Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1186.44 Capsicum annuum HOM05D000007 ORTHO05D000017 5.9e-123 444.1 209 100.0
CAN.G1186.26 Capsicum annuum HOM05D000007 ORTHO05D000017 2.0e-94 349.4 271 66.8
CAN.G851.36 Capsicum annuum HOM05D000007 ORTHO05D000017 1.5e-65 253.4 275 50.5
PGSC0003DMG400007431 Solanum tuberosum HOM05D000007 ORTHO05D000017 9.2e-52 207.6 316 38.9
Sopen11g004020 Solanum pennellii HOM05D000007 ORTHO05D000017 2.4e-47 193.0 318 37.4
Sopen11g004110 Solanum pennellii HOM05D000007 ORTHO05D000017 1.7e-45 186.8 319 37.0
CAN.G786.31 Capsicum annuum HOM05D000007 ORTHO05D000017 6.0e-43 178.3 244 47.1
PGSC0003DMG400013291 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.3e-40 170.6 288 38.2
Sopen11g007270 Solanum pennellii HOM05D000007 ORTHO05D000017 4.8e-40 168.7 292 37.3
Solyc11g012540.2 Solanum lycopersicum HOM05D000007 ORTHO05D000017 4.0e-39 165.6 292 37.3
CAN.G1557.16 Capsicum annuum HOM05D000007 ORTHO05D000017 4.9e-37 158.7 318 37.1
Sopen11g007290 Solanum pennellii HOM05D000007 ORTHO05D000017 6.4e-37 158.3 291 37.1
PGSC0003DMG400013290 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.1e-33 147.5 252 38.5
Nitab4.5_0001668g0070 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.5e-33 147.1 222 41.0
CAN.G222.162 Capsicum annuum HOM05D000007 ORTHO05D000017 3.1e-31 139.4 305 34.1
CAN.G645.21 Capsicum annuum HOM05D000007 ORTHO05D000017 3.1e-31 139.4 228 39.5
PGSC0003DMG400004721 Solanum tuberosum HOM05D000007 ORTHO05D000017 2.4e-28 129.8 292 32.9
PGSC0003DMG400043483 Solanum tuberosum HOM05D000007 ORTHO05D000017 3.2e-28 129.4 295 30.2
Nitab4.5_0002499g0060 Nicotiana tabacum HOM05D000007 ORTHO05D000017 4.2e-28 129.0 116 58.6
Nitab4.5_0001198g0090 Nicotiana tabacum HOM05D000007 ORTHO05D000017 2.1e-27 126.7 302 31.5
CAN.G575.119 Capsicum annuum HOM05D000007 ORTHO05D000017 4.6e-27 125.6 262 34.4
CAN.G575.102 Capsicum annuum HOM05D000007 ORTHO05D000017 6.0e-27 125.2 274 34.3
PGSC0003DMG400013272 Solanum tuberosum HOM05D000007 ORTHO05D000017 3.9e-26 122.5 302 29.5
PGSC0003DMG400013376 Solanum tuberosum HOM05D000007 ORTHO05D000017 3.9e-26 122.5 95 60.0
CAN.G1121.8 Capsicum annuum HOM05D000007 ORTHO05D000017 8.7e-26 121.3 293 29.7
Solyc11g012550.3 Solanum lycopersicum HOM05D000007 ORTHO05D000017 1.1e-25 120.9 116 57.8
Nitab4.5_0015235g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.5e-25 120.6 230 36.5
CAN.G181.19 Capsicum annuum HOM05D000007 ORTHO05D000017 3.3e-25 119.4 313 31.0
CAN.G1121.7 Capsicum annuum HOM05D000007 ORTHO05D000017 5.6e-25 118.6 294 31.3
CAN.G1565.4 Capsicum annuum HOM05D000007 ORTHO05D000017 9.6e-25 117.9 313 29.7
CAN.G575.77 Capsicum annuum HOM05D000007 ORTHO05D000017 9.6e-25 117.9 314 31.2
PGSC0003DMG400007423 Solanum tuberosum HOM05D000007 ORTHO05D000017 9.6e-25 117.9 114 53.5
PGSC0003DMG400027935 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.3e-24 117.5 286 30.1
PGSC0003DMG400013260 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.6e-24 117.1 306 30.1
CAN.G484.1 Capsicum annuum HOM05D000007 ORTHO05D000017 8.1e-24 114.8 289 29.8
CAN.G575.76 Capsicum annuum HOM05D000007 ORTHO05D000017 8.1e-24 114.8 281 31.0
