Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1190.14 Capsicum annuum HOM05D005808 ORTHO05D006196 2.3e-99 365.5 178 100.0
CAN.G1190.16 Capsicum annuum HOM05D005808 ORTHO05D006196 3.4e-39 165.6 98 84.7
Solyc07g006070.1 Solanum lycopersicum HOM05D005808 ORTHO05D006196 7.6e-39 164.5 98 83.7
Sopen07g002190 Solanum pennellii HOM05D005808 ORTHO05D006196 7.6e-39 164.5 98 83.7
PGSC0003DMG400011158 Solanum tuberosum HOM05D005808 ORTHO05D006196 7.6e-39 164.5 98 83.7
Peaxi162Scf00038g00063 Petunia axillaris HOM05D005808 ORTHO05D006196 3.8e-38 162.2 98 83.7
Nitab4.5_0001036g0010 Nicotiana tabacum HOM05D005808 ORTHO05D006196 4.9e-38 161.8 98 80.6
Nitab4.5_0002809g0070 Nicotiana tabacum HOM05D005808 ORTHO05D006196 1.1e-37 160.6 98 79.6
Migut.J01400 Erythranthe guttata HOM05D005808 ORTHO05D006196 9.3e-37 157.5 98 78.6
unitig_748.g7192 Utricularia gibba HOM05D005808 ORTHO05D006196 2.1e-36 156.4 98 79.6
SGA_v2.0_scaffold265G46071 Striga asiatica HOM05D005808 ORTHO05D006196 3.5e-36 155.6 98 78.6
SGA_v2.0_scaffold45G17002 Striga asiatica HOM05D005808 ORTHO05D006196 4.6e-36 155.2 98 79.6
HanXRQChr06g0170251 Helianthus annuus HOM05D005808 ORTHO05D006196 6.0e-36 154.8 98 78.6
Oeu031860.1 Olea europaea HOM05D005808 ORTHO05D006196 6.0e-36 154.8 98 77.6
MSTRG.6169 Avicennia marina HOM05D005808 ORTHO05D006196 7.9e-36 154.5 98 78.6
ECA233G5554 Erigeron canadensis HOM05D005808 ORTHO05D006196 7.9e-36 154.5 98 77.6
Potri.018G101700 Populus trichocarpa HOM05D005808 ORTHO05D006196 7.9e-36 154.5 98 77.6
CiPaw.15G163400 Carya illinoinensis HOM05D005808 ORTHO05D006196 1.0e-35 154.1 98 77.6
HanXRQChr15g0468821 Helianthus annuus HOM05D005808 ORTHO05D006196 1.0e-35 154.1 104 76.0
ClCG02G014280 Citrullus lanatus HOM05D005808 ORTHO05D006196 1.3e-35 153.7 98 77.6
Potri.006G179100 Populus trichocarpa HOM05D005808 ORTHO05D006196 1.3e-35 153.7 98 75.5
Sed0021443 Sechium edule HOM05D005808 ORTHO05D006196 1.3e-35 153.7 98 78.6
Cc06_g14220 Coffea canephora HOM05D005808 ORTHO05D006196 1.8e-35 153.3 98 79.6
Hma1.2p1_0284F.1_g113760 Hydrangea macrophylla HOM05D005808 ORTHO05D006196 1.8e-35 153.3 98 77.6
Sabra18G0087400 Salix brachista HOM05D005808 ORTHO05D006196 1.8e-35 153.3 98 76.5
CANSAT11G2252 Cannabis sativa HOM05D005808 ORTHO05D006196 2.3e-35 152.9 98 76.5
Lj9A723T41 Lonicera japonica HOM05D005808 ORTHO05D006196 2.3e-35 152.9 98 76.5
Prupe.1G100900 Prunus persica HOM05D005808 ORTHO05D006196 3.0e-35 152.5 98 77.6
C06p47390 Brassica napus HOM05D005808 ORTHO05D006196 3.9e-35 152.1 98 76.5
BolC6t39778H Brassica oleracea HOM05D005808 ORTHO05D006196 3.9e-35 152.1 98 76.5
CSS0038851 Camellia sinensis var. sinensis HOM05D005808 ORTHO05D006196 3.9e-35 152.1 98 76.5
CARHR066260 Cardamine hirsuta HOM05D005808 ORTHO05D006196 5.1e-35 151.8 98 76.5
Manes.04G001000 Manihot esculenta HOM05D005808 ORTHO05D006196 5.1e-35 151.8 98 76.5
