Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1190.22 Capsicum annuum HOM05D006256 ORTHO05D007833 6.7e-58 227.3 125 100.0
PGSC0003DMG400011211 Solanum tuberosum HOM05D006256 ORTHO05D007833 2.2e-40 169.1 129 78.3
Sopen07g002140 Solanum pennellii HOM05D006256 ORTHO05D007833 1.1e-39 166.8 129 77.5
Solyc07g006000.3 Solanum lycopersicum HOM05D006256 ORTHO05D007833 1.4e-39 166.4 129 76.7
Peaxi162Scf00563g00414 Petunia axillaris HOM05D006256 ORTHO05D007833 1.5e-33 146.4 129 70.5
Nitab4.5_0001036g0150 Nicotiana tabacum HOM05D006256 ORTHO05D007833 2.6e-33 145.6 129 69.0
Nitab4.5_0006744g0050 Nicotiana tabacum HOM05D006256 ORTHO05D007833 2.8e-32 142.1 129 67.4
Cc06_g14490 Coffea canephora HOM05D006256 ORTHO05D007833 1.2e-19 100.1 101 62.4
HanXRQChr12g0357751 Helianthus annuus HOM05D006256 ORTHO05D007833 2.1e-19 99.4 117 55.6
MSTRG.10713 Avicennia marina HOM05D006256 ORTHO05D007833 2.8e-19 99.0 120 56.7
Oeu010284.1 Olea europaea HOM05D006256 ORTHO05D007833 2.8e-19 99.0 128 53.1
Aqoxy7G03320 Aquilegia oxysepala HOM05D006256 ORTHO05D007833 1.4e-18 96.7 116 53.4
CSS0035436 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 3.1e-18 95.5 120 55.0
Lsat_1_v5_gn_5_88481 Lactuca sativa HOM05D006256 ORTHO05D007833 5.2e-18 94.7 125 53.6
MBI15_g35737_MAGBIO Magnolia biondii HOM05D006256 ORTHO05D007833 5.2e-18 94.7 126 50.0
Actinidia38660 Actinidia chinensis HOM05D006256 ORTHO05D007833 6.8e-18 94.4 125 53.6
HanXRQChr10g0307761 Helianthus annuus HOM05D006256 ORTHO05D007833 6.8e-18 94.4 102 58.8
SGA_v2.0_scaffold222G42778 Striga asiatica HOM05D006256 ORTHO05D007833 8.9e-18 94.0 121 55.4
vmacro06052 Vaccinium macrocarpon HOM05D006256 ORTHO05D007833 1.5e-17 93.2 129 49.6
Migut.K00301 Erythranthe guttata HOM05D006256 ORTHO05D007833 2.0e-17 92.8 124 51.6
CDE02G1547 Ceratophyllum demersum HOM05D006256 ORTHO05D007833 2.6e-17 92.4 126 53.2
SalBow1G2070 Salvia bowleyana HOM05D006256 ORTHO05D007833 2.6e-17 92.4 126 50.8
TAR383G0166 Trochodendron aralioides HOM05D006256 ORTHO05D007833 3.4e-17 92.0 98 58.2
ATR0580G126 Amborella trichopoda HOM05D006256 ORTHO05D007833 5.8e-17 91.3 91 63.7
Nn2g12458 Nelumbo nucifera HOM05D006256 ORTHO05D007833 5.8e-17 91.3 102 60.8
PSO063G2398 Papaver somniferum HOM05D006256 ORTHO05D007833 5.8e-17 91.3 96 60.4
Hma1.2p1_1084F.1_g255300 Hydrangea macrophylla HOM05D006256 ORTHO05D007833 7.5e-17 90.9 126 51.6
unitig_748.g7194 Utricularia gibba HOM05D006256 ORTHO05D007833 7.5e-17 90.9 129 51.2
CDE05G2121 Ceratophyllum demersum HOM05D006256 ORTHO05D007833 9.8e-17 90.5 126 51.6
