Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1184.14 Capsicum annuum HOM05D007832 ORTHO05D009598 7.3e-81 303.9 161 100.0
CAN.G1392.11 Capsicum annuum HOM05D007832 ORTHO05D009598 2.5e-65 252.3 161 82.0
CAN.G843.3 Capsicum annuum HOM05D007832 ORTHO05D009598 4.0e-39 165.2 160 55.6
CAN.G843.2 Capsicum annuum HOM05D007832 ORTHO05D009598 3.4e-38 162.2 160 55.0
CAN.G843.1 Capsicum annuum HOM05D007832 ORTHO05D009598 1.0e-37 160.6 156 53.8
PGSC0003DMG400005533 Solanum tuberosum HOM05D007832 ORTHO05D009598 1.0e-37 160.6 160 54.4
PGSC0003DMG400035463 Solanum tuberosum HOM05D007832 ORTHO05D009598 3.9e-34 148.7 161 53.4
PGSC0003DMG400005534 Solanum tuberosum HOM05D007832 ORTHO05D009598 2.0e-30 136.3 160 47.5
PGSC0003DMG400039981 Solanum tuberosum HOM05D007832 ORTHO05D009598 4.5e-30 135.2 145 49.0
Nitab4.5_0000234g0010 Nicotiana tabacum HOM05D007832 ORTHO05D009598 7.6e-30 134.4 161 49.7
Nitab4.5_0007309g0020 Nicotiana tabacum HOM05D007832 ORTHO05D009598 3.8e-29 132.1 163 48.5
Peaxi162Scf00440g00014 Petunia axillaris HOM05D007832 ORTHO05D009598 4.6e-27 125.2 158 48.1
CAN.G1392.12 Capsicum annuum HOM05D007832 ORTHO05D009598 1.0e-26 124.0 79 82.3
PGSC0003DMG400035476 Solanum tuberosum HOM05D007832 ORTHO05D009598 4.3e-25 118.6 158 45.6
PGSC0003DMG400044231 Solanum tuberosum HOM05D007832 ORTHO05D009598 4.3e-25 118.6 158 46.2
Sopen12g007870 Solanum pennellii HOM05D007832 ORTHO05D009598 2.2e-24 116.3 158 45.6
Sopen12g007960 Solanum pennellii HOM05D007832 ORTHO05D009598 6.3e-24 114.8 158 45.6
Sopen12g007920 Solanum pennellii HOM05D007832 ORTHO05D009598 8.2e-24 114.4 158 45.6
PGSC0003DMG400005968 Solanum tuberosum HOM05D007832 ORTHO05D009598 8.2e-24 114.4 156 44.9
PGSC0003DMG400044285 Solanum tuberosum HOM05D007832 ORTHO05D009598 8.2e-24 114.4 158 45.6
Solyc12g016170.1 Solanum lycopersicum HOM05D007832 ORTHO05D009598 1.1e-23 114.0 158 44.3
Sopen12g025810 Solanum pennellii HOM05D007832 ORTHO05D009598 1.1e-23 114.0 158 44.9
PGSC0003DMG400045649 Solanum tuberosum HOM05D007832 ORTHO05D009598 1.1e-23 114.0 158 44.9
Peaxi162Scf00006g00057 Petunia axillaris HOM05D007832 ORTHO05D009598 1.8e-23 113.2 158 43.7
Peaxi162Scf00006g00075 Petunia axillaris HOM05D007832 ORTHO05D009598 1.8e-23 113.2 158 43.7
PGSC0003DMG400034608 Solanum tuberosum HOM05D007832 ORTHO05D009598 3.1e-23 112.5 158 44.3
PGSC0003DMG400044576 Solanum tuberosum HOM05D007832 ORTHO05D009598 4.1e-23 112.1 157 42.7
