Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1191.4 Capsicum annuum HOM05D003750 ORTHO05D004337 6.3e-107 391.7 383 100.0
PGSC0003DMG400021281 Solanum tuberosum HOM05D003750 ORTHO05D004337 9.9e-52 208.4 112 91.1
Nitab4.5_0002027g0180 Nicotiana tabacum HOM05D003750 ORTHO05D004337 3.8e-51 206.5 162 69.8
Solyc10g007800.3 Solanum lycopersicum HOM05D003750 ORTHO05D004337 2.4e-50 203.8 426 67.4
Nitab4.5_0001402g0030 Nicotiana tabacum HOM05D003750 ORTHO05D004337 4.2e-50 203.0 166 71.1
Sopen10g003700 Solanum pennellii HOM05D003750 ORTHO05D004337 7.1e-50 202.2 426 67.1
CAN.G585.54 Capsicum annuum HOM05D003750 ORTHO05D004337 4.9e-43 179.5 167 65.3
Nitab4.5_0001675g0060 Nicotiana tabacum HOM05D003750 ORTHO05D004337 4.9e-43 179.5 162 67.9
Peaxi162Scf00688g00432 Petunia axillaris HOM05D003750 ORTHO05D004337 8.4e-43 178.7 167 65.9
Nitab4.5_0013539g0020 Nicotiana tabacum HOM05D003750 ORTHO05D004337 1.2e-41 174.9 162 66.0
Peaxi162Scf00807g00024 Petunia axillaris HOM05D003750 ORTHO05D004337 1.2e-41 174.9 114 73.7
CAN.G164.22 Capsicum annuum HOM05D003750 ORTHO05D004337 2.1e-41 174.1 159 67.9
PGSC0003DMG400017342 Solanum tuberosum HOM05D003750 ORTHO05D004337 2.7e-41 173.7 114 72.8
Potri.002G060800 Populus trichocarpa HOM05D003750 ORTHO05D004337 3.5e-41 173.3 144 61.8
Solyc07g055950.3 Solanum lycopersicum HOM05D003750 ORTHO05D004337 4.6e-41 172.9 114 73.7
Sopen07g029310 Solanum pennellii HOM05D003750 ORTHO05D004337 7.9e-41 172.2 114 72.8
Nitab4.5_0000446g0080 Nicotiana tabacum HOM05D003750 ORTHO05D004337 1.0e-40 171.8 114 71.9
Nitab4.5_0006934g0020 Nicotiana tabacum HOM05D003750 ORTHO05D004337 1.3e-40 171.4 114 71.9
Peaxi162Scf00035g00302 Petunia axillaris HOM05D003750 ORTHO05D004337 5.1e-40 169.5 437 54.0
TWI14G1010 Tripterygium wilfordii HOM05D003750 ORTHO05D004337 8.7e-40 168.7 108 70.4
TAR626G1101 Trochodendron aralioides HOM05D003750 ORTHO05D004337 1.1e-39 168.3 157 58.0
CiPaw.03G189300 Carya illinoinensis HOM05D003750 ORTHO05D004337 1.5e-39 167.9 111 72.1
Oeu040027.1 Olea europaea HOM05D003750 ORTHO05D004337 1.5e-39 167.9 167 67.7
Phvul.006G033900 Phaseolus vulgaris HOM05D003750 ORTHO05D004337 1.5e-39 167.9 141 65.2
Sabra02G0049300 Salix brachista HOM05D003750 ORTHO05D004337 1.5e-39 167.9 144 66.7
PGSC0003DMG400007796 Solanum tuberosum HOM05D003750 ORTHO05D004337 2.5e-39 167.2 108 74.1
TWI59G1023 Tripterygium wilfordii HOM05D003750 ORTHO05D004337 3.3e-39 166.8 111 70.3
Cpa.g.sc50.77 Carica papaya HOM05D003750 ORTHO05D004337 4.3e-39 166.4 111 71.2
Oeu020066.1 Olea europaea HOM05D003750 ORTHO05D004337 4.3e-39 166.4 163 65.6