MELO3C004113.2 Cucumis melo HOM05D005808 ORTHO05D006196 6.7e-35 151.4 98 76.5
CsaV3_2G007730 Cucumis sativus L. HOM05D005808 ORTHO05D006196 6.7e-35 151.4 98 76.5
DCAR_024732 Daucus carota HOM05D005808 ORTHO05D006196 6.7e-35 151.4 98 77.6
FAN17G0928 Fragaria x ananassa HOM05D005808 ORTHO05D006196 6.7e-35 151.4 98 77.6
Gorai.009G008600 Gossypium raimondii HOM05D005808 ORTHO05D006196 6.7e-35 151.4 98 77.6
Lsat_1_v5_gn_5_72880 Lactuca sativa HOM05D005808 ORTHO05D006196 6.7e-35 151.4 98 76.5
CARHR018500 Cardamine hirsuta HOM05D005808 ORTHO05D006196 8.7e-35 151.0 99 74.7
Gohir.A05G007600 Gossypium hirsutum HOM05D005808 ORTHO05D006196 8.7e-35 151.0 98 76.5
AL2G33020 Arabidopsis lyrata HOM05D005808 ORTHO05D006196 1.1e-34 150.6 98 75.5
A06p13950 Brassica napus HOM05D005808 ORTHO05D006196 1.1e-34 150.6 98 76.5
RcHm_v2.0_Chr4g0405311 Rosa chinensis HOM05D005808 ORTHO05D006196 1.1e-34 150.6 98 76.5
Sp5g28220 Schrenkiella parvula HOM05D005808 ORTHO05D006196 1.1e-34 150.6 98 75.5
Aa31LG7G2700 Aethionema arabicum HOM05D005808 ORTHO05D006196 1.5e-34 150.2 98 75.5
AL1G30250 Arabidopsis lyrata HOM05D005808 ORTHO05D006196 1.5e-34 150.2 98 75.5
AT1G17890 Arabidopsis thaliana HOM05D005808 ORTHO05D006196 1.5e-34 150.2 98 75.5
CiPaw.16G105900 Carya illinoinensis HOM05D005808 ORTHO05D006196 1.5e-34 150.2 98 75.5
Ciclev10008917m.g Citrus clementina HOM05D005808 ORTHO05D006196 1.5e-34 150.2 98 74.5
Eucgr.C01236 Eucalyptus grandis HOM05D005808 ORTHO05D006196 1.5e-34 150.2 98 76.5
Gohir.D05G008500 Gossypium hirsutum HOM05D005808 ORTHO05D006196 1.5e-34 150.2 98 76.5
Lalb_Chr19g0124141 Lupinus albus HOM05D005808 ORTHO05D006196 1.5e-34 150.2 98 74.5
Psat0s2845g0200 Pisum sativum HOM05D005808 ORTHO05D006196 1.5e-34 150.2 98 74.5
Sed0024595 Sechium edule HOM05D005808 ORTHO05D006196 1.5e-34 150.2 98 75.5
EL10Ac8g18896 Beta vulgaris HOM05D005808 ORTHO05D006196 1.9e-34 149.8 123 62.6
BcaB03g15037 Brassica carinata HOM05D005808 ORTHO05D006196 1.9e-34 149.8 97 77.3
A07p39200 Brassica napus HOM05D005808 ORTHO05D006196 1.9e-34 149.8 98 75.5
BraA07t31469Z Brassica rapa HOM05D005808 ORTHO05D006196 1.9e-34 149.8 98 75.5
Dinv42808 Davidia involucrata HOM05D005808 ORTHO05D006196 1.9e-34 149.8 98 76.5
Dinv43293 Davidia involucrata HOM05D005808 ORTHO05D006196 1.9e-34 149.8 98 76.5
PSO063G5527 Papaver somniferum HOM05D005808 ORTHO05D006196 1.9e-34 149.8 98 74.5
AT1G73250 Arabidopsis thaliana HOM05D005808 ORTHO05D006196 2.5e-34 149.4 98 74.5
PGR102G1617 Punica granatum HOM05D005808 ORTHO05D006196 2.5e-34 149.4 98 76.5
Thecc.09G155400 Theobroma cacao HOM05D005808 ORTHO05D006196 2.5e-34 149.4 98 75.5
BcaB07g34013 Brassica carinata HOM05D005808 ORTHO05D006196 3.3e-34 149.1 98 75.5
C05p16270 Brassica napus HOM05D005808 ORTHO05D006196 3.3e-34 149.1 98 75.5
BolC5t30329H Brassica oleracea HOM05D005808 ORTHO05D006196 3.3e-34 149.1 98 75.5