Solyc12g016180.1 Solanum lycopersicum HOM05D007832 ORTHO05D009598 6.9e-23 111.3 158 43.7
Sopen12g007950 Solanum pennellii HOM05D007832 ORTHO05D009598 9.1e-23 110.9 158 44.3
Nitab4.5_0000153g0130 Nicotiana tabacum HOM05D007832 ORTHO05D009598 2.2e-21 106.3 158 46.2
Nitab4.5_0008777g0010 Nicotiana tabacum HOM05D007832 ORTHO05D009598 3.8e-21 105.5 158 45.6
Sopen11g026860 Solanum pennellii HOM05D007832 ORTHO05D009598 4.2e-20 102.1 144 42.4
Peaxi162Scf00617g00011 Petunia axillaris HOM05D007832 ORTHO05D009598 1.0e-18 97.4 147 40.8
Peaxi162Scf00611g00515 Petunia axillaris HOM05D007832 ORTHO05D009598 3.9e-18 95.5 140 44.3
PGSC0003DMG400037342 Solanum tuberosum HOM05D007832 ORTHO05D009598 5.1e-18 95.1 139 43.9
PGSC0003DMG400046736 Solanum tuberosum HOM05D007832 ORTHO05D009598 6.7e-18 94.7 141 41.8
Peaxi162Scf00307g00011 Petunia axillaris HOM05D007832 ORTHO05D009598 1.1e-17 94.0 141 43.3
Peaxi162Scf00894g00002 Petunia axillaris HOM05D007832 ORTHO05D009598 1.1e-17 94.0 141 43.3
Peaxi162Scf03110g00001 Petunia axillaris HOM05D007832 ORTHO05D009598 1.1e-17 94.0 141 43.3
Peaxi162Scf00593g00002 Petunia axillaris HOM05D014229 ORTHO05D009598 1.3e-16 90.5 142 40.1
Solyc12g005210.1 Solanum lycopersicum HOM05D007832 ORTHO05D009598 1.3e-16 90.5 73 60.3
Nitab4.5_0000163g0010 Nicotiana tabacum HOM05D007832 ORTHO05D009598 2.2e-16 89.7 158 38.6
PGSC0003DMG400047062 Solanum tuberosum HOM05D007832 ORTHO05D009598 3.7e-16 89.0 158 39.2
CAN.G782.17 Capsicum annuum HOM05D007832 ORTHO05D009598 8.2e-16 87.8 155 36.1
CAN.G26643.1 Capsicum annuum HOM05D007832 ORTHO05D009598 3.1e-15 85.9 76 59.2
CAN.G843.4 Capsicum annuum HOM05D007832 ORTHO05D009598 6.9e-15 84.7 76 61.8
Peaxi162Scf00617g00002 Petunia axillaris HOM05D007832 ORTHO05D009598 2.6e-14 82.8 140 38.6
Peaxi162Scf00617g00003 Petunia axillaris HOM05D007832 ORTHO05D009598 2.6e-14 82.8 140 40.7
Peaxi162Scf00617g00012 Petunia axillaris HOM05D007832 ORTHO05D009598 2.6e-14 82.8 134 38.1
Sopen12g025820 Solanum pennellii HOM05D000004 ORTHO05D009598 5.0e-13 78.6 117 43.6
Nitab4.5_0007309g0050 Nicotiana tabacum HOM05D007832 ORTHO05D009598 7.2e-12 74.7 125 39.2
Nitab4.5_0003358g0030 Nicotiana tabacum HOM05D007832 ORTHO05D009598 2.1e-11 73.2 128 37.5
Solyc12g016150.1 Solanum lycopersicum HOM05D007832 ORTHO05D009598 2.1e-11 73.2 122 37.7
Peaxi162Scf01193g00001 Petunia axillaris HOM05D007832 ORTHO05D009598 2.7e-11 72.8 131 38.2
Nitab4.5_0002260g0260 Nicotiana tabacum HOM05D007832 ORTHO05D009598 4.7e-11 72.0 128 38.3