Potri.005G200900 Populus trichocarpa HOM05D003750 ORTHO05D004337 7.4e-39 165.6 162 54.9
Haze_13489 Corylus avellana HOM05D003750 ORTHO05D004337 9.6e-39 165.2 139 63.3
TAR624G1252 Trochodendron aralioides HOM05D002606 ORTHO05D003016 2.1e-38 164.1 154 56.5
MSTRG.15053 Avicennia marina HOM05D003750 ORTHO05D004337 2.8e-38 163.7 120 70.0
Cc05_g09310 Coffea canephora HOM05D003750 ORTHO05D004337 2.8e-38 163.7 146 58.9
Duzib264G0293 Durio zibethinus HOM05D003750 ORTHO05D004337 2.8e-38 163.7 111 71.2
Solyc12g011010.2 Solanum lycopersicum HOM05D003750 ORTHO05D004337 2.8e-38 163.7 108 74.1
AT2G42840 Arabidopsis thaliana HOM05D003750 ORTHO05D004337 4.8e-38 162.9 180 57.8
Cfa022914 Carpinus fangiana HOM05D003750 ORTHO05D004337 6.2e-38 162.5 109 68.8
Sabra05G0152900 Salix brachista HOM05D003750 ORTHO05D004337 6.2e-38 162.5 114 68.4
Glyma.08G309700 Glycine max HOM05D003750 ORTHO05D004337 8.1e-38 162.2 111 70.3
SGA_v2.0_scaffold70G23672 Striga asiatica HOM05D003750 ORTHO05D004337 8.1e-38 162.2 115 69.6
QL08p043924 Quercus lobata HOM05D003750 ORTHO05D004337 1.4e-37 161.4 108 70.4
Glyma.18G106400 Glycine max HOM05D003750 ORTHO05D004337 1.8e-37 161.0 163 61.3
Duzib147G0801 Durio zibethinus HOM05D003750 ORTHO05D004337 2.4e-37 160.6 111 70.3
Sopen12g006370 Solanum pennellii HOM05D003750 ORTHO05D004337 2.4e-37 160.6 109 74.3
ClCG09G022350 Citrullus lanatus HOM05D003750 ORTHO05D004337 3.1e-37 160.2 111 67.6
Duzib187G0136 Durio zibethinus HOM05D003750 ORTHO05D004337 3.1e-37 160.2 110 69.1
Eucgr.K01198 Eucalyptus grandis HOM05D003750 ORTHO05D004337 3.1e-37 160.2 145 61.4
Gohir.D04G037100 Gossypium hirsutum HOM05D003750 ORTHO05D004337 4.0e-37 159.8 111 68.5
VMungo0540G2251 Vigna mungo HOM05D003750 ORTHO05D004337 4.0e-37 159.8 160 59.4
Actinidia11198 Actinidia chinensis HOM05D003750 ORTHO05D004337 5.3e-37 159.5 114 67.5
CSS0030446 Camellia sinensis var. sinensis HOM05D003750 ORTHO05D004337 5.3e-37 159.5 114 69.3
Carub.0004s2528 Capsella rubella HOM05D003750 ORTHO05D004337 5.3e-37 159.5 160 59.4
COL.COLO4_33737 Corchorus olitorius HOM05D003750 ORTHO05D004337 9.0e-37 158.7 111 68.5
CsaV3_6G038000 Cucumis sativus L. HOM05D003750 ORTHO05D004337 9.0e-37 158.7 111 65.8
Dinv12695 Davidia involucrata HOM05D003750 ORTHO05D004337 1.2e-36 158.3 111 69.4
Gorai.012G041900 Gossypium raimondii HOM05D003750 ORTHO05D004337 1.2e-36 158.3 111 67.6
THA.LOC104803179 Tarenaya hassleriana HOM05D003750 ORTHO05D004337 1.2e-36 158.3 111 70.3
MELO3C019689.2 Cucumis melo HOM05D003750 ORTHO05D004337 1.5e-36 157.9 114 66.7
Glyma.02G287400 Glycine max HOM05D003750 ORTHO05D004337 1.5e-36 157.9 111 67.6
Psat0s4925g0080 Pisum sativum HOM05D003750 ORTHO05D004337 1.5e-36 157.9 161 52.2
