Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1200.2 Capsicum annuum HOM05D006683 ORTHO05D008629 1.3e-114 416.4 205 100.0
Nitab4.5_0000334g0170 Nicotiana tabacum HOM05D006683 ORTHO05D008629 5.0e-58 228.4 194 63.9
Nitab4.5_0011843g0020 Nicotiana tabacum HOM05D006683 ORTHO05D008629 4.2e-57 225.3 194 62.9
Nitab4.5_0000306g0260 Nicotiana tabacum HOM05D006683 ORTHO05D008629 1.0e-39 167.5 178 53.4
PGSC0003DMG400006076 Solanum tuberosum HOM05D006683 ORTHO05D008629 8.2e-37 157.9 189 50.3
PGSC0003DMG400003795 Solanum tuberosum HOM05D006683 ORTHO05D008629 4.5e-35 152.1 189 48.7
PGSC0003DMG400036801 Solanum tuberosum HOM05D006683 ORTHO05D008629 2.9e-34 149.4 191 47.6
CAN.G1690.10 Capsicum annuum HOM05D006683 ORTHO05D008629 3.8e-34 149.1 210 46.7
Nitab4.5_0000941g0150 Nicotiana tabacum HOM05D006683 ORTHO05D008629 5.0e-34 148.7 182 52.2
Nitab4.5_0002398g0060 Nicotiana tabacum HOM05D006683 ORTHO05D008629 6.5e-34 148.3 154 57.8
PGSC0003DMG400022665 Solanum tuberosum HOM05D006683 ORTHO05D008629 1.1e-33 147.5 206 43.7
PGSC0003DMG400035387 Solanum tuberosum HOM05D006683 ORTHO05D008629 2.5e-33 146.4 189 49.2
Peaxi162Scf00145g01526 Petunia axillaris HOM05D006683 ORTHO05D008629 9.4e-33 144.4 180 50.0
CAN.G500.55 Capsicum annuum HOM05D006683 ORTHO05D008629 2.1e-32 143.3 182 48.9
PGSC0003DMG400012788 Solanum tuberosum HOM05D006683 ORTHO05D008629 2.7e-32 142.9 187 48.7
Nitab4.5_0000306g0290 Nicotiana tabacum HOM05D006683 ORTHO05D008629 4.7e-32 142.1 154 55.2
PGSC0003DMG400006095 Solanum tuberosum HOM05D006683 ORTHO05D008629 6.1e-32 141.7 187 46.0
Nitab4.5_0004698g0030 Nicotiana tabacum HOM05D006683 ORTHO05D008629 1.0e-31 141.0 173 48.6
PGSC0003DMG400041893 Solanum tuberosum HOM05D006683 ORTHO05D008629 1.4e-31 140.6 196 43.4
Sopen01g028730 Solanum pennellii HOM05D006683 ORTHO05D008629 2.3e-31 139.8 206 44.2
CAN.G500.84 Capsicum annuum HOM05D006683 ORTHO05D008629 3.0e-31 139.4 186 47.3
CAN.G500.88 Capsicum annuum HOM05D006683 ORTHO05D008629 3.0e-31 139.4 186 47.3
Nitab4.5_0000306g0210 Nicotiana tabacum HOM05D006683 ORTHO05D008629 3.0e-31 139.4 177 50.3
Sopen09g031780 Solanum pennellii HOM05D006683 ORTHO05D008629 5.2e-31 138.7 183 44.8
PGSC0003DMG400042529 Solanum tuberosum HOM05D006683 ORTHO05D008629 6.7e-31 138.3 188 45.2
PGSC0003DMG400037968 Solanum tuberosum HOM05D006683 ORTHO05D008629 8.8e-31 137.9 175 50.9
Peaxi162Scf00145g01527 Petunia axillaris HOM05D006683 ORTHO05D008629 3.3e-30 136.0 184 45.7