Dinv42817 Davidia involucrata HOM05D006256 ORTHO05D007833 9.8e-17 90.5 126 53.2
Dinv43283 Davidia involucrata HOM05D006256 ORTHO05D007833 9.8e-17 90.5 126 53.2
VMungo1215G1943 Vigna mungo HOM05D006256 ORTHO05D007833 9.8e-17 90.5 99 57.6
Phvul.003G153700 Phaseolus vulgaris HOM05D006256 ORTHO05D007833 1.3e-16 90.1 99 56.6
Thecc.09G154100 Theobroma cacao HOM05D006256 ORTHO05D007833 1.3e-16 90.1 98 61.2
TAR626G0939 Trochodendron aralioides HOM05D006256 ORTHO05D007833 1.3e-16 90.1 96 59.4
Glyma.02G206700 Glycine max HOM05D006256 ORTHO05D007833 1.7e-16 89.7 98 58.2
PSO170G3639 Papaver somniferum HOM05D006256 ORTHO05D007833 1.7e-16 89.7 123 52.0
ECA234G3762 Erigeron canadensis HOM05D006256 ORTHO05D007833 2.2e-16 89.4 125 48.0
Gohir.D08G098900 Gossypium hirsutum HOM05D006256 ORTHO05D007833 2.2e-16 89.4 98 60.2
Glyma.17G071200 Glycine max HOM05D006256 ORTHO05D007833 2.9e-16 89.0 106 54.7
AUR62028378 Chenopodium quinoa HOM05D006256 ORTHO05D007833 3.7e-16 88.6 136 50.0
Gohir.A08G087800 Gossypium hirsutum HOM05D006256 ORTHO05D007833 3.7e-16 88.6 86 65.1
Migut.J01392 Erythranthe guttata HOM05D006256 ORTHO05D007833 4.9e-16 88.2 86 64.0
Gorai.004G106500 Gossypium raimondii HOM05D006256 ORTHO05D007833 4.9e-16 88.2 98 60.2
CsaV3_1G029200 Cucumis sativus L. HOM05D006256 ORTHO05D007833 6.4e-16 87.8 98 61.2
Lj4g0007171 Lotus japonicus HOM05D006256 ORTHO05D007833 6.4e-16 87.8 122 53.3
Manes.14G113600 Manihot esculenta HOM05D006256 ORTHO05D007833 6.4e-16 87.8 122 54.9
RcHm_v2.0_Chr4g0405501 Rosa chinensis HOM05D006256 ORTHO05D007833 1.1e-15 87.0 118 50.8
AUR62025373 Chenopodium quinoa HOM05D006256 ORTHO05D007833 1.4e-15 86.7 136 48.5
COL.COLO4_05401 Corchorus olitorius HOM05D006256 ORTHO05D007833 1.4e-15 86.7 110 56.4
MELO3C010199.2 Cucumis melo HOM05D006256 ORTHO05D007833 1.9e-15 86.3 98 59.2
Atru.chr7.353 Acer truncatum HOM05D006256 ORTHO05D007833 2.4e-15 85.9 121 53.7
FAN07G0991 Fragaria x ananassa HOM05D006256 ORTHO05D007833 4.1e-15 85.1 98 55.1
Potri.018G102700 Populus trichocarpa HOM05D006256 ORTHO05D007833 4.1e-15 85.1 120 55.0
PGR102G0560 Punica granatum HOM05D006256 ORTHO05D007833 5.4e-15 84.7 135 51.9
CiPaw.16G106600 Carya illinoinensis HOM05D006256 ORTHO05D007833 7.0e-15 84.3 97 58.8
ClCG06G012650 Citrullus lanatus HOM05D006256 ORTHO05D007833 7.0e-15 84.3 98 58.2
Actinidia33300 Actinidia chinensis HOM05D006256 ORTHO05D007833 9.2e-15 84.0 136 47.8
arahy.Tifrunner.gnm1.ann1.RJ4A7B Arachis hypogaea HOM05D006256 ORTHO05D007833 9.2e-15 84.0 122 54.9
Duzib187G1001 Durio zibethinus HOM05D006256 ORTHO05D007833 9.2e-15 84.0 98 59.2
