Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1178.24 Capsicum annuum HOM05D006677 ORTHO05D008348 5.1e-37 157.1 75 100.0
CAN.G1178.20 Capsicum annuum HOM05D006677 ORTHO05D008348 3.6e-30 134.4 72 88.9
Solyc08g078440.3 Solanum lycopersicum HOM05D006677 ORTHO05D008348 4.1e-26 120.9 72 80.6
Sopen08g026930 Solanum pennellii HOM05D006677 ORTHO05D008348 4.1e-26 120.9 72 80.6
Peaxi162Scf00209g00130 Petunia axillaris HOM05D006677 ORTHO05D008348 2.6e-25 118.2 72 76.4
Nitab4.5_0001381g0100 Nicotiana tabacum HOM05D006677 ORTHO05D008348 1.0e-24 116.3 72 77.8
Nitab4.5_0002289g0120 Nicotiana tabacum HOM05D006677 ORTHO05D008348 6.1e-22 107.1 72 72.2
Haze_07944 Corylus avellana HOM05D006677 ORTHO05D008348 4.5e-17 90.9 70 58.6
Cfa012688 Carpinus fangiana HOM05D006677 ORTHO05D008348 2.2e-16 88.6 70 58.6
QL12p011426 Quercus lobata HOM05D006677 ORTHO05D008348 2.9e-16 88.2 68 57.4
Cc08_g12180 Coffea canephora HOM05D006677 ORTHO05D008348 3.8e-16 87.8 68 61.8
CiPaw.12G050300 Carya illinoinensis HOM05D006677 ORTHO05D008348 5.0e-16 87.4 68 58.8
Prupe.5G065400 Prunus persica HOM05D006677 ORTHO05D008348 5.0e-16 87.4 71 60.6
CANSAT21G0792 Cannabis sativa HOM05D006677 ORTHO05D008348 6.5e-16 87.0 71 53.5
GSVIVG01006275001 Vitis vinifera HOM05D006677 ORTHO05D000005 1.1e-15 86.3 72 52.8
Atru.chr9.1276 Acer truncatum HOM05D006677 ORTHO05D008348 1.9e-15 85.5 71 54.9
Actinidia10841 Actinidia chinensis HOM05D006677 ORTHO05D008348 1.9e-15 85.5 68 57.4
arahy.Tifrunner.gnm1.ann1.IBE8NF Arachis hypogaea HOM05D006677 ORTHO05D008348 5.5e-15 84.0 71 50.7
arahy.Tifrunner.gnm1.ann1.WU4RWF Arachis hypogaea HOM05D006677 ORTHO05D008348 5.5e-15 84.0 71 50.7
Ciclev10018892m.g Citrus clementina HOM05D006677 ORTHO05D008348 5.5e-15 84.0 73 53.4
VMungo0251G0668 Vigna mungo HOM05D006677 ORTHO05D008348 5.5e-15 84.0 72 52.8
Manes.01G083200 Manihot esculenta HOM05D006677 ORTHO05D008348 7.2e-15 83.6 72 52.8
Lj2C223G6 Lonicera japonica HOM05D006677 ORTHO05D008348 1.2e-14 82.8 70 55.7
Phvul.003G222500 Phaseolus vulgaris HOM05D006677 ORTHO05D008348 1.2e-14 82.8 70 54.3
Thecc.03G248200 Theobroma cacao HOM05D006677 ORTHO05D008348 1.2e-14 82.8 70 55.7
Lj4g0000262 Lotus japonicus HOM05D006677 ORTHO05D008348 2.1e-14 82.0 70 51.4
Lalb_Chr05g0221161 Lupinus albus HOM05D006677 ORTHO05D008348 2.1e-14 82.0 68 55.9
Medtr4g100700 Medicago truncatula HOM05D006677 ORTHO05D008348 2.1e-14 82.0 79 51.9
ECA233G6125 Erigeron canadensis HOM05D006677 ORTHO05D008348 3.6e-14 81.3 72 51.4
Oeu017057.2 Olea europaea HOM05D006677 ORTHO05D008348 3.6e-14 81.3 57 64.9
Hund14577 Selenicereus undatus HOM05D006677 ORTHO05D008348 3.6e-14 81.3 68 50.0
Eucgr.D02100 Eucalyptus grandis HOM05D006677 ORTHO05D008348 4.7e-14 80.9 67 55.2
Duzib205G2017 Durio zibethinus HOM05D006677 ORTHO05D008348 6.1e-14 80.5 72 51.4
DCAR_004983 Daucus carota HOM05D006677 ORTHO05D008348 8.0e-14 80.1 66 51.5