BcaB06g29267 Brassica carinata HOM05D003750 ORTHO05D004337 2.0e-36 157.5 167 55.7
Manes.01G128300 Manihot esculenta HOM05D003750 ORTHO05D004337 2.0e-36 157.5 112 67.0
CsaV3_6G015810 Cucumis sativus L. HOM05D003750 ORTHO05D004337 2.6e-36 157.1 114 66.7
Lsat_1_v5_gn_3_35901 Lactuca sativa HOM05D003750 ORTHO05D004337 2.6e-36 157.1 110 70.0
Gohir.A05G378400 Gossypium hirsutum HOM05D003750 ORTHO05D004337 3.4e-36 156.8 111 67.6
Rhsim06G0118400 Rhododendron simsii HOM05D003750 ORTHO05D004337 4.5e-36 156.4 112 66.1
BcaC02g07218 Brassica carinata HOM05D003750 ORTHO05D004337 5.8e-36 156.0 113 69.0
A04p32410 Brassica napus HOM05D003750 ORTHO05D004337 5.8e-36 156.0 113 69.0
C04p69930 Brassica napus HOM05D003750 ORTHO05D004337 5.8e-36 156.0 113 69.0
BolC4t28493H Brassica oleracea HOM05D003750 ORTHO05D004337 5.8e-36 156.0 113 69.0
BraA04t18694Z Brassica rapa HOM05D003750 ORTHO05D004337 5.8e-36 156.0 113 69.0
Thhalv10016927m.g Eutrema salsugineum HOM05D003750 ORTHO05D004337 5.8e-36 156.0 180 52.8
vmacro12451 Vaccinium macrocarpon HOM05D003750 ORTHO05D004337 5.8e-36 156.0 112 67.0
Migut.M00516 Erythranthe guttata HOM05D003750 ORTHO05D004337 7.6e-36 155.6 110 69.1
Lalb_Chr04g0248731 Lupinus albus HOM05D003750 ORTHO05D004337 1.0e-35 155.2 108 65.7
Lj6g0002200 Lotus japonicus HOM05D003750 ORTHO05D004337 1.3e-35 154.8 109 66.1
ClCG02G018380 Citrullus lanatus HOM05D003750 ORTHO05D004337 1.7e-35 154.5 147 65.3
Thecc.01G160900 Theobroma cacao HOM05D003750 ORTHO05D004337 2.2e-35 154.1 111 67.6
BcaNung06740 Brassica carinata HOM05D003750 ORTHO05D004337 2.9e-35 153.7 113 66.4
A05p03190 Brassica napus HOM05D003750 ORTHO05D004337 2.9e-35 153.7 113 66.4
C04p03840 Brassica napus HOM05D003750 ORTHO05D004337 2.9e-35 153.7 113 66.4
BolC4t22020H Brassica oleracea HOM05D003750 ORTHO05D004337 2.9e-35 153.7 113 66.4
BraA05t19309Z Brassica rapa HOM05D003750 ORTHO05D004337 2.9e-35 153.7 113 66.4
LjContig00310g0001182 Lotus japonicus HOM05D003750 ORTHO05D004337 2.9e-35 153.7 111 64.9
AL4G41450 Arabidopsis lyrata HOM05D003750 ORTHO05D004337 3.8e-35 153.3 115 67.8
arahy.Tifrunner.gnm1.ann1.Y7JGW6 Arachis hypogaea HOM05D003750 ORTHO05D004337 3.8e-35 153.3 111 64.9
CARHR137920 Cardamine hirsuta HOM05D003750 ORTHO05D004337 3.8e-35 153.3 112 68.8
HanXRQChr06g0171371 Helianthus annuus HOM05D003750 ORTHO05D004337 3.8e-35 153.3 145 57.2
Phvul.008G190900 Phaseolus vulgaris HOM05D003750 ORTHO05D004337 3.8e-35 153.3 111 64.9
arahy.Tifrunner.gnm1.ann1.UWZ29M Arachis hypogaea HOM05D003750 ORTHO05D004337 4.9e-35 152.9 111 64.9
Glyma.14G027551 Glycine max HOM05D003750 ORTHO05D004337 4.9e-35 152.9 159 53.5
