM05D004378 ORTHO05D005269 2.3e-119 433.0 356 64.6
BraA05t21666Z Brassica rapa HOM05D004378 ORTHO05D005269 3.0e-119 432.6 358 64.8
Manes.14G003200 Manihot esculenta HOM05D004378 ORTHO05D005269 6.6e-119 431.4 347 68.0
A05p27790 Brassica napus HOM05D004378 ORTHO05D005269 8.7e-119 431.0 356 64.6
BraA01t03495Z Brassica rapa HOM05D004378 ORTHO05D005269 2.5e-118 429.5 348 64.4
BcaB06g26169 Brassica carinata HOM05D004378 ORTHO05D005269 4.3e-118 428.7 357 65.0
Zm00001eb064100 Zea mays HOM05D004378 ORTHO05D005269 4.3e-118 428.7 350 62.0
Sp3g18950 Schrenkiella parvula HOM05D004378 ORTHO05D005269 5.6e-118 428.3 359 64.6
Carub.0003s2090 Capsella rubella HOM05D004378 ORTHO05D005269 1.3e-117 427.2 360 63.6
BcaC01g03532 Brassica carinata HOM05D004378 ORTHO05D005269 2.1e-117 426.4 349 63.6
C03p51390 Brassica napus HOM05D004378 ORTHO05D005269 2.1e-117 426.4 349 63.6
Thhalv10021027m.g Eutrema salsugineum HOM05D004378 ORTHO05D005269 1.4e-116 423.7 357 64.7
BraA03t13351Z Brassica rapa HOM05D004378 ORTHO05D005269 1.8e-116 423.3 349 63.6
A03p41980 Brassica napus HOM05D004378 ORTHO05D005269 3.1e-116 422.5 349 63.3
Os02g0435000 Oryza sativa ssp. japonica HOM05D004378 ORTHO05D005269 3.1e-116 422.5 341 62.5
AT3G20920 Arabidopsis thaliana HOM05D004378 ORTHO05D005269 4.0e-116 422.2 341 66.0
Aa31LG8G7740 Aethionema arabicum HOM05D004378 ORTHO05D005269 1.5e-115 420.2 357 62.2
Zm00001eb210940 Zea mays HOM05D004378 ORTHO05D005269 1.5e-115 420.2 349 61.3
BolC3t17425H Brassica oleracea HOM05D004378 ORTHO05D005269 7.6e-115 417.9 358 62.0
BcaB06g26167 Brassica carinata HOM05D004378 ORTHO05D005269 7.1e-113 411.4 333 65.2
Actinidia06345 Actinidia chinensis HOM05D004378 ORTHO05D005269 1.0e-111 407.5 284 75.0
Sed0000917 Sechium edule HOM05D004378 ORTHO05D005269 7.4e-110 401.4 376 59.3
HPP92_024875 Vanilla planifolia HOM05D004378 ORTHO05D005269 4.8e-109 398.7 349 57.0
SEGI_31334 Sequoiadendron giganteum HOM05D004378 ORTHO05D005269 1.8e-108 396.7 347 59.7
vmacro04153 Vaccinium macrocarpon HOM05D004378 ORTHO05D005269 2.5e-102 376.3 470 50.0
BcaC05g28205 Brassica carinata HOM05D004378 ORTHO05D005269 1.6e-101 373.6 356 59.0
AL3G34880 Arabidopsis lyrata HOM05D004378 ORTHO05D005269 6.5e-98 361.7 272 67.3
SHI29790 Sapria himalayana HOM05D004378 ORTHO05D005269 6.7e-95 351.7 318 61.0
Lj1A330G22 Lonicera japonica HOM05D004378 ORTHO05D005269 2.8e-93 346.3 279 67.0
Mapoly0080s0045 Marchantia polymorpha HOM05D004378 ORTHO05D005269 2.9e-90 336.3 346 52.0
SMO117G0234 Selaginella moellendorffii HOM05D004378 ORTHO05D005269 5.5e-89 332.0 309 55.0
BolC1t04284H Brassica oleracea HOM05D004378 ORTHO05D005269 4.6e-88 328.9 256 64.5
CAN.G494.6 Capsicum annuum HOM05D004378 ORTHO05D005269 2.3e-87 326.6 225 75.1
Pp3c16_12820 Physcomitrium patens HOM05D004378 ORTHO05D005269 5.7e-86 322.0 297 55.2
AagrBONN_evm.TU.Sc2ySwM_228.3794 Anthoceros agrestis HOM05D004378 ORTHO05D005269 1.5e-83 313.9 342 49.7
Cpa.g.sc84.48 Carica papaya HOM05D004378 ORTHO05D005269 1.5e-83 313.9 229 72.5
Pp3c27_5530 Physcomitrium patens HOM05D004378 ORTHO05D005269 1.0e-82 311.2 331 51.7
MSTRG.21374 Avicennia marina HOM05D004378 ORTHO05D005269 1.7e-82 310.5 195 78.5
Sc09g0000750 Simmondsia chinensis HOM05D004378 ORTHO05D005269 1.3e-77 294.3 222 70.3
Peaxi162Scf00004g02528 Petunia axillaris HOM05D004378 ORTHO05D005269 1.4e-76 290.8 275 58.2
FAN21G1987 Fragaria x ananassa HOM05D004378 ORTHO05D005269 7.7e-75 285.0 223 67.7
Lalb_Chr20g0115221 Lupinus albus HOM05D004378 ORTHO05D005269 6.1e-72 275.4 214 67.3
MD03G1174500 Malus domestica HOM05D004378 ORTHO05D005269 1.4e-71 274.2 218 65.6
CBR_g54322 Chara braunii HOM05D004378 ORTHO05D005269 5.3e-68 262.3 273 48.0
TAR623G1006 Trochodendron aralioides HOM05D004378 ORTHO05D005269 5.0e-50 202.6 181 61.3
TAR057G0002 Trochodendron aralioides HOM05D004378 ORTHO05D005269 9.8e-46 188.3 132 72.0
MSTRG.21373 Avicennia marina HOM05D004378 ORTHO05D005269 8.3e-45 185.3 134 70.1
Lalb_Chr20g0115231 Lupinus albus HOM05D004378 ORTHO05D005269 4.1e-44 183.0 132 71.2
AUR62019307 Chenopodium quinoa HOM05D004378 ORTHO05D005269 5.6e-41 172.6 127 64.6
Sopen01g004010 Solanum pennellii HOM05D004378 ORTHO05D005269 5.2e-39 166.0 108 80.6
SHI32640 Sapria himalayana HOM05D004378 ORTHO05D000001 2.8e-32 143.7 87 75.9
Solyc03g096225.1 Solanum lycopersicum HOM05D004378 ORTHO05D005269 6.4e-29 132.5 86 72.1
Cre02.g084050 Chlamydomonas reinhardtii HOM05D004378 ORTHO05D005269 9.2e-28 128.6 270 30.0
MCO14G148 Micromonas commoda HOM05D004378 ORTHO05D005269 3.9e-18 96.7 316 26.9


User provided reference genes

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