Ca_07714_v3 Cicer arietinum L. HOM05D005808 ORTHO05D006196 3.3e-34 149.1 98 73.5
FvH4_4g08850 Fragaria vesca HOM05D005808 ORTHO05D006196 3.3e-34 149.1 98 76.5
FAN12G3030 Fragaria x ananassa HOM05D005808 ORTHO05D006196 3.3e-34 149.1 98 76.5
Lj1g0001762 Lotus japonicus HOM05D005808 ORTHO05D006196 3.3e-34 149.1 98 74.5
Sp1g15980 Schrenkiella parvula HOM05D005808 ORTHO05D006196 3.3e-34 149.1 98 75.5
arahy.Tifrunner.gnm1.ann1.9Q453L Arachis hypogaea HOM05D005808 ORTHO05D006196 4.3e-34 148.7 99 72.7
arahy.Tifrunner.gnm1.ann1.R51DI5 Arachis hypogaea HOM05D005808 ORTHO05D006196 4.3e-34 148.7 99 72.7
Thhalv10008184m.g Eutrema salsugineum HOM05D005808 ORTHO05D006196 4.3e-34 148.7 98 75.5
Glyma.09G280100 Glycine max HOM05D005808 ORTHO05D006196 4.3e-34 148.7 98 74.5
Glyma.18G208900 Glycine max HOM05D005808 ORTHO05D006196 4.3e-34 148.7 98 74.5
Lj6g0026768 Lotus japonicus HOM05D005808 ORTHO05D006196 4.3e-34 148.7 98 73.5
Aqoxy7G03270 Aquilegia oxysepala HOM05D005808 ORTHO05D006196 5.7e-34 148.3 98 73.5
Medtr7g108490 Medicago truncatula HOM05D005808 ORTHO05D006196 5.7e-34 148.3 98 73.5
AUR62025384 Chenopodium quinoa HOM05D005808 ORTHO05D006196 7.4e-34 147.9 123 62.6
Duzib168G1041 Durio zibethinus HOM05D005808 ORTHO05D006196 7.4e-34 147.9 98 74.5
Nn5g27515 Nelumbo nucifera HOM05D005808 ORTHO05D006196 7.4e-34 147.9 98 75.5
Phvul.008G090200 Phaseolus vulgaris HOM05D005808 ORTHO05D006196 7.4e-34 147.9 98 73.5
TWI34G0184 Tripterygium wilfordii HOM05D005808 ORTHO05D006196 7.4e-34 147.9 98 74.5
TAR626G1850 Trochodendron aralioides HOM05D005808 ORTHO05D006196 7.4e-34 147.9 98 74.5
MD05G1099800 Malus domestica HOM05D005808 ORTHO05D006196 9.7e-34 147.5 98 74.5
MD10G1105500 Malus domestica HOM05D005808 ORTHO05D006196 9.7e-34 147.5 98 73.5
Os06g0652400 Oryza sativa ssp. japonica HOM05D005808 ORTHO05D006196 9.7e-34 147.5 98 72.4
PSO782G2734 Papaver somniferum HOM05D005808 ORTHO05D006196 9.7e-34 147.5 98 73.5
Zm00001eb388990 Zea mays HOM05D005808 ORTHO05D006196 9.7e-34 147.5 99 71.7
AUR62028366 Chenopodium quinoa HOM05D005808 ORTHO05D006196 1.3e-33 147.1 123 62.6
THA.LOC104812192 Tarenaya hassleriana HOM05D005808 ORTHO05D006196 1.3e-33 147.1 98 74.5
Thhalv10018855m.g Eutrema salsugineum HOM05D005808 ORTHO05D006196 1.6e-33 146.7 98 73.5
QL02p094407 Quercus lobata HOM05D005808 ORTHO05D006196 1.6e-33 146.7 98 73.5
TPR.G18676 Trifolium pratense HOM05D005808 ORTHO05D006196 1.6e-33 146.7 98 73.5
BcaC07g38879 Brassica carinata HOM05D000226 ORTHO05D006196 2.2e-33 146.4 98 74.5
C08p18240 Brassica napus HOM05D002264 ORTHO05D006196 2.2e-33 146.4 99 72.7
VMungo1383G1013 Vigna mungo HOM05D005808 ORTHO05D006196 2.2e-33 146.4 98 73.5
Carub.0001s1762 Capsella rubella HOM05D005808 ORTHO05D006196 3.7e-33 145.6 98 74.5
ATR0332G026 Amborella trichopoda HOM05D005808 ORTHO05D006196 4.8e-33 145.2 98 74.5
MBI14_g16421_MAGBIO Magnolia biondii HOM05D005808 ORTHO05D006196 4.8e-33 145.2 98 72.4