FvH4_4g09690 Fragaria vesca HOM05D006256 ORTHO05D007833 9.2e-15 84.0 115 50.4
Prupe.1G102100 Prunus persica HOM05D006256 ORTHO05D007833 9.2e-15 84.0 97 55.7
Sabra18G0088200 Salix brachista HOM05D006256 ORTHO05D007833 9.2e-15 84.0 97 56.7
Ah.09g228670 Amaranthus hybridus HOM05D006256 ORTHO05D007833 1.2e-14 83.6 119 52.1
arahy.Tifrunner.gnm1.ann1.6DRS7R Arachis hypogaea HOM05D006256 ORTHO05D007833 1.2e-14 83.6 122 54.9
Carub.0004s0326 Capsella rubella HOM05D006256 ORTHO05D007833 1.2e-14 83.6 100 55.0
Ciclev10009792m.g Citrus clementina HOM05D006256 ORTHO05D007833 1.2e-14 83.6 88 61.4
C08p39560 Brassica napus HOM05D006256 ORTHO05D007833 1.6e-14 83.2 114 52.6
BolC8t51529H Brassica oleracea HOM05D006256 ORTHO05D007833 1.6e-14 83.2 114 52.6
CANSAT11G0095 Cannabis sativa HOM05D006256 ORTHO05D007833 1.6e-14 83.2 120 52.5
Os06g0647100 Oryza sativa ssp. japonica HOM05D006256 ORTHO05D007833 1.6e-14 83.2 60 70.0
Aa31LG7G12680 Aethionema arabicum HOM05D006256 ORTHO05D007833 2.1e-14 82.8 128 50.8
Cpa.g.sc199.16 Carica papaya HOM05D006256 ORTHO05D007833 2.1e-14 82.8 89 62.9
Eucgr.C02515 Eucalyptus grandis HOM05D006256 ORTHO05D007833 3.5e-14 82.0 126 52.4
Medtr4g130300 Medicago truncatula HOM05D006256 ORTHO05D007833 3.5e-14 82.0 125 48.8
Eucgr.L01548 Eucalyptus grandis HOM05D006256 ORTHO05D007833 4.6e-14 81.6 117 54.7
FAN17G2907 Fragaria x ananassa HOM05D006256 ORTHO05D007833 4.6e-14 81.6 115 50.4
FAN17G2911 Fragaria x ananassa HOM05D006256 ORTHO05D007833 4.6e-14 81.6 115 50.4
FAN22G0392 Fragaria x ananassa HOM05D006256 ORTHO05D007833 4.6e-14 81.6 115 50.4
Haze_19139 Corylus avellana HOM05D006256 ORTHO05D007833 6.0e-14 81.3 109 54.1
AT2G24090 Arabidopsis thaliana HOM05D006256 ORTHO05D007833 7.8e-14 80.9 100 56.0
CSS0023303 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 7.8e-14 80.9 58 77.6
Sed0025015 Sechium edule HOM05D006256 ORTHO05D007833 7.8e-14 80.9 126 53.2
A09p56610 Brassica napus HOM05D006256 ORTHO05D007833 1.0e-13 80.5 117 52.1
BraA09t41052Z Brassica rapa HOM05D006256 ORTHO05D007833 1.0e-13 80.5 117 52.1
CiPaw.15G164300 Carya illinoinensis HOM05D006256 ORTHO05D007833 1.0e-13 80.5 109 52.3
A04p18400 Brassica napus HOM05D006256 ORTHO05D007833 1.3e-13 80.1 116 48.3
BraA04t17452Z Brassica rapa HOM05D006256 ORTHO05D007833 1.3e-13 80.1 116 48.3
Cfa020783 Carpinus fangiana HOM05D006256 ORTHO05D007833 1.3e-13 80.1 127 49.6
Lalb_Chr13g0300681 Lupinus albus HOM05D006256 ORTHO05D007833 1.3e-13 80.1 110 52.7
TWI32G1056 Tripterygium wilfordii HOM05D006256 ORTHO05D007833 1.3e-13 80.1 116 53.4