Peaxi162Scf00061g00181 Petunia axillaris HOM05D000307 ORTHO05D009598 6.1e-11 71.6 157 31.8
Solyc12g017300.1 Solanum lycopersicum HOM05D007832 ORTHO05D009598 8.0e-11 71.2 115 38.3
Nitab4.5_0000738g0160 Nicotiana tabacum HOM05D000307 ORTHO05D009598 1.0e-10 70.9 158 32.3
PGSC0003DMG400041411 Solanum tuberosum HOM05D007832 ORTHO05D009598 1.4e-10 70.5 152 34.2
Nitab4.5_0004114g0070 Nicotiana tabacum HOM05D007832 ORTHO05D009598 1.8e-10 70.1 120 38.3
AT5G06500 Arabidopsis thaliana HOM05D000307 ORTHO05D000166 3.0e-10 69.3 128 29.7
Peaxi162Scf00538g00047 Petunia axillaris HOM05D007832 ORTHO05D009598 1.5e-09 67.0 132 36.4
Carub.0006s0539 Capsella rubella HOM05D000307 ORTHO05D010810 4.4e-09 65.5 122 29.5
BcaB05g21666 Brassica carinata HOM05D008733 ORTHO05D010810 5.7e-09 65.1 146 29.5
Peaxi162Scf00593g00034 Petunia axillaris HOM05D007832 ORTHO05D009598 1.3e-08 63.9 123 35.0
Peaxi162Scf29147g00002 Petunia axillaris HOM05D007832 ORTHO05D009598 1.7e-08 63.5 112 37.5
Sp6g36360 Schrenkiella parvula HOM05D008733 ORTHO05D010810 1.7e-08 63.5 152 28.3
Sopen12g025800 Solanum pennellii HOM05D007832 ORTHO05D009598 1.7e-08 63.5 73 52.1
Lj1C377T1 Lonicera japonica HOM05D000307 ORTHO05D000166 2.2e-08 63.2 162 28.4
C09p70280 Brassica napus HOM05D008733 ORTHO05D010810 3.7e-08 62.4 137 29.2
C09p70310 Brassica napus HOM05D008733 ORTHO05D010810 3.7e-08 62.4 137 29.2
BolC9t59772H Brassica oleracea HOM05D008733 ORTHO05D010810 3.7e-08 62.4 137 29.2
BolC9t59774H Brassica oleracea HOM05D008733 ORTHO05D010810 3.7e-08 62.4 137 29.2
BolC9t59776H Brassica oleracea HOM05D008733 ORTHO05D010810 3.7e-08 62.4 137 29.2
Atru.chr1.1376 Acer truncatum HOM05D000307 ORTHO05D000166 1.1e-07 60.8 160 25.6
Duzib106G1547 Durio zibethinus HOM05D000307 ORTHO05D000166 1.1e-07 60.8 160 28.8
Migut.B01615 Erythranthe guttata HOM05D000307 ORTHO05D009598 1.1e-07 60.8 157 28.0
A10p29910 Brassica napus HOM05D008733 ORTHO05D010810 1.8e-07 60.1 149 28.2
BraA10t45030Z Brassica rapa HOM05D008733 ORTHO05D010810 1.8e-07 60.1 149 28.2
Lj1C376T8 Lonicera japonica HOM05D000307 ORTHO05D000166 2.4e-07 59.7 162 28.4
BcaB06g25575 Brassica carinata HOM05D000307 ORTHO05D000166 3.1e-07 59.3 161 32.9
C09p70570 Brassica napus HOM05D008733 ORTHO05D010810 4.1e-07 58.9 140 28.6
BraA10t45054Z Brassica rapa HOM05D008733 ORTHO05D010810 4.1e-07 58.9 140 28.6
CAN.G765.41 Capsicum annuum HOM05D007832 ORTHO05D009598 4.1e-07 58.9 138 31.2
COL.COLO4_29537 Corchorus olitorius HOM05D000307 ORTHO05D000166 5.3e-07 58.5 160 26.9