TPR.G12519 Trifolium pratense HOM05D003750 ORTHO05D004337 4.9e-35 152.9 111 63.1
Aa31LG1G24600 Aethionema arabicum HOM05D003750 ORTHO05D004337 6.5e-35 152.5 113 67.3
ECA246G0286 Erigeron canadensis HOM05D003750 ORTHO05D004337 6.5e-35 152.5 112 67.9
Psat2g014640 Pisum sativum HOM05D003750 ORTHO05D004337 6.5e-35 152.5 159 50.3
Medtr3g089570 Medicago truncatula HOM05D003750 ORTHO05D004337 8.4e-35 152.1 109 63.3
PGR142G2515 Punica granatum HOM05D003750 ORTHO05D004337 8.4e-35 152.1 111 66.7
MD17G1140600 Malus domestica HOM05D003750 ORTHO05D004337 1.1e-34 151.8 115 64.3
Sp4g24960 Schrenkiella parvula HOM05D003750 ORTHO05D004337 1.1e-34 151.8 113 66.4
VMungo0647G1422 Vigna mungo HOM05D003750 ORTHO05D004337 1.1e-34 151.8 109 64.2
MSTRG.6755 Avicennia marina HOM05D003750 ORTHO05D004337 1.9e-34 151.0 114 68.4
MD09G1154000 Malus domestica HOM05D003750 ORTHO05D004337 1.9e-34 151.0 115 64.3
FvH4_6g38100 Fragaria vesca HOM05D003750 ORTHO05D004337 2.5e-34 150.6 115 65.2
FAN05G3098 Fragaria x ananassa HOM05D003750 ORTHO05D004337 2.5e-34 150.6 135 63.0
Lalb_Chr10g0106741 Lupinus albus HOM05D003750 ORTHO05D004337 2.5e-34 150.6 107 64.5
Ca_27365_v3 Cicer arietinum L. HOM05D003750 ORTHO05D004337 5.5e-34 149.4 112 62.5
Atru.chr6.1510 Acer truncatum HOM05D003750 ORTHO05D004337 7.1e-34 149.1 109 64.2
Prupe.3G171000 Prunus persica HOM05D003750 ORTHO05D004337 9.3e-34 148.7 115 64.3
Lalb_Chr20g0108881 Lupinus albus HOM05D003750 ORTHO05D004337 1.2e-33 148.3 111 65.8
FAN14G5523 Fragaria x ananassa HOM05D003750 ORTHO05D004337 2.1e-33 147.5 115 64.3
RcHm_v2.0_Chr2g0151161 Rosa chinensis HOM05D003750 ORTHO05D004337 2.1e-33 147.5 115 64.3
Lalb_Chr17g0348311 Lupinus albus HOM05D003750 ORTHO05D004337 3.5e-33 146.7 173 50.9
FAN02G2641 Fragaria x ananassa HOM05D003750 ORTHO05D004337 4.6e-33 146.4 115 63.5
CANSAT64G2056 Cannabis sativa HOM05D003750 ORTHO05D004337 6.0e-33 146.0 106 63.2
TPR.G16759 Trifolium pratense HOM05D003750 ORTHO05D004337 1.0e-32 145.2 107 63.6
SalBow7G0202 Salvia bowleyana HOM05D003750 ORTHO05D004337 1.3e-32 144.8 126 59.5
SalBow7G1469 Salvia bowleyana HOM05D003750 ORTHO05D004337 1.8e-32 144.4 106 64.2
unitig_37.g12854 Utricularia gibba HOM05D003750 ORTHO05D004337 1.8e-32 144.4 108 62.0
arahy.Tifrunner.gnm1.ann1.N94NTJ Arachis hypogaea HOM05D003750 ORTHO05D004337 3.0e-32 143.7 107 63.6
Lalb_Chr19g0137861 Lupinus albus HOM05D003750 ORTHO05D004337 3.0e-32 143.7 111 64.9
Sed0014259 Sechium edule HOM05D003750 ORTHO05D004337 3.0e-32 143.7 114 64.0
Sed0024619 Sechium edule HOM05D003750 ORTHO05D004337 3.0e-32 143.7 111 58.6