PGSC0003DMG400043742 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.1e-23 114.4 295 29.8
Nitab4.5_0000143g0320 Nicotiana tabacum HOM05D000007 ORTHO05D000017 3.1e-23 112.8 214 35.5
CAN.G2177.13 Capsicum annuum HOM05D000007 ORTHO05D000017 9.0e-23 111.3 314 30.9
Nitab4.5_0000874g0100 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.5e-22 110.5 213 38.0
PGSC0003DMG400040830 Solanum tuberosum HOM05D000007 ORTHO05D000017 2.0e-22 110.2 289 30.4
CAN.G696.5 Capsicum annuum HOM05D001580 ORTHO05D000017 1.3e-21 107.5 294 30.3
CAN.G2702.1 Capsicum annuum HOM05D000007 ORTHO05D000017 1.7e-21 107.1 199 38.7
PGSC0003DMG400036000 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.7e-21 107.1 299 28.4
Nitab4.5_0002499g0180 Nicotiana tabacum HOM05D000007 ORTHO05D000017 4.9e-21 105.5 102 54.9
CAN.G575.137 Capsicum annuum HOM05D000007 ORTHO05D000017 8.4e-21 104.8 324 29.0
PGSC0003DMG400028421 Solanum tuberosum HOM05D000007 ORTHO05D000017 8.4e-21 104.8 293 28.3
Nitab4.5_0004725g0060 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.4e-20 104.0 172 43.0
CAN.G222.149 Capsicum annuum HOM05D001173 ORTHO05D000017 3.2e-20 102.8 223 37.2
PGSC0003DMG400022273 Solanum tuberosum HOM05D000007 ORTHO05D000949 5.5e-20 102.1 317 29.3
Nitab4.5_0001088g0160 Nicotiana tabacum HOM05D000007 ORTHO05D000017 3.5e-19 99.4 302 28.5
Sopen09g001450 Solanum pennellii HOM05D000007 ORTHO05D000017 3.5e-19 99.4 308 26.0
PGSC0003DMG400034923 Solanum tuberosum HOM05D000007 ORTHO05D000017 3.5e-19 99.4 299 29.4
Nitab4.5_0004725g0030 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.3e-18 97.4 117 49.6
CAN.G575.75 Capsicum annuum HOM05D000007 ORTHO05D000017 1.8e-18 97.1 265 27.5
Solyc09g005480.3 Solanum lycopersicum HOM05D000007 ORTHO05D000017 1.8e-18 97.1 302 27.2
Sopen09g001370 Solanum pennellii HOM05D000007 ORTHO05D000017 2.3e-18 96.7 308 26.6
CAN.G222.159 Capsicum annuum HOM05D000007 ORTHO05D000017 6.7e-18 95.1 121 47.1
Nitab4.5_0000437g0110 Nicotiana tabacum HOM05D000007 ORTHO05D000017 8.7e-18 94.7 95 48.4
PGSC0003DMG400003869 Solanum tuberosum HOM05D000007 ORTHO05D000017 8.7e-18 94.7 308 26.6
CAN.G1126.11 Capsicum annuum HOM05D000007 ORTHO05D000017 1.9e-17 93.6 87 54.0
CAN.G222.158 Capsicum annuum HOM05D000007 ORTHO05D000017 1.9e-17 93.6 114 48.2
CAN.G575.120 Capsicum annuum HOM05D000007 ORTHO05D000017 1.9e-17 93.6 120 50.0
PGSC0003DMG400029801 Solanum tuberosum HOM05D000007 ORTHO05D000017 2.5e-17 93.2 308 26.6
CAN.G488.27 Capsicum annuum HOM05D000007 ORTHO05D000017 5.7e-17 92.0 139 40.3
Solyc11g012560.3 Solanum lycopersicum HOM05D000007 ORTHO05D000017 7.4e-17 91.7 249 29.7
CAN.G575.138 Capsicum annuum HOM05D000007 ORTHO05D000017 1.6e-16 90.5 107 45.8
PGSC0003DMG400039496 Solanum tuberosum HOM05D000007 ORTHO05D000017 2.1e-16 90.1 283 26.9
CAN.G1579.16 Capsicum annuum HOM05D000007 ORTHO05D000017 4.8e-16 89.0 120 49.2
CAN.G2075.9 Capsicum annuum HOM05D000007 ORTHO05D000017 4.8e-16 89.0 120 49.2
CAN.G1209.3 Capsicum annuum HOM05D000007 ORTHO05D000017 8.2e-16 88.2 98 44.9
Sopen11g007280 Solanum pennellii HOM05D000007 ORTHO05D000017 8.2e-16 88.2 131 40.5