Pp3c10_6390 Physcomitrium patens HOM05D005808 ORTHO05D006196 4.8e-33 145.2 98 72.4
Haze_19066 Corylus avellana HOM05D005808 ORTHO05D006196 1.1e-32 144.1 98 72.4
Haze_19072 Corylus avellana HOM05D005808 ORTHO05D006196 1.1e-32 144.1 98 72.4
Sc18g0003190 Simmondsia chinensis HOM05D005808 ORTHO05D006196 1.1e-32 144.1 98 72.4
SEGI_01162 Sequoiadendron giganteum HOM05D005808 ORTHO05D006196 1.4e-32 143.7 98 71.4
SMO143G0303 Selaginella moellendorffii HOM05D005808 ORTHO05D006196 1.8e-32 143.3 98 69.4
CDE11G1052 Ceratophyllum demersum HOM05D005808 ORTHO05D006196 4.1e-32 142.1 98 71.4
GSVIVG01023706001 Vitis vinifera HOM05D005808 ORTHO05D006196 4.1e-32 142.1 97 73.2
Atru.chr7.401 Acer truncatum HOM05D005808 ORTHO05D006196 5.3e-32 141.7 98 71.4
Rhsim01G0021100 Rhododendron simsii HOM05D000821 ORTHO05D006196 9.0e-32 141.0 98 72.4
TAR383G0114 Trochodendron aralioides HOM05D005808 ORTHO05D006196 1.2e-31 140.6 98 71.4
SHI02828 Sapria himalayana HOM05D005808 ORTHO05D006196 5.9e-31 138.3 98 69.4
Mapoly0064s0048 Marchantia polymorpha HOM05D005808 ORTHO05D006196 7.6e-31 137.9 98 63.3
AagrBONN_evm.TU.Sc2ySwM_228.3310 Anthoceros agrestis HOM05D005808 ORTHO05D006196 2.2e-30 136.3 98 67.3
CBR_g8654 Chara braunii HOM05D005808 ORTHO05D006196 8.5e-30 134.4 98 65.3
CDE11G1252 Ceratophyllum demersum HOM05D006557 ORTHO05D008177 7.9e-28 127.9 95 68.4
Lj9C724T6 Lonicera japonica HOM05D005808 ORTHO05D006196 1.0e-27 127.5 98 67.3
SalBow6G0126 Salvia bowleyana HOM05D005808 ORTHO05D006196 2.2e-25 119.8 65 86.2
BcaC08g46743 Brassica carinata HOM05D005808 ORTHO05D006196 3.7e-25 119.0 98 64.3
Actinidia12360 Actinidia chinensis HOM05D005808 ORTHO05D006196 2.0e-23 113.2 66 81.8
Os06g0652300 Oryza sativa ssp. japonica HOM05D005808 ORTHO05D006196 1.3e-22 110.5 97 56.7
CARHR247960 Cardamine hirsuta HOM05D005808 ORTHO05D006196 2.0e-18 96.7 84 60.7
BraA06t24535Z Brassica rapa HOM05D002264 ORTHO05D002413 1.1e-16 90.9 67 70.1
A08p30670 Brassica napus HOM05D002264 ORTHO05D002413 5.9e-15 85.1 66 65.2
CAN.G1190.15 Capsicum annuum HOM05D005808 ORTHO05D006196 3.8e-14 82.4 53 77.4
Actinidia25650 Actinidia chinensis HOM05D005808 ORTHO05D006196 2.7e-12 76.3 58 72.4
Cpa.g.sc43.20 Carica papaya HOM05D005808 ORTHO05D006196 1.4e-11 73.9 44 75.0
Oeu024899.1 Olea europaea HOM05D005808 ORTHO05D006196 1.8e-11 73.6 59 66.1
MCO16G228 Micromonas commoda HOM05D005808 ORTHO05D006196 2.0e-10 70.1 81 42.0
Dinv41330 Davidia involucrata HOM05D005808 ORTHO05D006196 9.7e-10 67.8 140 34.3
HPP92_020611 Vanilla planifolia HOM05D000318 ORTHO05D006196 1.3e-09 67.4 62 56.5
Rhsim01G0021500 Rhododendron simsii HOM05D000432 ORTHO05D000320 2.4e-08 63.2 41 75.6
Actinidia24963 Actinidia chinensis HOM05D005808 ORTHO05D006196 5.0e-06 55.5 46 65.2


User provided reference genes

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