Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1180.2 Capsicum annuum HOM05D000161 ORTHO05D000111 1.9e-62 242.3 119 100.0
PGSC0003DMG400027558 Solanum tuberosum HOM05D000161 ORTHO05D000111 3.7e-29 131.7 95 70.5
Sopen04g028730 Solanum pennellii HOM05D000161 ORTHO05D000111 2.6e-27 125.6 95 65.3
PGSC0003DMG400027539 Solanum tuberosum HOM05D000161 ORTHO05D000111 5.8e-27 124.4 95 66.3
Sopen04g028690 Solanum pennellii HOM05D000161 ORTHO05D000111 1.3e-26 123.2 95 65.3
PGSC0003DMG400027540 Solanum tuberosum HOM05D000161 ORTHO05D000111 1.7e-26 122.9 95 66.3
Nitab4.5_0006358g0050 Nicotiana tabacum HOM05D000161 ORTHO05D000111 2.2e-26 122.5 95 62.1
Nitab4.5_0000136g0050 Nicotiana tabacum HOM05D000161 ORTHO05D000111 6.5e-26 120.9 94 62.8
Peaxi162Scf00756g00005 Petunia axillaris HOM05D000161 ORTHO05D000111 1.9e-25 119.4 94 60.6
Solyc04g072490.4 Solanum lycopersicum HOM05D002951 ORTHO05D003257 1.9e-25 119.4 91 64.8
Nitab4.5_0000553g0030 Nicotiana tabacum HOM05D000161 ORTHO05D000111 1.6e-24 116.3 95 57.9
PGSC0003DMG400027538 Solanum tuberosum HOM05D000161 ORTHO05D000111 3.9e-23 111.7 95 58.9
Sopen12g005650 Solanum pennellii HOM05D000161 ORTHO05D000111 6.7e-23 110.9 95 60.0
Solyc12g010650.1 Solanum lycopersicum HOM05D000161 ORTHO05D000111 4.3e-22 108.2 95 58.9
Peaxi162Scf00756g00002 Petunia axillaris HOM05D000161 ORTHO05D000111 1.4e-20 103.2 95 53.7
CAN.G1791.4 Capsicum annuum HOM05D000161 ORTHO05D000111 4.1e-20 101.7 95 55.8
CAN.G1049.10 Capsicum annuum HOM05D000161 ORTHO05D000111 3.4e-19 98.6 94 52.1
PGSC0003DMG400027559 Solanum tuberosum HOM05D000161 ORTHO05D000111 4.5e-19 98.2 93 51.6
Solyc04g072520.3 Solanum lycopersicum HOM05D000161 ORTHO05D000111 2.9e-18 95.5 90 50.0
Peaxi162Scf00756g00015 Petunia axillaris HOM05D000161 ORTHO05D000111 3.8e-18 95.1 90 51.1
Sopen04g028720 Solanum pennellii HOM05D000161 ORTHO05D000111 3.8e-18 95.1 90 50.0
TAR625G1465 Trochodendron aralioides HOM05D000161 ORTHO05D000111 3.2e-17 92.0 90 47.8
Nitab4.5_0006044g0030 Nicotiana tabacum HOM05D000161 ORTHO05D000111 1.2e-16 90.1 70 60.0
Nitab4.5_0001307g0150 Nicotiana tabacum HOM05D000161 ORTHO05D000111 8.8e-15 84.0 64 65.6
CAN.G1791.3 Capsicum annuum HOM05D000161 ORTHO05D000111 4.3e-14 81.6 69 55.1
Dinv44717 Davidia involucrata HOM05D000161 ORTHO05D000111 2.2e-13 79.3 95 36.8
CAN.G1869.3 Capsicum annuum HOM05D000161 ORTHO05D000111 4.1e-12 75.1 95 37.9
Solyc04g072530.2 Solanum lycopersicum HOM05D000161 ORTHO05D000111 4.1e-12 75.1 50 74.0
Nitab4.5_0000553g0110 Nicotiana tabacum HOM05D000161 ORTHO05D000111 2.0e-11 72.8 95 31.6
Nitab4.5_0003942g0110 Nicotiana tabacum HOM05D000161 ORTHO05D000111 2.6e-11 72.4 66 51.5
CAN.G347.3 Capsicum annuum HOM05D000161 ORTHO05D000111 4.5e-11 71.6 79 48.1
Solyc04g051880.3 Solanum lycopersicum HOM05D000161 ORTHO05D000111 2.9e-10 68.9 80 42.5