CAN.G2177.14 Capsicum annuum HOM05D000007 ORTHO05D000017 1.4e-15 87.4 252 29.8
Sopen11g006650 Solanum pennellii HOM05D000007 ORTHO05D000017 1.4e-15 87.4 265 28.3
PGSC0003DMG400040257 Solanum tuberosum HOM05D000007 ORTHO05D000017 3.1e-15 86.3 110 42.7
CAN.G321.65 Capsicum annuum HOM05D000007 ORTHO05D000017 9.0e-15 84.7 115 40.9
Nitab4.5_0000856g0040 Nicotiana tabacum HOM05D000007 ORTHO05D000017 3.4e-14 82.8 114 45.6
PGSC0003DMG400010705 Solanum tuberosum HOM05D000007 ORTHO05D000017 7.6e-14 81.6 88 48.9
CAN.G160.13 Capsicum annuum HOM05D000007 ORTHO05D000017 1.0e-13 81.3 92 43.5
CAN.G1703.14 Capsicum annuum HOM05D000007 ORTHO05D000017 1.0e-13 81.3 91 45.1
CAN.G484.2 Capsicum annuum HOM05D000007 ORTHO05D000017 1.0e-13 81.3 258 26.0
PGSC0003DMG400040733 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.0e-13 81.3 307 27.0
CAN.G1375.11 Capsicum annuum HOM05D000007 ORTHO05D000017 1.3e-13 80.9 287 27.5
Nitab4.5_0004725g0070 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.7e-13 80.5 88 45.5
PGSC0003DMG400040151 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.7e-13 80.5 87 44.8
CAN.G2122.5 Capsicum annuum HOM05D000007 ORTHO05D000017 8.4e-13 78.2 93 43.0
CAN.G321.66 Capsicum annuum HOM05D000007 ORTHO05D000017 8.4e-13 78.2 101 42.6
CAN.G1156.5 Capsicum annuum HOM05D000007 ORTHO05D000017 1.9e-12 77.0 118 45.8
PGSC0003DMG400025404 Solanum tuberosum HOM05D000007 ORTHO05D000017 7.1e-12 75.1 91 40.7
PGSC0003DMG400037258 Solanum tuberosum HOM05D000007 ORTHO05D000017 9.3e-12 74.7 117 44.4
Nitab4.5_0002499g0130 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.2e-11 74.3 109 42.2
Nitab4.5_0017036g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.6e-11 73.9 122 40.2
PGSC0003DMG400038354 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.6e-11 73.9 92 41.3
Nitab4.5_0000334g0270 Nicotiana tabacum HOM05D000007 ORTHO05D000017 3.5e-11 72.8 115 43.5
PGSC0003DMG400021641 Solanum tuberosum HOM05D000007 ORTHO05D000017 4.6e-11 72.4 303 27.7
CAN.G1579.17 Capsicum annuum HOM05D000007 ORTHO05D000017 6.1e-11 72.0 123 39.0
CAN.G2075.8 Capsicum annuum HOM05D000007 ORTHO05D011633 6.1e-11 72.0 123 39.0
CAN.G1799.4 Capsicum annuum HOM05D000007 ORTHO05D000017 7.9e-11 71.6 125 40.0
Nitab4.5_0002499g0150 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.0e-10 71.2 144 37.5
CAN.G623.50 Capsicum annuum HOM05D000007 ORTHO05D000017 1.3e-10 70.9 91 44.0
Nitab4.5_0001450g0080 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.3e-10 70.9 128 34.4
CAN.G1470.6 Capsicum annuum HOM05D000007 ORTHO05D000017 5.1e-10 68.9 270 25.2
PGSC0003DMG401013254 Solanum tuberosum HOM05D000007 ORTHO05D000017 5.1e-10 68.9 92 43.5
Solyc02g087270.2 Solanum lycopersicum HOM05D000007 ORTHO05D000017 6.7e-10 68.6 173 34.1
PGSC0003DMG400042553 Solanum tuberosum HOM05D000007 ORTHO05D000017 8.7e-10 68.2 97 41.2
CAN.G1034.48 Capsicum annuum HOM05D000007 ORTHO05D000017 1.5e-09 67.4 92 43.5
CAN.G520.10 Capsicum annuum HOM05D000007 ORTHO05D000017 1.5e-09 67.4 93 40.9
PGSC0003DMG400023430 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.5e-09 67.4 93 41.9
CAN.G1799.7 Capsicum annuum HOM05D000007 ORTHO05D000017 1.9e-09 67.0 125 39.2
