Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1186.29 Capsicum annuum HOM05D005487 ORTHO05D007280 1.1e-256 889.4 422 100.0
Nitab4.5_0000143g0260 Nicotiana tabacum HOM05D005487 ORTHO05D007280 1.8e-240 835.5 420 93.8
Nitab4.5_0001198g0060 Nicotiana tabacum HOM05D005487 ORTHO05D007280 3.4e-239 831.2 420 93.8
Sopen11g006950 Solanum pennellii HOM05D005487 ORTHO05D007280 5.0e-238 827.4 422 92.2
Solyc11g012160.2 Solanum lycopersicum HOM05D005487 ORTHO05D007280 1.1e-237 826.2 422 91.5
Peaxi162Scf00558g00518 Petunia axillaris HOM05D005487 ORTHO05D007280 6.7e-227 790.4 460 83.3
PGSC0003DMG400013273 Solanum tuberosum HOM05D005487 ORTHO05D007280 5.7e-226 787.3 505 76.6
Oeu044422.1 Olea europaea HOM05D005487 ORTHO05D007280 1.2e-215 753.1 420 83.8
Hma1.2p1_0135F.1_g061730 Hydrangea macrophylla HOM05D005487 ORTHO05D007280 1.2e-212 743.0 420 81.9
Cc09_g00910 Coffea canephora HOM05D005487 ORTHO05D007280 8.0e-212 740.3 419 82.6
CiPaw.10G077700 Carya illinoinensis HOM05D005487 ORTHO05D007280 1.0e-211 740.0 419 81.1
QL05p069756 Quercus lobata HOM05D005487 ORTHO05D007280 1.4e-211 739.6 421 82.4
Nn1g07355 Nelumbo nucifera HOM05D005487 ORTHO05D007280 1.8e-211 739.2 422 82.0
RcHm_v2.0_Chr5g0001571 Rosa chinensis HOM05D005487 ORTHO05D007280 8.8e-211 736.9 418 81.1
TAR629G3393 Trochodendron aralioides HOM05D005487 ORTHO05D007280 4.4e-210 734.6 422 81.8
Cfa000109 Carpinus fangiana HOM05D005487 ORTHO05D007280 9.8e-210 733.4 419 82.1
TAR724G0004 Trochodendron aralioides HOM05D005487 ORTHO05D007280 9.8e-210 733.4 422 82.2
CSS0007892 Camellia sinensis var. sinensis HOM05D005487 ORTHO05D007280 1.3e-209 733.0 422 81.3
FvH4_3g01030 Fragaria vesca HOM05D005487 ORTHO05D007280 1.7e-209 732.6 420 81.0
TWI38G0871 Tripterygium wilfordii HOM05D005487 ORTHO05D007280 2.2e-209 732.3 420 81.4
Lj2C262G3 Lonicera japonica HOM05D005487 ORTHO05D007280 2.8e-209 731.9 414 82.6
Potri.006G009200 Populus trichocarpa HOM05D005487 ORTHO05D007280 8.3e-209 730.3 420 81.0
Actinidia26862 Actinidia chinensis HOM05D005487 ORTHO05D007280 1.1e-208 729.9 419 80.7
EL10Ac8g20177 Beta vulgaris HOM05D005487 ORTHO05D007280 2.4e-208 728.8 420 80.0
Atru.chr1.2460 Acer truncatum HOM05D005487 ORTHO05D007280 4.1e-208 728.0 420 80.5
PSO764G0115 Papaver somniferum HOM05D005487 ORTHO05D007280 4.1e-208 728.0 419 81.1
Actinidia11881 Actinidia chinensis HOM05D005487 ORTHO05D007280 7.0e-208 727.2 419 81.4
PSO210G3736 Papaver somniferum HOM05D005487 ORTHO05D007280 1.2e-207 726.5 418 81.1
PGR004G0814 Punica granatum HOM05D005487 ORTHO05D007280 1.2e-207 726.5 420 79.8
Ciclev10015367m.g Citrus clementina HOM05D005487 ORTHO05D007280 2.0e-207 725.7 419 80.4
Manes.09G070300 Manihot esculenta HOM05D005487 ORTHO05D007280 4.5e-207 724.5 419 80.2
Prupe.4G011100 Prunus persica HOM05D005487 ORTHO05D007280 4.5e-207 724.5 420 80.2
HanXRQChr10g0284101 Helianthus annuus HOM05D005487 ORTHO05D007280 1.3e-206 723.0 420 80.5
GSVIVG01003351001 Vitis vinifera HOM05D005487 ORTHO05D007280 2.3e-206 722.2 419 79.7
FAN21G2054 Fragaria x ananassa HOM05D005487 ORTHO05D007280 6.5e-206 720.7 420 79.5