MBI07_g30204_MAGBIO Magnolia biondii HOM05D003750 ORTHO05D004337 5.1e-32 142.9 108 67.6
arahy.Tifrunner.gnm1.ann1.ZP8MLZ Arachis hypogaea HOM05D003750 ORTHO05D004337 1.5e-31 141.4 107 62.6
Ciclev10032169m.g Citrus clementina HOM05D003750 ORTHO05D004337 2.5e-31 140.6 110 64.5
Lsat_1_v5_gn_4_26620 Lactuca sativa HOM05D003750 ORTHO05D004337 2.5e-31 140.6 112 63.4
unitig_899.g15337 Utricularia gibba HOM05D003750 ORTHO05D004337 4.3e-31 139.8 108 61.1
Nn3g20965 Nelumbo nucifera HOM05D003750 ORTHO05D004337 5.7e-31 139.4 179 49.7
Sed0013297 Sechium edule HOM05D003750 ORTHO05D004337 5.7e-31 139.4 114 58.8
MELO3C014462.2 Cucumis melo HOM05D003750 ORTHO05D004337 1.3e-30 138.3 95 65.3
MBI06_g20684_MAGBIO Magnolia biondii HOM05D003750 ORTHO05D004337 1.3e-30 138.3 110 63.6
Migut.H02092 Erythranthe guttata HOM05D003750 ORTHO05D004337 1.6e-30 137.9 108 62.0
unitig_46.g18277 Utricularia gibba HOM05D003750 ORTHO05D004337 2.8e-30 137.1 108 57.4
Nn6g34390 Nelumbo nucifera HOM05D003750 ORTHO05D004337 4.8e-30 136.3 158 51.9
ATR0737G120 Amborella trichopoda HOM05D003750 ORTHO05D004337 1.1e-29 135.2 112 62.5
DCAR_016898 Daucus carota HOM05D003750 ORTHO05D004337 1.4e-29 134.8 138 52.9
unitig_62.g23108 Utricularia gibba HOM05D003750 ORTHO05D004337 3.1e-29 133.7 155 44.5
DCAR_009794 Daucus carota HOM05D003750 ORTHO05D004337 4.1e-29 133.3 115 59.1
unitig_747.g21612 Utricularia gibba HOM05D003750 ORTHO05D004337 9.0e-29 132.1 180 41.7
AUR62015148 Chenopodium quinoa HOM05D003750 ORTHO05D004337 2.0e-28 131.0 107 59.8
Aqoxy4G00176 Aquilegia oxysepala HOM05D003750 ORTHO05D004337 1.0e-27 128.6 117 59.8
Ah.01g013400 Amaranthus hybridus HOM05D003750 ORTHO05D004337 1.7e-27 127.9 106 56.6
DCAR_021309 Daucus carota HOM05D003750 ORTHO05D004337 3.8e-27 126.7 118 58.5
Ca_06287_v3 Cicer arietinum L. HOM05D003750 ORTHO05D004337 6.5e-27 125.9 96 65.6
PSO541G0678 Papaver somniferum HOM05D003750 ORTHO05D004337 6.5e-27 125.9 117 57.3
EL10Ac9g22858 Beta vulgaris HOM05D003750 ORTHO05D004337 8.5e-27 125.6 107 57.0
Ah.01g001950 Amaranthus hybridus HOM05D003750 ORTHO05D004337 2.5e-26 124.0 109 54.1
HanXRQChr17g0565411 Helianthus annuus HOM05D003750 ORTHO05D004337 2.5e-26 124.0 115 55.7
HanXRQChr17g0565191 Helianthus annuus HOM05D003750 ORTHO05D004337 3.2e-26 123.6 115 55.7
HanXRQChr17g0565441 Helianthus annuus HOM05D003750 ORTHO05D004337 3.2e-26 123.6 115 55.7
HanXRQChr17g0565471 Helianthus annuus HOM05D003750 ORTHO05D004337 3.2e-26 123.6 115 55.7
unitig_85.g27387 Utricularia gibba HOM05D003750 ORTHO05D004337 3.2e-26 123.6 102 57.8
PSO675G0845 Papaver somniferum HOM05D003750 ORTHO05D004337 5.5e-26 122.9 117 56.4