DCAR_004989 Daucus carota HOM05D006677 ORTHO05D008348 8.0e-14 80.1 66 51.5
CSS0006614 Camellia sinensis var. sinensis HOM05D006677 ORTHO05D008348 1.0e-13 79.7 68 52.9
CSS0025591 Camellia sinensis var. sinensis HOM05D006677 ORTHO05D008348 1.0e-13 79.7 68 52.9
Glyma.17G143800 Glycine max HOM05D006677 ORTHO05D008348 1.0e-13 79.7 71 52.1
DCAR_004974 Daucus carota HOM05D006677 ORTHO05D008348 1.4e-13 79.3 66 51.5
PGR031G0681 Punica granatum HOM05D006677 ORTHO05D008348 1.4e-13 79.3 70 45.7
SalBow6G5281 Salvia bowleyana HOM05D006677 ORTHO05D008348 1.4e-13 79.3 68 51.5
Sabra01G0125500 Salix brachista HOM05D006677 ORTHO05D008348 3.0e-13 78.2 70 52.9
TAR374G0600 Trochodendron aralioides HOM05D006677 ORTHO05D008348 3.0e-13 78.2 61 57.4
Cpa.g.sc3684.1 Carica papaya HOM05D006677 ORTHO05D008348 4.0e-13 77.8 72 51.4
DCAR_004986 Daucus carota HOM05D006677 ORTHO05D008348 4.0e-13 77.8 66 50.0
Nn6g33880 Nelumbo nucifera HOM05D006677 ORTHO05D008348 4.0e-13 77.8 64 53.1
Ca_21980_v3 Cicer arietinum L. HOM05D006677 ORTHO05D008348 5.2e-13 77.4 80 46.2
DCAR_004979 Daucus carota HOM05D006677 ORTHO05D008348 5.2e-13 77.4 67 47.8
MD06G1053300 Malus domestica HOM05D006677 ORTHO05D008348 5.2e-13 77.4 61 54.1
Manes.02G041400 Manihot esculenta HOM05D006677 ORTHO05D008348 5.2e-13 77.4 70 50.0
Migut.A01134 Erythranthe guttata HOM05D006677 ORTHO05D008348 6.8e-13 77.0 71 50.7
COL.COLO4_37128 Corchorus olitorius HOM05D006677 ORTHO05D008348 8.8e-13 76.6 72 48.6
vmacro14066 Vaccinium macrocarpon HOM05D006677 ORTHO05D008348 8.8e-13 76.6 68 51.5
Hma1.2p1_0316F.1_g122840 Hydrangea macrophylla HOM05D006677 ORTHO05D008348 2.0e-12 75.5 68 52.9
Rhsim07G0110800 Rhododendron simsii HOM05D006677 ORTHO05D008348 2.0e-12 75.5 68 55.9
Rhsim07G0111300 Rhododendron simsii HOM05D006677 ORTHO05D008348 2.0e-12 75.5 68 55.9
Sc22g0000980 Simmondsia chinensis HOM05D006677 ORTHO05D008348 2.0e-12 75.5 72 45.8
Potri.001G155800 Populus trichocarpa HOM05D006677 ORTHO05D008348 2.6e-12 75.1 70 51.4
MSTRG.12123 Avicennia marina HOM05D006677 ORTHO05D008348 3.4e-12 74.7 70 45.7
HanXRQChr16g0501081 Helianthus annuus HOM05D006677 ORTHO05D008348 3.4e-12 74.7 71 50.7
TPR.G37689 Trifolium pratense HOM05D006677 ORTHO05D008348 3.4e-12 74.7 79 45.6
Duzib068G0477 Durio zibethinus HOM05D006677 ORTHO05D008348 4.4e-12 74.3 70 50.0
unitig_21.g20314 Utricularia gibba HOM05D006677 ORTHO05D008348 4.4e-12 74.3 70 50.0
Psat4g072920 Pisum sativum HOM05D006677 ORTHO05D008348 5.7e-12 73.9 78 47.4
Aqoxy7G00821 Aquilegia oxysepala HOM05D006677 ORTHO05D008348 2.2e-11 72.0 67 49.3
Gohir.D12G218100 Gossypium hirsutum HOM05D006677 ORTHO05D008348 2.8e-11 71.6 70 47.1
Gorai.008G233700 Gossypium raimondii HOM05D006677 ORTHO05D008348 2.8e-11 71.6 70 47.1
SGA_v2.0_scaffold104G30177 Striga asiatica HOM05D006677 ORTHO05D008348 4.8e-11 70.9 71 52.1