SalBow8G2024 Salvia bowleyana HOM05D005487 ORTHO05D007280 1.1e-205 719.9 419 80.2
Nn1g03329 Nelumbo nucifera HOM05D005487 ORTHO05D007280 1.5e-205 719.5 422 79.6
MSTRG.16025 Avicennia marina HOM05D005487 ORTHO05D007280 2.5e-205 718.8 420 80.0
MBI19_g29429_MAGBIO Magnolia biondii HOM05D005487 ORTHO05D007280 5.5e-205 717.6 419 79.7
AUR62021869 Chenopodium quinoa HOM05D005487 ORTHO05D007280 2.1e-204 715.7 420 78.8
Duzib192G1033 Durio zibethinus HOM05D005487 ORTHO05D007280 2.1e-204 715.7 418 80.1
MD10G1331100 Malus domestica HOM05D005487 ORTHO05D007280 2.8e-204 715.3 421 79.6
Thecc.06G232800 Theobroma cacao HOM05D005487 ORTHO05D007280 1.8e-203 712.6 419 79.7
arahy.Tifrunner.gnm1.ann1.8PBE23 Arachis hypogaea HOM05D005487 ORTHO05D007280 1.2e-202 709.9 419 77.8
Dinv07399 Davidia involucrata HOM05D005487 ORTHO05D007280 2.0e-202 709.1 401 82.5
arahy.Tifrunner.gnm1.ann1.61KG5W Arachis hypogaea HOM05D005487 ORTHO05D007280 2.6e-202 708.8 419 77.8
Rhsim13G0146300 Rhododendron simsii HOM05D005487 ORTHO05D007280 3.4e-202 708.4 449 74.6
RhsimUnG0109400 Rhododendron simsii HOM05D005487 ORTHO05D007280 3.4e-202 708.4 449 74.6
Lsat_1_v5_gn_8_64401 Lactuca sativa HOM05D005487 ORTHO05D007280 4.4e-202 708.0 424 79.5
Gorai.010G250300 Gossypium raimondii HOM05D005487 ORTHO05D007280 2.2e-201 705.7 418 78.5
Gohir.A06G205600 Gossypium hirsutum HOM05D005487 ORTHO05D007280 3.7e-201 704.9 418 78.2
Sed0025030 Sechium edule HOM05D005487 ORTHO05D007280 4.9e-201 704.5 422 77.3
COL.COLO4_31878 Corchorus olitorius HOM05D005487 ORTHO05D007280 6.3e-201 704.1 423 77.5
AL1G23300 Arabidopsis lyrata HOM05D005487 ORTHO05D007280 1.1e-200 703.4 419 76.8
Gohir.D06G215900 Gossypium hirsutum HOM05D005487 ORTHO05D007280 1.1e-200 703.4 418 78.2
THA.LOC104809472 Tarenaya hassleriana HOM05D005487 ORTHO05D007280 1.4e-200 703.0 418 78.5
CANSAT56G2574 Cannabis sativa HOM05D005487 ORTHO05D007280 1.8e-200 702.6 418 77.8
Gorai.009G182900 Gossypium raimondii HOM05D005487 ORTHO05D007280 1.8e-200 702.6 418 78.5
Eucgr.L00543 Eucalyptus grandis HOM05D005487 ORTHO05D007280 2.4e-200 702.2 453 73.3
Sp1g10720 Schrenkiella parvula HOM05D005487 ORTHO05D007280 2.4e-200 702.2 418 77.0
ClCG01G021500 Citrullus lanatus HOM05D005487 ORTHO05D007280 5.4e-200 701.0 421 78.1
Cpa.g.sc75.119 Carica papaya HOM05D005487 ORTHO05D007280 9.2e-200 700.3 418 78.5
AT1G12050 Arabidopsis thaliana HOM05D005487 ORTHO05D007280 2.0e-199 699.1 419 76.8
Gohir.A05G174500 Gossypium hirsutum HOM05D005487 ORTHO05D007280 3.5e-199 698.4 418 78.0
Aqoxy1G04106 Aquilegia oxysepala HOM05D005487 ORTHO05D007280 4.5e-199 698.0 422 77.3
Gohir.D05G177500 Gossypium hirsutum HOM05D005487 ORTHO05D007280 4.5e-199 698.0 418 78.0
Psat1g176520 Pisum sativum HOM05D005487 ORTHO05D007280 5.9e-199 697.6 418 76.6
BcaB02g06431 Brassica carinata HOM05D005487 ORTHO05D007280 7.8e-199 697.2 419 76.1
BolC5t29858H Brassica oleracea HOM05D005487 ORTHO05D007280 7.8e-199 697.2 418 76.3
Carub.0001s1173 Capsella rubella HOM05D005487 ORTHO05D007280 1.0e-198 696.8 418 76.3
Thhalv10007724m.g Eutrema salsugineum HOM05D005487 ORTHO05D007280 1.3e-198 696.4 418 76.6