PGSC0003DMG400016579 Solanum tuberosum HOM05D000161 ORTHO05D000111 3.8e-10 68.6 80 43.8
Sopen04g023210 Solanum pennellii HOM05D000161 ORTHO05D000111 5.0e-10 68.2 80 42.5
Peaxi162Scf00756g00017 Petunia axillaris HOM05D000161 ORTHO05D000111 8.5e-10 67.4 94 35.1
Nitab4.5_0024703g0020 Nicotiana tabacum HOM05D000161 ORTHO05D000111 1.1e-09 67.0 58 51.7
Potri.001G034500 Populus trichocarpa HOM05D000161 ORTHO05D000111 1.4e-09 66.6 93 37.6
PGSC0003DMG400027537 Solanum tuberosum HOM05D000161 ORTHO05D000111 2.5e-09 65.9 99 33.3
Solyc04g072500.1 Solanum lycopersicum HOM05D000161 ORTHO05D000111 7.2e-09 64.3 99 32.3
Sopen04g028700 Solanum pennellii HOM05D000161 ORTHO05D000111 7.2e-09 64.3 99 32.3
Nn7g37044 Nelumbo nucifera HOM05D000161 ORTHO05D000111 1.2e-08 63.5 103 35.0
Peaxi162Scf00405g00171 Petunia axillaris HOM05D000161 ORTHO05D000111 1.2e-08 63.5 51 51.0
Sc22g0004030 Simmondsia chinensis HOM05D000161 ORTHO05D000111 1.2e-08 63.5 98 32.7
PGSC0003DMG400007874 Solanum tuberosum HOM05D000161 ORTHO05D000111 1.6e-08 63.2 95 40.0
ATR0564G139 Amborella trichopoda HOM05D000161 ORTHO05D000111 2.1e-08 62.8 91 31.9
PGSC0003DMG400006304 Solanum tuberosum HOM05D000161 ORTHO05D000111 2.1e-08 62.8 98 31.6
Aqoxy2G00951 Aquilegia oxysepala HOM05D000161 ORTHO05D000111 3.6e-08 62.0 89 32.6
Lsat_1_v5_gn_9_43001 Lactuca sativa HOM05D000161 ORTHO05D000111 3.6e-08 62.0 100 36.0
Thecc.10G133900 Theobroma cacao HOM05D000161 ORTHO05D000111 3.6e-08 62.0 78 38.5
Thecc.10G133800 Theobroma cacao HOM05D000161 ORTHO05D000111 4.7e-08 61.6 78 42.3
Sopen04g028740 Solanum pennellii HOM05D000161 ORTHO05D000111 6.1e-08 61.2 117 29.1
ATR0564G406 Amborella trichopoda HOM05D000161 ORTHO05D000111 7.9e-08 60.8 91 30.8
ATR0780G001 Amborella trichopoda HOM05D000161 ORTHO05D000111 7.9e-08 60.8 91 29.7
PSO210G1994 Papaver somniferum HOM05D000161 ORTHO05D000111 7.9e-08 60.8 93 32.3
Sc17g0007190 Simmondsia chinensis HOM05D000161 ORTHO05D000111 1.0e-07 60.5 69 44.9
PSO447G0054 Papaver somniferum HOM05D000161 ORTHO05D000111 1.4e-07 60.1 93 31.2
Solyc04g072540.3 Solanum lycopersicum HOM05D000161 ORTHO05D000111 1.4e-07 60.1 117 29.1
MELO3C011829.2 Cucumis melo HOM05D000161 ORTHO05D000111 1.8e-07 59.7 78 39.7
Aqoxy4G02742 Aquilegia oxysepala HOM05D000161 ORTHO05D000111 2.3e-07 59.3 89 37.1
Nitab4.5_0004323g0050 Nicotiana tabacum HOM05D000161 ORTHO05D000111 2.3e-07 59.3 89 34.8
Peaxi162Scf00154g00229 Petunia axillaris HOM05D000161 ORTHO05D000111 2.3e-07 59.3 74 40.5
TAR636G3360 Trochodendron aralioides HOM05D000161 ORTHO05D000111 3.0e-07 58.9 92 29.3
Nn7g37039 Nelumbo nucifera HOM05D000161 ORTHO05D000111 3.9e-07 58.5 71 40.8
Peaxi162Scf00267g01227 Petunia axillaris HOM05D000161 ORTHO05D000111 3.9e-07 58.5 89 32.6