HPP92_010352 Vanilla planifolia HOM05D006256 ORTHO05D007833 1.7e-13 79.7 87 59.8
Zm00001eb386680 Zea mays HOM05D006256 ORTHO05D007833 1.7e-13 79.7 49 85.7
SEGI_40166 Sequoiadendron giganteum HOM05D006256 ORTHO05D007833 2.3e-13 79.3 104 51.0
EL10Ac8g18906 Beta vulgaris HOM05D006256 ORTHO05D007833 3.0e-13 79.0 130 49.2
C04p53670 Brassica napus HOM05D006256 ORTHO05D007833 3.0e-13 79.0 116 48.3
BolC4t26923H Brassica oleracea HOM05D006256 ORTHO05D007833 3.0e-13 79.0 116 48.3
CARHR118260 Cardamine hirsuta HOM05D006256 ORTHO05D007833 3.0e-13 79.0 103 53.4
BcaC07g40961 Brassica carinata HOM05D006256 ORTHO05D007833 3.9e-13 78.6 114 50.0
AL4G14180 Arabidopsis lyrata HOM05D006256 ORTHO05D007833 5.1e-13 78.2 100 53.0
Thhalv10000362m.g Eutrema salsugineum HOM05D006256 ORTHO05D007833 1.1e-12 77.0 117 51.3
QL02p094215 Quercus lobata HOM05D006256 ORTHO05D007833 1.1e-12 77.0 110 50.9
TPR.G24835 Trifolium pratense HOM05D006256 ORTHO05D007833 1.1e-12 77.0 128 45.3
Sp4g02990 Schrenkiella parvula HOM05D006256 ORTHO05D007833 1.5e-12 76.6 117 50.4
Hund08959 Selenicereus undatus HOM05D006256 ORTHO05D007833 3.3e-12 75.5 47 85.1
MD04G1052200 Malus domestica HOM05D006256 ORTHO05D007833 4.3e-12 75.1 100 51.0
Psat7g006560 Pisum sativum HOM05D006256 ORTHO05D007833 4.3e-12 75.1 127 48.0
Gohir.A04G058552 Gossypium hirsutum HOM05D006256 ORTHO05D007833 9.5e-12 73.9 77 58.4
CBR_g46223 Chara braunii HOM05D006256 ORTHO05D007833 1.6e-11 73.2 46 80.4
THA.LOC104803911 Tarenaya hassleriana HOM05D006256 ORTHO05D007833 2.8e-11 72.4 95 54.7
Pp3c22_13420 Physcomitrium patens HOM05D006256 ORTHO05D007833 1.4e-10 70.1 99 49.5
MBI15_g42789_MAGBIO Magnolia biondii HOM05D006256 ORTHO05D007833 1.8e-10 69.7 86 51.2
GSVIVG01012561001 Vitis vinifera HOM05D006256 ORTHO05D007833 4.0e-10 68.6 43 83.7
GSVIVG01012574001 Vitis vinifera HOM05D006256 ORTHO05D007833 4.0e-10 68.6 43 83.7
Pp3c21_8670 Physcomitrium patens HOM05D004684 ORTHO05D006904 6.8e-10 67.8 93 51.6
SMO164G0197 Selaginella moellendorffii HOM05D006256 ORTHO05D007833 4.4e-09 65.1 106 47.2
CSS0026373 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 1.7e-08 63.2 105 43.8
Rhsim03G0259400 Rhododendron simsii HOM05D006256 ORTHO05D007833 1.7e-08 63.2 40 80.0
SGA_v2.0_scaffold12G06024 Striga asiatica HOM05D006256 ORTHO05D007833 1.9e-07 59.7 102 43.1
Mapoly0027s0042 Marchantia polymorpha HOM05D006256 ORTHO05D007833 2.4e-07 59.3 122 41.0
Zm00001eb000270 Zea mays HOM05D006256 ORTHO05D007833 3.2e-07 58.9 47 74.5


User provided reference genes

Program Settings