Lalb_Chr15g0087971 Lupinus albus HOM05D005487 ORTHO05D007280 6.6e-198 694.1 418 77.3
Aa31LG1G2680 Aethionema arabicum HOM05D005487 ORTHO05D007280 1.9e-197 692.6 418 76.3
CARHR012410 Cardamine hirsuta HOM05D005487 ORTHO05D007280 1.9e-197 692.6 418 75.8
Hund23409 Selenicereus undatus HOM05D005487 ORTHO05D007280 2.5e-197 692.2 396 80.3
Sopen04g006840 Solanum pennellii HOM05D005487 ORTHO05D007280 2.5e-197 692.2 420 77.9
PGSC0003DMG400023608 Solanum tuberosum HOM05D005487 ORTHO05D007280 3.3e-197 691.8 420 77.6
VMungo0540G1792 Vigna mungo HOM05D005487 ORTHO05D007280 3.3e-197 691.8 418 76.8
CsaV3_6G048520 Cucumis sativus L. HOM05D005487 ORTHO05D007280 5.6e-197 691.0 420 76.9
CAN.G1263.14 Capsicum annuum HOM05D005487 ORTHO05D007280 9.5e-197 690.3 420 77.1
Medtr2g025640 Medicago truncatula HOM05D005487 ORTHO05D007280 9.5e-197 690.3 417 75.5
TPR.G13057 Trifolium pratense HOM05D005487 ORTHO05D007280 1.2e-196 689.9 418 75.8
MELO3C007433.2 Cucumis melo HOM05D005487 ORTHO05D007280 1.6e-196 689.5 421 76.5
Ca_00719_v3 Cicer arietinum L. HOM05D005487 ORTHO05D007280 4.7e-196 688.0 417 76.3
Phvul.006G143500 Phaseolus vulgaris HOM05D005487 ORTHO05D007280 8.0e-196 687.2 418 76.1
Lj6g0015557 Lotus japonicus HOM05D005487 ORTHO05D007280 1.4e-195 686.4 417 76.7
FAN25G0861 Fragaria x ananassa HOM05D005487 ORTHO05D007280 1.2e-194 683.3 398 80.2
Glyma.15G114300 Glycine max HOM05D005487 ORTHO05D007280 1.2e-194 683.3 418 75.4
SGA_v2.0_scaffold7G03757 Striga asiatica HOM05D005487 ORTHO05D007280 1.5e-194 682.9 430 76.5
Glyma.09G010000 Glycine max HOM05D005487 ORTHO05D007280 3.4e-194 681.8 418 76.1
vmacro03645 Vaccinium macrocarpon HOM05D005487 ORTHO05D007280 1.3e-193 679.9 411 78.6
Peaxi162Scf00442g00414 Petunia axillaris HOM05D005487 ORTHO05D007280 1.7e-193 679.5 457 71.6
Solyc04g014730.4 Solanum lycopersicum HOM05D005487 ORTHO05D007280 1.4e-192 676.4 413 77.2
BcaC05g25225 Brassica carinata HOM05D005487 ORTHO05D007280 1.7e-190 669.5 404 76.2
A06p09440 Brassica napus HOM05D005487 ORTHO05D007280 1.7e-190 669.5 405 76.5
BraA06t24129Z Brassica rapa HOM05D005487 ORTHO05D007280 3.9e-190 668.3 405 76.3
C05p11110 Brassica napus HOM05D005487 ORTHO05D007280 8.6e-190 667.2 404 76.0
Haze_06922 Corylus avellana HOM05D005487 ORTHO05D007280 8.6e-190 667.2 432 74.8
ATR1101G021 Amborella trichopoda HOM05D005487 ORTHO05D007280 7.3e-189 664.1 423 74.7
HPP92_003014 Vanilla planifolia HOM05D005487 ORTHO05D007280 3.6e-188 661.8 425 71.8
HPP92_027542 Vanilla planifolia HOM05D005487 ORTHO05D007280 3.6e-188 661.8 426 71.8
unitig_0.g999 Utricularia gibba HOM05D005487 ORTHO05D007280 4.7e-188 661.4 384 78.9
Haze_06917 Corylus avellana HOM05D005487 ORTHO05D007280 1.2e-186 656.8 456 70.6
CDE07G0927 Ceratophyllum demersum HOM05D005487 ORTHO05D007280 1.1e-184 650.2 432 72.2
Os02g0196800 Oryza sativa ssp. japonica HOM05D005487 ORTHO05D007280 1.0e-182 643.7 420 68.6
Zm00001eb236160 Zea mays HOM05D005487 ORTHO05D007280 6.6e-182 641.0 419 68.5
DCAR_027826 Daucus carota HOM05D005487 ORTHO05D007280 1.9e-181 639.4 419 74.0