PGSC0003DMG400025727 Solanum tuberosum HOM05D006683 ORTHO05D008629 5.7e-30 135.2 174 50.0
PGSC0003DMG400040306 Solanum tuberosum HOM05D006683 ORTHO05D008629 9.7e-30 134.4 175 52.0
PGSC0003DMG400003430 Solanum tuberosum HOM05D006683 ORTHO05D008629 1.3e-29 134.0 179 48.0
CAN.G500.48 Capsicum annuum HOM05D006683 ORTHO05D008629 2.8e-29 132.9 207 43.0
PGSC0003DMG400003835 Solanum tuberosum HOM05D006683 ORTHO05D008629 6.3e-29 131.7 158 51.3
PGSC0003DMG400003794 Solanum tuberosum HOM05D006683 ORTHO05D008629 8.2e-29 131.3 174 48.3
Peaxi162Scf00637g00116 Petunia axillaris HOM05D006683 ORTHO05D008629 1.4e-28 130.6 198 41.9
PGSC0003DMG400008700 Solanum tuberosum HOM05D006683 ORTHO05D008629 4.5e-27 125.6 174 48.9
PGSC0003DMG400026640 Solanum tuberosum HOM05D006683 ORTHO05D008629 4.5e-27 125.6 189 41.3
CAN.G107.17 Capsicum annuum HOM05D006683 ORTHO05D008629 5.9e-27 125.2 172 46.5
CAN.G500.45 Capsicum annuum HOM05D000344 ORTHO05D008629 5.9e-27 125.2 179 45.8
PGSC0003DMG400023203 Solanum tuberosum HOM05D006683 ORTHO05D008629 5.5e-25 118.6 175 46.9
Nitab4.5_0003868g0040 Nicotiana tabacum HOM05D006683 ORTHO05D008629 9.4e-25 117.9 188 39.9
Nitab4.5_0000941g0140 Nicotiana tabacum HOM05D006683 ORTHO05D008629 1.6e-24 117.1 151 49.0
Nitab4.5_0004698g0060 Nicotiana tabacum HOM05D006683 ORTHO05D008629 1.6e-24 117.1 164 47.0
Peaxi162Scf00493g00441 Petunia axillaris HOM05D006683 ORTHO05D008629 2.1e-24 116.7 178 42.1
PGSC0003DMG400018866 Solanum tuberosum HOM05D006683 ORTHO05D008629 2.7e-24 116.3 158 44.9
Nitab4.5_0003868g0030 Nicotiana tabacum HOM05D006683 ORTHO05D008629 6.1e-24 115.2 178 44.9
PGSC0003DMG400018867 Solanum tuberosum HOM05D006683 ORTHO05D008629 8.8e-23 111.3 161 43.5
PGSC0003DMG400018861 Solanum tuberosum HOM05D006683 ORTHO05D008629 3.4e-22 109.4 159 44.7
Peaxi162Scf00493g00440 Petunia axillaris HOM05D006683 ORTHO05D008629 7.5e-22 108.2 145 47.6
PGSC0003DMG400003802 Solanum tuberosum HOM05D006683 ORTHO05D008629 1.3e-21 107.5 159 46.5
PGSC0003DMG400036410 Solanum tuberosum HOM05D006683 ORTHO05D008629 2.2e-21 106.7 165 47.3
PGSC0003DMG400003800 Solanum tuberosum HOM05D006683 ORTHO05D008629 1.8e-20 103.6 179 41.3
Peaxi162Scf00244g01121 Petunia axillaris HOM05D006683 ORTHO05D008629 4.1e-20 102.4 172 40.1
PGSC0003DMG400018858 Solanum tuberosum HOM05D006683 ORTHO05D008629 4.5e-19 99.0 190 36.8
CAN.G888.16 Capsicum annuum HOM05D006683 ORTHO05D008629 7.7e-19 98.2 194 36.6