CAN.G644.29 Capsicum annuum HOM05D000007 ORTHO05D000017 1.9e-09 67.0 115 41.7
Nitab4.5_0002050g0190 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.9e-09 67.0 127 39.4
Nitab4.5_0002050g0180 Nicotiana tabacum HOM05D000007 ORTHO05D000017 3.3e-09 66.2 146 33.6
Nitab4.5_0007853g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000017 3.3e-09 66.2 123 38.2
Nitab4.5_0000143g0330 Nicotiana tabacum HOM05D000007 ORTHO05D000017 5.7e-09 65.5 88 39.8
CAN.G108.40 Capsicum annuum HOM05D000007 ORTHO05D000017 7.4e-09 65.1 117 38.5
Nitab4.5_0000271g0070 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.3e-08 64.3 106 34.9
CAN.G623.46 Capsicum annuum HOM05D000007 ORTHO05D000017 1.6e-08 63.9 229 27.1
PGSC0003DMG400001294 Solanum tuberosum HOM05D000007 ORTHO05D000017 2.2e-08 63.5 95 37.9
Nitab4.5_0001036g0090 Nicotiana tabacum HOM05D000007 ORTHO05D000017 2.8e-08 63.2 138 32.6
CAN.G1121.9 Capsicum annuum HOM05D000007 ORTHO05D000017 3.7e-08 62.8 69 46.4
CAN.G375.46 Capsicum annuum HOM05D000007 ORTHO05D000017 3.7e-08 62.8 222 25.2
CAN.G884.13 Capsicum annuum HOM05D000007 ORTHO05D000017 4.8e-08 62.4 97 42.3
CAN.G424.43 Capsicum annuum HOM05D000007 ORTHO05D000017 6.3e-08 62.0 89 46.1
CAN.G1134.13 Capsicum annuum HOM05D000176 ORTHO05D000017 8.2e-08 61.6 197 29.4
PGSC0003DMG400036420 Solanum tuberosum HOM05D000007 ORTHO05D000017 8.2e-08 61.6 114 39.5
Thecc.08G124100 Theobroma cacao HOM05D000007 ORTHO05D000017 1.1e-07 61.2 110 35.5
Nitab4.5_0000519g0240 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.4e-07 60.8 102 36.3
Hma1.2p1_0187F.1_g081920 Hydrangea macrophylla HOM05D000007 ORTHO05D000017 2.4e-07 60.1 235 25.1
Nitab4.5_0000519g0140 Nicotiana tabacum HOM05D000007 ORTHO05D000017 3.1e-07 59.7 106 36.8
CAN.G2075.10 Capsicum annuum HOM05D000007 ORTHO05D000017 4.1e-07 59.3 68 50.0
RcHm_v2.0_Chr1g0347341 Rosa chinensis HOM05D000007 ORTHO05D000017 4.1e-07 59.3 173 28.3
PGSC0003DMG400002433 Solanum tuberosum HOM05D000007 ORTHO05D000017 4.1e-07 59.3 175 28.0
CAN.G1470.10 Capsicum annuum HOM05D000007 ORTHO05D000017 5.3e-07 58.9 95 43.2
Nitab4.5_0001659g0120 Nicotiana tabacum HOM05D000007 ORTHO05D000017 6.9e-07 58.5 57 47.4
Nitab4.5_0019486g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000017 9.0e-07 58.2 95 38.9
Solyc02g091570.1 Solanum lycopersicum HOM05D000007 ORTHO05D000017 1.2e-06 57.8 124 37.1
CAN.G1565.5 Capsicum annuum HOM05D000007 ORTHO05D000017 1.5e-06 57.4 93 40.9
CAN.G488.23 Capsicum annuum HOM05D000007 ORTHO05D000017 2.0e-06 57.0 94 35.1
Nitab4.5_0001728g0030 Nicotiana tabacum HOM05D000007 ORTHO05D000017 2.0e-06 57.0 46 58.7
Solyc09g005770.1 Solanum lycopersicum HOM05D000007 ORTHO05D000017 2.0e-06 57.0 111 36.9
Nitab4.5_0001290g0170 Nicotiana tabacum HOM05D000007 ORTHO05D000017 5.9e-06 55.5 63 54.0
Nitab4.5_0002499g0170 Nicotiana tabacum HOM05D000007 ORTHO05D000017 5.9e-06 55.5 97 34.0
CAN.G473.136 Capsicum annuum HOM05D000007 ORTHO05D000017 7.7e-06 55.1 129 34.1
Nitab4.5_0006683g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000017 7.7e-06 55.1 83 42.2


User provided reference genes

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