Sabra03G0140400 Salix brachista HOM05D000161 ORTHO05D000111 3.9e-07 58.5 93 35.5
Sed0008910 Sechium edule HOM05D000161 ORTHO05D000111 5.1e-07 58.2 84 38.1
TWI38G0956 Tripterygium wilfordii HOM05D000161 ORTHO05D000111 6.7e-07 57.8 71 45.1
EL10Ac8g20007 Beta vulgaris HOM05D000161 ORTHO05D000111 8.8e-07 57.4 93 23.7
Nitab4.5_0004233g0070 Nicotiana tabacum HOM05D000161 ORTHO05D000111 8.8e-07 57.4 89 33.7
Peaxi162Scf00267g01228 Petunia axillaris HOM05D000161 ORTHO05D000111 8.8e-07 57.4 67 38.8
CAN.G1869.1 Capsicum annuum HOM05D000161 ORTHO05D000111 1.1e-06 57.0 51 51.0
CsaV3_5G029590 Cucumis sativus L. HOM05D000161 ORTHO05D000111 1.1e-06 57.0 73 41.1
PSO801G0786 Papaver somniferum HOM05D000161 ORTHO05D000111 1.1e-06 57.0 93 33.3
Sabra03G0140100 Salix brachista HOM05D000161 ORTHO05D000111 1.5e-06 56.6 88 33.0
TAR623G1629 Trochodendron aralioides HOM05D000161 ORTHO05D000111 1.5e-06 56.6 80 35.0
Gohir.D01G115100 Gossypium hirsutum HOM05D000161 ORTHO05D000111 2.0e-06 56.2 90 31.1
Gohir.D04G129242 Gossypium hirsutum HOM05D000161 ORTHO05D000111 2.0e-06 56.2 90 31.1
PSO339G3280 Papaver somniferum HOM05D000161 ORTHO05D000111 2.0e-06 56.2 93 30.1
MBI08_g30810_MAGBIO Magnolia biondii HOM05D000161 ORTHO05D000111 2.6e-06 55.8 90 27.8
PSO339G3238 Papaver somniferum HOM05D000161 ORTHO05D000111 2.6e-06 55.8 93 31.2
THA.LOC104819066 Tarenaya hassleriana HOM05D000161 ORTHO05D000111 2.6e-06 55.8 92 26.1
Cc10_g06090 Coffea canephora HOM05D000161 ORTHO05D000111 3.3e-06 55.5 83 39.8
MBI15_g42791_MAGBIO Magnolia biondii HOM05D000161 ORTHO05D000111 3.3e-06 55.5 97 30.9
Sabra03G0140200 Salix brachista HOM05D000161 ORTHO05D000111 3.3e-06 55.5 110 32.7
SalBow7G2624 Salvia bowleyana HOM05D000161 ORTHO05D000111 3.3e-06 55.5 80 30.0
Gohir.D11G252900 Gossypium hirsutum HOM05D000161 ORTHO05D000111 4.4e-06 55.1 80 32.5
Gorai.007G271600 Gossypium raimondii HOM05D000161 ORTHO05D000111 4.4e-06 55.1 80 32.5
MBI15_g25776_MAGBIO Magnolia biondii HOM05D000161 ORTHO05D000111 4.4e-06 55.1 82 32.9
Nitab4.5_0001378g0060 Nicotiana tabacum HOM05D000161 ORTHO05D000111 5.7e-06 54.7 75 37.3
Nitab4.5_0010411g0020 Nicotiana tabacum HOM05D000161 ORTHO05D000111 5.7e-06 54.7 89 33.7
Potri.001G034933 Populus trichocarpa HOM05D000161 ORTHO05D000111 5.7e-06 54.7 76 35.5
Potri.003G190700 Populus trichocarpa HOM05D000161 ORTHO05D000111 5.7e-06 54.7 93 33.3
DCAR_001276 Daucus carota HOM05D000161 ORTHO05D000111 9.7e-06 53.9 111 23.4
Nn5g28520 Nelumbo nucifera HOM05D000161 ORTHO05D000111 9.7e-06 53.9 81 28.4
Sabra01G0168100 Salix brachista HOM05D000161 ORTHO05D000111 9.7e-06 53.9 79 35.4
Sabra03G0140300 Salix brachista HOM05D000161 ORTHO05D000111 9.7e-06 53.9 110 32.7
SalBow3G2363 Salvia bowleyana HOM05D000161 ORTHO05D000111 9.7e-06 53.9 73 34.2


User provided reference genes

Program Settings