Peaxi162Scf00047g00852 Petunia axillaris HOM05D006683 ORTHO05D008629 1.7e-18 97.1 137 46.0
CAN.G749.7 Capsicum annuum HOM05D006683 ORTHO05D008629 2.3e-18 96.7 181 42.0
Nitab4.5_0002205g0070 Nicotiana tabacum HOM05D006683 ORTHO05D008629 8.6e-18 94.7 198 36.4
Peaxi162Scf00047g00846 Petunia axillaris HOM05D006683 ORTHO05D008629 8.6e-18 94.7 130 43.8
PGSC0003DMG400003834 Solanum tuberosum HOM05D006683 ORTHO05D008629 1.1e-17 94.4 152 41.4
Peaxi162Scf00145g01525 Petunia axillaris HOM05D006683 ORTHO05D008629 4.2e-17 92.4 175 36.6
Nitab4.5_0000022g0360 Nicotiana tabacum HOM05D006683 ORTHO05D008629 5.5e-17 92.0 100 54.0
Nitab4.5_0003070g0050 Nicotiana tabacum HOM05D006683 ORTHO05D008629 2.3e-15 86.7 78 59.0
Nitab4.5_0011737g0030 Nicotiana tabacum HOM05D006683 ORTHO05D008629 2.3e-15 86.7 150 45.3
CAN.G500.59 Capsicum annuum HOM05D006683 ORTHO05D008629 1.2e-14 84.3 126 42.9
Nitab4.5_0008346g0010 Nicotiana tabacum HOM05D006683 ORTHO05D008629 1.5e-14 84.0 191 32.5
PGSC0003DMG400044512 Solanum tuberosum HOM05D006683 ORTHO05D008629 5.7e-14 82.0 89 51.7
CAN.G500.46 Capsicum annuum HOM05D006683 ORTHO05D008629 2.2e-13 80.1 82 53.7
CAN.G500.56 Capsicum annuum HOM05D006683 ORTHO05D008629 2.8e-13 79.7 115 45.2
PGSC0003DMG400038441 Solanum tuberosum HOM05D006683 ORTHO05D008629 6.3e-13 78.6 123 42.3
CAN.G947.31 Capsicum annuum HOM05D006683 ORTHO05D008629 3.1e-12 76.3 132 37.9
Potri.001G395000 Populus trichocarpa HOM05D001477 ORTHO05D001182 4.1e-12 75.9 203 26.6
CAN.G500.89 Capsicum annuum HOM05D006683 ORTHO05D008629 5.4e-12 75.5 119 40.3
CAN.G107.36 Capsicum annuum HOM05D006683 ORTHO05D008629 7.8e-11 71.6 86 48.8
PGSC0003DMG400023911 Solanum tuberosum HOM05D006683 ORTHO05D008629 1.0e-10 71.2 123 37.4
Ciclev10033697m.g Citrus clementina HOM05D001477 ORTHO05D001182 1.7e-10 70.5 154 30.5
PGSC0003DMG400038781 Solanum tuberosum HOM05D006683 ORTHO05D008629 1.7e-10 70.5 71 53.5
Peaxi162Scf00493g00437 Petunia axillaris HOM05D006683 ORTHO05D008629 2.9e-10 69.7 178 34.8
Peaxi162Scf00566g00610 Petunia axillaris HOM05D006683 ORTHO05D008629 2.9e-10 69.7 96 41.7
Hma1.2p1_0978F.1_g243340 Hydrangea macrophylla HOM05D001477 ORTHO05D001182 3.8e-10 69.3 181 27.6
Peaxi162Scf00244g00105 Petunia axillaris HOM05D006683 ORTHO05D008629 8.6e-10 68.2 122 38.5
Ciclev10025841m.g Citrus clementina HOM05D001477 ORTHO05D001182 2.5e-09 66.6 176 29.5
CAN.G947.30 Capsicum annuum HOM05D006683 ORTHO05D008629 4.3e-09 65.9 112 37.5