MD04G1060300 Malus domestica HOM05D006677 ORTHO05D008348 6.3e-11 70.5 69 44.9
FAN13G0013 Fragaria x ananassa HOM05D006677 ORTHO05D008348 8.3e-11 70.1 64 54.7
FAN08G3018 Fragaria x ananassa HOM05D006677 ORTHO05D008348 1.1e-10 69.7 60 56.7
FAN18G1193 Fragaria x ananassa HOM05D006677 ORTHO05D008348 1.1e-10 69.7 60 56.7
FvH4_5g19410 Fragaria vesca HOM05D006677 ORTHO05D008348 1.4e-10 69.3 50 62.0
FAN04G1892 Fragaria x ananassa HOM05D006677 ORTHO05D008348 1.4e-10 69.3 50 62.0
RcHm_v2.0_Chr7g0203921 Rosa chinensis HOM05D006677 ORTHO05D008348 1.4e-10 69.3 58 58.6
CARHR173970 Cardamine hirsuta HOM05D006677 ORTHO05D008348 4.1e-10 67.8 62 46.8
Gohir.A12G215500 Gossypium hirsutum HOM05D006677 ORTHO05D008348 4.1e-10 67.8 70 45.7
TWI60G0317 Tripterygium wilfordii HOM05D006677 ORTHO05D008348 4.1e-10 67.8 66 56.1
Thhalv10000783m.g Eutrema salsugineum HOM05D006677 ORTHO05D008348 7.0e-10 67.0 69 47.8
AL8G10640 Arabidopsis lyrata HOM05D006677 ORTHO05D008348 1.6e-09 65.9 67 41.8
Lsat_1_v5_gn_6_18041 Lactuca sativa HOM05D006677 ORTHO05D008348 1.6e-09 65.9 39 69.2
Sp2g12115 Schrenkiella parvula HOM05D006677 ORTHO05D008348 5.9e-09 63.9 69 42.0
C07p31040 Brassica napus HOM05D006677 ORTHO05D008348 7.7e-09 63.5 67 47.8
BolC7t43648H Brassica oleracea HOM05D006677 ORTHO05D008348 7.7e-09 63.5 67 47.8
BcaC06g34255 Brassica carinata HOM05D006677 ORTHO05D008348 1.0e-08 63.2 67 47.8
Aa31sc151G40 Aethionema arabicum HOM05D006677 ORTHO05D008348 1.3e-08 62.8 73 39.7
A06p45110 Brassica napus HOM05D006677 ORTHO05D008348 1.3e-08 62.8 68 45.6
BraA06t27381Z Brassica rapa HOM05D006677 ORTHO05D008348 1.3e-08 62.8 68 45.6
BcaC06g31390 Brassica carinata HOM05D006677 ORTHO05D008348 1.7e-08 62.4 69 46.4
BcaC06g31392 Brassica carinata HOM05D006677 ORTHO05D008348 1.7e-08 62.4 69 46.4
HPP92_022463 Vanilla planifolia HOM05D006677 ORTHO05D008348 1.7e-08 62.4 56 53.6
AT5G47400 Arabidopsis thaliana HOM05D006677 ORTHO05D008348 2.2e-08 62.0 61 44.3
Ah.12g054330 Amaranthus hybridus HOM05D006677 ORTHO05D008348 3.8e-08 61.2 67 43.3
DCAR_004972 Daucus carota HOM05D006677 ORTHO05D008348 3.8e-08 61.2 58 48.3
Zm00001eb000330 Zea mays HOM05D006677 ORTHO05D008348 3.8e-08 61.2 60 40.0
EL10Ac5g12357 Beta vulgaris HOM05D006677 ORTHO05D008348 5.0e-08 60.8 67 40.3
Carub.0008s0038 Capsella rubella HOM05D006677 ORTHO05D008348 5.0e-08 60.8 68 45.6
AUR62019973 Chenopodium quinoa HOM05D006677 ORTHO05D008348 6.5e-08 60.5 35 68.6
THA.LOC104806670 Tarenaya hassleriana HOM05D006677 ORTHO05D008348 6.5e-08 60.5 62 37.1
AUR62007111 Chenopodium quinoa HOM05D006677 ORTHO05D008348 1.9e-07 58.9 67 40.3
CDE11G0086 Ceratophyllum demersum HOM05D006677 ORTHO05D008348 9.4e-07 56.6 59 42.4
ATR0057G118 Amborella trichopoda HOM05D006677 ORTHO05D008348 2.7e-06 55.1 37 59.5


User provided reference genes

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