HanXRQChr17g0565481 Helianthus annuus HOM05D003750 ORTHO05D004337 9.3e-26 122.1 111 57.7
CDE09G1130 Ceratophyllum demersum HOM05D003750 ORTHO05D004337 1.2e-25 121.7 108 56.5
Os01g0726700 Oryza sativa ssp. japonica HOM05D003750 ORTHO05D004337 1.6e-25 121.3 109 56.9
Glyma.02G280550 Glycine max HOM05D003750 ORTHO05D004337 7.9e-25 119.0 108 59.3
Eucgr.A01963 Eucalyptus grandis HOM05D003750 ORTHO05D004337 1.3e-24 118.2 160 46.2
HPP92_009096 Vanilla planifolia HOM05D003750 ORTHO05D004337 1.8e-24 117.9 102 58.8
HanXRQChr01g0028591 Helianthus annuus HOM05D003750 ORTHO05D004337 5.1e-24 116.3 110 57.3
Sc15g0002430 Simmondsia chinensis HOM05D003750 ORTHO05D004337 2.5e-23 114.0 110 51.8
ECA234G0795 Erigeron canadensis HOM05D001021 ORTHO05D000894 7.4e-23 112.5 97 60.8
Hund08216 Selenicereus undatus HOM05D003750 ORTHO05D004337 7.4e-23 112.5 114 50.0
Zm00001eb154370 Zea mays HOM05D003750 ORTHO05D004337 2.2e-22 110.9 105 54.3
AUR62017604 Chenopodium quinoa HOM05D003750 ORTHO05D004337 1.8e-21 107.8 88 55.7
CDE02G2915 Ceratophyllum demersum HOM05D003750 ORTHO05D004337 1.5e-20 104.8 110 48.2
Zm00001eb239390 Zea mays HOM05D003750 ORTHO05D004337 1.4e-18 98.2 106 49.1
Zm00001eb278420 Zea mays HOM05D003750 ORTHO05D004337 5.7e-15 86.3 120 44.2
SEGI_25228 Sequoiadendron giganteum HOM05D003750 ORTHO05D004337 4.8e-14 83.2 107 42.1
Zm00001eb120700 Zea mays HOM05D003750 ORTHO05D004337 5.3e-13 79.7 113 44.2
Zm00001eb384740 Zea mays HOM05D003750 ORTHO05D004337 4.5e-12 76.6 103 42.7
Zm00001eb277660 Zea mays HOM05D003750 ORTHO05D004337 5.9e-12 76.3 106 46.2
Os02g0230300 Oryza sativa ssp. japonica HOM05D003750 ORTHO05D004337 2.9e-11 73.9 67 56.7
AagrBONN_evm.TU.Sc2ySwM_228.4867 Anthoceros agrestis HOM05D003750 ORTHO05D004337 1.2e-09 68.6 106 37.7
SEGI_36288 Sequoiadendron giganteum HOM05D007363 ORTHO05D009018 2.1e-09 67.8 109 38.5
SMO367G0707 Selaginella moellendorffii HOM05D007363 ORTHO05D009018 4.7e-09 66.6 87 44.8
Os06g0553200 Oryza sativa ssp. japonica HOM05D003750 ORTHO05D004337 7.9e-09 65.9 108 38.9
Pp3c4_16960 Physcomitrium patens HOM05D003750 ORTHO05D004337 8.8e-08 62.4 72 45.8
SEGI_24140 Sequoiadendron giganteum HOM05D007363 ORTHO05D009018 3.3e-07 60.5 106 33.0
TPR.G40574 Trifolium pratense HOM05D003750 ORTHO05D004337 3.3e-07 60.5 38 57.9
Mapoly0090s0021 Marchantia polymorpha HOM05D021038 ORTHO05D009018 5.7e-07 59.7 101 38.6
SEGI_29869 Sequoiadendron giganteum HOM05D007363 ORTHO05D009018 5.7e-07 59.7 88 36.4
Mapoly0037s0134 Marchantia polymorpha HOM05D007363 ORTHO05D009018 2.2e-06 57.8 103 38.8


User provided reference genes

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