COL.COLO4_30418 Corchorus olitorius HOM05D001477 ORTHO05D001182 5.6e-09 65.5 161 29.8
Nitab4.5_0002205g0060 Nicotiana tabacum HOM05D006683 ORTHO05D008629 5.6e-09 65.5 168 32.1
Nitab4.5_0007957g0020 Nicotiana tabacum HOM05D006683 ORTHO05D008629 5.6e-09 65.5 70 52.9
PGR142G1584 Punica granatum HOM05D001477 ORTHO05D001182 7.3e-09 65.1 174 30.5
QL04p060686 Quercus lobata HOM05D001477 ORTHO05D001182 1.6e-08 63.9 203 27.6
COL.COLO4_07576 Corchorus olitorius HOM05D001477 ORTHO05D001182 2.1e-08 63.5 170 31.2
Migut.E00538 Erythranthe guttata HOM05D005930 ORTHO05D003423 3.6e-08 62.8 155 26.5
PGR083G1644 Punica granatum HOM05D001477 ORTHO05D001182 3.6e-08 62.8 173 28.9
Glyma.13G246100 Glycine max HOM05D007484 ORTHO05D008290 6.1e-08 62.0 178 27.5
Dinv23707 Davidia involucrata HOM05D001396 ORTHO05D000493 1.0e-07 61.2 152 30.9
PGR083G1680 Punica granatum HOM05D001477 ORTHO05D001182 1.0e-07 61.2 173 32.4
QL05p016344 Quercus lobata HOM05D001477 ORTHO05D001182 1.0e-07 61.2 194 24.7
Rhsim02G0017300 Rhododendron simsii HOM05D001477 ORTHO05D001182 1.0e-07 61.2 154 31.2
Rhsim08G0230500 Rhododendron simsii HOM05D001477 ORTHO05D001182 1.0e-07 61.2 167 29.3
Atru.chr1.3375 Acer truncatum HOM05D006683 ORTHO05D001182 1.4e-07 60.8 128 29.7
TAR627G0813 Trochodendron aralioides HOM05D000421 ORTHO05D001182 1.4e-07 60.8 173 27.2
COL.COLO4_12879 Corchorus olitorius HOM05D001477 ORTHO05D001182 2.3e-07 60.1 153 30.1
Actinidia26014 Actinidia chinensis HOM05D001477 ORTHO05D001182 3.0e-07 59.7 185 25.9
Dinv37940 Davidia involucrata HOM05D001477 ORTHO05D001182 3.0e-07 59.7 188 26.1
PGR083G2268 Punica granatum HOM05D001477 ORTHO05D001182 3.0e-07 59.7 156 28.2
PGR083G2834 Punica granatum HOM05D001477 ORTHO05D001182 3.0e-07 59.7 161 29.2
Peaxi162Scf00038g01239 Petunia axillaris HOM05D001477 ORTHO05D001182 4.0e-07 59.3 161 26.1
QL04p060682 Quercus lobata HOM05D001477 ORTHO05D001182 4.0e-07 59.3 203 28.6
SGA_v2.0_scaffold37G14882 Striga asiatica HOM05D005930 ORTHO05D003423 4.0e-07 59.3 179 25.7
QL01p017794 Quercus lobata HOM05D001477 ORTHO05D001182 5.2e-07 58.9 140 27.9
QL05p016571 Quercus lobata HOM05D001477 ORTHO05D001182 5.2e-07 58.9 169 24.9
Cfa020769 Carpinus fangiana HOM05D001477 ORTHO05D001182 6.8e-07 58.5 147 30.6
PGR083G2101 Punica granatum HOM05D001477 ORTHO05D001182 6.8e-07 58.5 200 26.5
QL05p010063 Quercus lobata HOM05D001477 ORTHO05D001182 8.9e-07 58.2 141 30.5
Rhsim05G0177500 Rhododendron simsii HOM05D002667 ORTHO05D002909 8.9e-07 58.2 159 27.0