AUR62012785 Chenopodium quinoa HOM05D005487 ORTHO05D007280 1.4e-176 623.2 402 73.4
Sabra06G0007000 Salix brachista HOM05D005487 ORTHO05D007280 1.1e-173 613.6 416 72.1
Pp3c4_7990 Physcomitrium patens HOM05D005487 ORTHO05D007280 4.9e-161 571.6 419 64.9
Duzib235G0086 Durio zibethinus HOM05D005487 ORTHO05D007280 4.2e-160 568.5 371 73.3
Migut.M01391 Erythranthe guttata HOM05D005487 ORTHO05D007280 8.7e-158 560.8 422 66.6
SMO137G0224 Selaginella moellendorffii HOM05D005487 ORTHO05D007280 1.5e-157 560.1 418 63.9
Sc17g0007720 Simmondsia chinensis HOM05D005487 ORTHO05D007280 1.5e-157 560.1 300 83.0
Mapoly0022s0035 Marchantia polymorpha HOM05D005487 ORTHO05D007280 1.3e-156 557.0 417 61.2
Ah.09g234260 Amaranthus hybridus HOM05D005487 ORTHO05D007280 6.2e-156 554.7 422 65.4
Zm00001eb205930 Zea mays HOM05D005487 ORTHO05D007280 1.7e-153 546.6 358 68.7
AagrBONN_evm.TU.Sc2ySwM_344.3343 Anthoceros agrestis HOM05D005487 ORTHO05D007280 6.4e-153 544.7 420 62.1
CSS0007230 Camellia sinensis var. sinensis HOM05D005487 ORTHO05D007280 6.7e-150 534.6 441 63.5
Pp3c13_16620 Physcomitrium patens HOM05D005487 ORTHO05D007280 2.1e-140 503.1 360 66.1
Haze_26411 Corylus avellana HOM05D005487 ORTHO05D007280 8.2e-140 501.1 425 55.5
ECA236G3803 Erigeron canadensis HOM05D005487 ORTHO05D007280 6.3e-132 474.9 274 80.3
RcHm_v2.0_Chr3g0484131 Rosa chinensis HOM05D005487 ORTHO05D007280 6.1e-127 458.4 466 54.5
RcHm_v2.0_Chr3g0477951 Rosa chinensis HOM05D005487 ORTHO05D007280 6.7e-126 454.9 470 54.3
CBR_g46703 Chara braunii HOM05D005487 ORTHO05D007280 5.0e-121 438.7 468 48.5
Cre17.g732802 Chlamydomonas reinhardtii HOM05D005487 ORTHO05D007280 2.1e-119 433.3 470 48.1
PRCOL_00001448 Prasinoderma coloniale HOM05D005487 ORTHO05D007280 1.3e-108 397.5 422 49.8
Gorai.001G209700 Gossypium raimondii HOM05D005487 ORTHO05D007280 5.6e-48 196.1 115 75.7
RcHm_v2.0_Chr5g0003621 Rosa chinensis HOM05D005487 ORTHO05D007280 1.5e-32 144.8 132 56.1
Gohir.D07G188750 Gossypium hirsutum HOM05D005487 ORTHO05D007280 5.3e-30 136.3 115 57.4
C06p15210 Brassica napus HOM05D005487 ORTHO05D042797 2.7e-26 124.0 90 64.4
BolC6t36696H Brassica oleracea HOM05D005487 ORTHO05D042797 2.7e-26 124.0 90 64.4
SEGI_36702 Sequoiadendron giganteum HOM05D005487 ORTHO05D007280 3.5e-26 123.6 94 66.0
Gohir.D13G151750 Gossypium hirsutum HOM05D005487 ORTHO05D007280 2.5e-19 100.9 55 80.0
COL.COLO4_27266 Corchorus olitorius HOM05D000025 ORTHO05D000040 3.3e-16 90.5 136 39.0
BcaC08g44100 Brassica carinata HOM05D005487 ORTHO05D027150 6.3e-15 86.3 70 58.6
BolC9t55424H Brassica oleracea HOM05D005487 ORTHO05D027150 2.4e-14 84.3 68 60.3
BcaC04g21976 Brassica carinata HOM05D005487 ORTHO05D027150 4.1e-14 83.6 68 58.8
C09p25260 Brassica napus HOM05D005487 ORTHO05D027150 1.7e-12 78.2 66 57.6
CAN.G327.2 Capsicum annuum HOM05D001287 ORTHO05D010951 6.3e-07 59.7 25 100.0
TAR381G0287 Trochodendron aralioides HOM05D005487 ORTHO05D415274 1.8e-06 58.2 36 66.7
SEGI_21127 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 9.1e-06 55.8 66 48.5


User provided reference genes

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