Sabra06G0155200 Salix brachista HOM05D000307 ORTHO05D000166 5.3e-07 58.5 158 28.5
Thhalv10021945m.g Eutrema salsugineum HOM05D000307 ORTHO05D000166 7.0e-07 58.2 142 31.0
BcaB06g25582 Brassica carinata HOM05D000307 ORTHO05D000166 9.1e-07 57.8 161 32.3
Thhalv10022157m.g Eutrema salsugineum HOM05D000307 ORTHO05D000166 1.2e-06 57.4 156 28.8
THA.LOC104827443 Tarenaya hassleriana HOM05D000307 ORTHO05D000166 1.2e-06 57.4 157 29.9
TWI39G0715 Tripterygium wilfordii HOM05D000307 ORTHO05D000166 1.2e-06 57.4 126 32.5
BraA02t04882Z Brassica rapa HOM05D000307 ORTHO05D000166 1.6e-06 57.0 138 28.3
Duzib128G0455 Durio zibethinus HOM05D000307 ORTHO05D000166 1.6e-06 57.0 160 26.9
Thhalv10016044m.g Eutrema salsugineum HOM05D000307 ORTHO05D010810 1.6e-06 57.0 133 27.1
AL3G39810 Arabidopsis lyrata HOM05D000307 ORTHO05D000166 2.0e-06 56.6 137 29.9
BcaC03g13165 Brassica carinata HOM05D000307 ORTHO05D000166 2.0e-06 56.6 138 27.5
C02p02730 Brassica napus HOM05D000307 ORTHO05D000166 2.0e-06 56.6 138 27.5
BolC2t06238H Brassica oleracea HOM05D000307 ORTHO05D000166 2.0e-06 56.6 138 27.5
THA.LOC104809945 Tarenaya hassleriana HOM05D000307 ORTHO05D000166 2.0e-06 56.6 156 25.6
A05p37540 Brassica napus HOM05D000307 ORTHO05D000166 2.6e-06 56.2 157 29.9
CAN.G201.31 Capsicum annuum HOM05D007832 ORTHO05D009598 2.6e-06 56.2 102 35.3
Gohir.A09G140801 Gossypium hirsutum HOM05D000307 ORTHO05D000166 2.6e-06 56.2 155 28.4
Prupe.6G304100 Prunus persica HOM05D000307 ORTHO05D000166 2.6e-06 56.2 139 33.1
CAN.G765.43 Capsicum annuum HOM05D007832 ORTHO05D009598 3.5e-06 55.8 72 44.4
PGSC0003DMG400038163 Solanum tuberosum HOM05D007832 ORTHO05D009598 4.5e-06 55.5 73 45.2
TWI39G0880 Tripterygium wilfordii HOM05D000307 ORTHO05D000166 4.5e-06 55.5 142 31.7
BcaB06g25577 Brassica carinata HOM05D000307 ORTHO05D000166 5.9e-06 55.1 161 31.1
BcaC06g32344 Brassica carinata HOM05D008733 ORTHO05D010810 5.9e-06 55.1 147 27.2
BolC9t59802H Brassica oleracea HOM05D008733 ORTHO05D010810 5.9e-06 55.1 147 26.5
Thhalv10027229m.g Eutrema salsugineum HOM05D000307 ORTHO05D000166 5.9e-06 55.1 152 26.3
Prupe.7G092900 Prunus persica HOM05D000307 ORTHO05D000166 5.9e-06 55.1 162 25.3
BraA05t22552Z Brassica rapa HOM05D000307 ORTHO05D000166 7.7e-06 54.7 157 29.9
Peaxi162Scf00006g00718 Petunia axillaris HOM05D007832 ORTHO05D009598 7.7e-06 54.7 93 36.6


User provided reference genes

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