Haze_18985 Corylus avellana HOM05D001477 ORTHO05D001182 1.2e-06 57.8 142 27.5
QL05p018582 Quercus lobata HOM05D001477 ORTHO05D001182 1.2e-06 57.8 180 22.2
QL93p1866_0198 Quercus lobata HOM05D001477 ORTHO05D001182 1.2e-06 57.8 180 22.2
Cfa020687 Carpinus fangiana HOM05D001477 ORTHO05D001182 1.5e-06 57.4 142 30.3
ECA238G4135 Erigeron canadensis HOM05D001477 ORTHO05D001182 1.5e-06 57.4 120 29.2
PGR031G0401 Punica granatum HOM05D001477 ORTHO05D001182 1.5e-06 57.4 179 28.5
Haze_15913 Corylus avellana HOM05D001477 ORTHO05D001182 2.0e-06 57.0 180 22.8
Eucgr.E02620 Eucalyptus grandis HOM05D001396 ORTHO05D000493 2.6e-06 56.6 163 27.0
Lsat_1_v5_gn_4_78141 Lactuca sativa HOM05D008987 ORTHO05D011272 2.6e-06 56.6 184 25.0
Nitab4.5_0004698g0080 Nicotiana tabacum HOM05D006683 ORTHO05D008629 2.6e-06 56.6 140 37.1
Rhsim08G0241400 Rhododendron simsii HOM05D001477 ORTHO05D001182 2.6e-06 56.6 174 24.7
Actinidia24716 Actinidia chinensis HOM05D006683 ORTHO05D008629 3.4e-06 56.2 166 22.9
Solyc03g121290.4 Solanum lycopersicum HOM05D001477 ORTHO05D001182 3.4e-06 56.2 160 25.6
Sopen03g040100 Solanum pennellii HOM05D001477 ORTHO05D001182 3.4e-06 56.2 161 25.5
PGSC0003DMG400002600 Solanum tuberosum HOM05D001477 ORTHO05D001182 3.4e-06 56.2 161 23.6
CAN.G1668.1 Capsicum annuum HOM05D001477 ORTHO05D001182 4.4e-06 55.8 144 27.8
AUR62015215 Chenopodium quinoa HOM05D001477 ORTHO05D001182 4.4e-06 55.8 166 28.3
Ciclev10025241m.g Citrus clementina HOM05D001477 ORTHO05D001182 4.4e-06 55.8 158 26.6
Prupe.3G053600 Prunus persica HOM05D001477 ORTHO05D001182 4.4e-06 55.8 173 23.7
Cfa003613 Carpinus fangiana HOM05D001477 ORTHO05D001182 5.7e-06 55.5 180 22.2
Ciclev10003331m.g Citrus clementina HOM05D001477 ORTHO05D001182 5.7e-06 55.5 157 31.8
HanXRQChr12g0365501 Helianthus annuus HOM05D001477 ORTHO05D001182 5.7e-06 55.5 144 25.0
HanXRQChr15g0470331 Helianthus annuus HOM05D001477 ORTHO05D001182 5.7e-06 55.5 139 28.8
QL05p032382 Quercus lobata HOM05D001477 ORTHO05D001182 5.7e-06 55.5 157 24.8
QL05p033764 Quercus lobata HOM05D001477 ORTHO05D001182 5.7e-06 55.5 157 24.8
SGA_v2.0_scaffold12G06246 Striga asiatica HOM05D005930 ORTHO05D003423 5.7e-06 55.5 219 26.0
CAN.G1690.11 Capsicum annuum HOM05D006683 ORTHO05D008629 7.5e-06 55.1 184 32.1
vmacro18828 Vaccinium macrocarpon HOM05D001477 ORTHO05D001182 9.8e-06 54.7 148 29.7


User provided reference genes

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