Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1186.47 Capsicum annuum HOM05D007952 ORTHO05D009823 6.9e-33 143.3 67 100.0
arahy.Tifrunner.gnm1.ann1.RE2PS1 Arachis hypogaea HOM05D007952 ORTHO05D009823 2.1e-18 95.1 56 80.4
BolSC44t60812H Brassica oleracea HOM05D007952 ORTHO05D009823 2.1e-18 95.1 56 80.4
Lsat_1_v5_gn_4_63021 Lactuca sativa HOM05D007952 ORTHO05D009823 2.1e-18 95.1 56 80.4
Lsat_1_v5_gn_4_99801 Lactuca sativa HOM05D007952 ORTHO05D009823 2.1e-18 95.1 56 80.4
PGSC0003DMG400028997 Solanum tuberosum HOM05D007952 ORTHO05D009823 2.1e-18 95.1 56 80.4
PGSC0003DMG400035391 Solanum tuberosum HOM05D007952 ORTHO05D009823 2.1e-18 95.1 56 80.4
arahy.Tifrunner.gnm1.ann1.TT5YJH Arachis hypogaea HOM05D007952 ORTHO05D009823 6.2e-18 93.6 56 78.6
ECA247G0757 Erigeron canadensis HOM05D000006 ORTHO05D000001 6.2e-18 93.6 56 78.6
Oeu020621.1 Olea europaea HOM05D007952 ORTHO05D009823 3.1e-17 91.3 56 76.8
DCAR_004958 Daucus carota HOM05D007952 ORTHO05D009823 6.9e-17 90.1 52 82.7
Lj1g0013448 Lotus japonicus HOM05D007952 ORTHO05D009823 1.2e-16 89.4 64 70.3
Sc01g0006530 Simmondsia chinensis HOM05D007952 ORTHO05D009823 1.2e-16 89.4 56 76.8
Medtr3g035635 Medicago truncatula HOM05D007952 ORTHO05D009823 2.0e-16 88.6 60 73.3
Medtr4g006040 Medicago truncatula HOM05D008037 ORTHO05D009823 2.0e-16 88.6 60 73.3
arahy.Tifrunner.gnm1.ann1.GIFH8E Arachis hypogaea HOM05D007952 ORTHO05D009823 2.6e-16 88.2 56 76.8
Nn5g29057 Nelumbo nucifera HOM05D007952 ORTHO05D009823 4.5e-16 87.4 56 76.8
Sc04g0003580 Simmondsia chinensis HOM05D007952 ORTHO05D009823 7.6e-16 86.7 56 71.4
Medtr0002s0270 Medicago truncatula HOM05D007952 ORTHO05D009823 9.9e-16 86.3 56 73.2
Atru.chr13.2454 Acer truncatum HOM05D007952 ORTHO05D009823 2.2e-15 85.1 75 60.0
arahy.Tifrunner.gnm1.ann1.0845WK Arachis hypogaea HOM05D007952 ORTHO05D009823 2.2e-15 85.1 75 60.0
arahy.Tifrunner.gnm1.ann1.88RRM9 Arachis hypogaea HOM05D007952 ORTHO05D009823 2.2e-15 85.1 75 60.0
arahy.Tifrunner.gnm1.ann1.PHD7EH Arachis hypogaea HOM05D007952 ORTHO05D009823 8.4e-15 83.2 56 69.6
arahy.Tifrunner.gnm1.ann1.XUIM66 Arachis hypogaea HOM05D007952 ORTHO05D009823 8.4e-15 83.2 78 56.4
Lj4g0016112 Lotus japonicus HOM05D007952 ORTHO05D009823 8.4e-15 83.2 69 63.8
arahy.Tifrunner.gnm1.ann1.HDQ4NC Arachis hypogaea HOM05D007952 ORTHO05D009823 1.9e-14 82.0 75 58.7
ECA246G1432 Erigeron canadensis HOM05D007952 ORTHO05D009823 3.2e-14 81.3 56 73.2
Nn029s41587 Nelumbo nucifera HOM05D007952 ORTHO05D009823 4.2e-14 80.9 80 55.0
Nn064s42224 Nelumbo nucifera HOM05D007952 ORTHO05D009823 4.2e-14 80.9 80 55.0
Nn206s45068 Nelumbo nucifera HOM05D007952 ORTHO05D009823 4.2e-14 80.9 80 55.0
Nn219s45283 Nelumbo nucifera HOM05D007952 ORTHO05D009823 4.2e-14 80.9 80 55.0
CSS0039937 Camellia sinensis var. sinensis HOM05D007952 ORTHO05D009823 1.6e-13 79.0 70 60.0
Sopen11g014330 Solanum pennellii HOM05D000743 ORTHO05D000580 2.7e-13 78.2 52 75.0
EL10Ac6g15366 Beta vulgaris HOM05D007952 ORTHO05D009823 4.6e-13 77.4 50 74.0
Ca_02733_v3 Cicer arietinum L. HOM05D008016 ORTHO05D009823 4.6e-13 77.4 56 69.6
CAN.G262.4 Capsicum annuum HOM05D007952 ORTHO05D009823 6.0e-13 77.0 47 74.5
arahy.Tifrunner.gnm1.ann1.J5KLX8 Arachis hypogaea HOM05D007952 ORTHO05D009823 1.1e-09 66.2 74 52.7
Psat0ss8367g0160 Pisum sativum HOM05D001387 ORTHO05D001250 1.8e-09 65.5 53 60.4
Sc21g0004590 Simmondsia chinensis HOM05D007952 ORTHO05D009823 5.3e-09 63.9 52 61.5
Oeu012768.1 Olea europaea HOM05D007952 ORTHO05D009823 6.9e-09 63.5 45 71.1
Atru.chr9.2550 Acer truncatum HOM05D010190 ORTHO05D009823 9.0e-09 63.2 70 54.3
Peaxi162Scf00002g00723 Petunia axillaris HOM05D007952 ORTHO05D009823 9.0e-09 63.2 38 73.7
Sed0000469 Sechium edule HOM05D010190 ORTHO05D009823 2.6e-08 61.6 67 55.2
Sed0006309 Sechium edule HOM05D010190 ORTHO05D009823 2.6e-08 61.6 67 55.2
Oeu000007.1 Olea europaea HOM05D007952 ORTHO05D009823 1.7e-07 58.9 60 53.3
Sed0014465 Sechium edule HOM05D010190 ORTHO05D004271 6.5e-07 57.0 67 52.2
BcaC04g20704 Brassica carinata HOM05D007952 ORTHO05D009823 1.4e-06 55.8 60 55.0
Nn031s41604 Nelumbo nucifera HOM05D007952 ORTHO05D009823 1.9e-06 55.5 28 89.3
Nn233s45560 Nelumbo nucifera HOM05D007952 ORTHO05D009823 1.9e-06 55.5 28 89.3
Nn241s45689 Nelumbo nucifera HOM05D007952 ORTHO05D009823 1.9e-06 55.5 28 89.3
Nn6g33131 Nelumbo nucifera HOM05D007952 ORTHO05D009823 1.9e-06 55.5 28 89.3
Nn6g33484 Nelumbo nucifera HOM05D007952 ORTHO05D009823 1.9e-06 55.5 28 89.3
Oeu011728.3 Olea europaea HOM05D002681 ORTHO05D003372 1.9e-06 55.5 28 89.3
Nn1g08228 Nelumbo nucifera HOM05D007952 ORTHO05D009823 5.5e-06 53.9 28 85.7


User provided reference genes

Program Settings