Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1178.2 Capsicum annuum HOM05D008299 ORTHO05D010400 9.9e-24 112.5 51 100.0
CAN.G1298.15 Capsicum annuum HOM05D008299 ORTHO05D010400 2.4e-22 107.8 50 96.0
CAN.G343.2 Capsicum annuum HOM05D000445 ORTHO05D010400 5.4e-22 106.7 48 97.9
CAN.G1648.16 Capsicum annuum HOM05D008299 ORTHO05D010400 1.2e-21 105.5 50 94.0
CAN.G100.36 Capsicum annuum HOM05D008299 ORTHO05D010400 6.0e-21 103.2 50 92.0
CSS0008439 Camellia sinensis var. sinensis HOM05D008299 ORTHO05D010400 1.3e-20 102.1 48 91.7
CSS0021182 Camellia sinensis var. sinensis HOM05D008299 ORTHO05D010400 1.3e-20 102.1 48 91.7
CAN.G219.11 Capsicum annuum HOM05D000445 ORTHO05D010400 1.3e-20 102.1 48 93.8
CAN.G129.17 Capsicum annuum HOM05D008299 ORTHO05D010400 1.7e-20 101.7 50 92.0
Solyc11g021080.3 Solanum lycopersicum HOM05D008299 ORTHO05D010400 3.9e-20 100.5 48 91.7
CAN.G719.1 Capsicum annuum HOM05D008299 ORTHO05D010400 1.9e-19 98.2 50 86.0
Solyc01g017080.2 Solanum lycopersicum HOM05D008299 ORTHO05D010400 3.3e-19 97.4 48 91.7
Thhalv10003089m.g Eutrema salsugineum HOM05D008299 ORTHO05D010400 6.4e-15 83.2 38 92.1
Solyc02g011920.2 Solanum lycopersicum HOM05D000445 ORTHO05D000314 7.8e-13 76.3 36 91.7
ATCG00870 Arabidopsis thaliana HOM05D008299 ORTHO05D010400 5.1e-12 73.6 34 94.1
ATCG01270 Arabidopsis thaliana HOM05D008299 ORTHO05D010400 5.1e-12 73.6 34 94.1
BraSC48t46294Z Brassica rapa HOM05D008299 ORTHO05D010400 5.1e-12 73.6 34 94.1
BraSC48t46311Z Brassica rapa HOM05D008299 ORTHO05D010400 5.1e-12 73.6 34 94.1
BraSC48t46344Z Brassica rapa HOM05D008299 ORTHO05D010400 5.1e-12 73.6 34 94.1
BraSC54t46357Z Brassica rapa HOM05D008299 ORTHO05D010400 5.1e-12 73.6 34 94.1
CARHR282310 Cardamine hirsuta HOM05D008299 ORTHO05D010400 5.1e-12 73.6 34 94.1
CARHR282550 Cardamine hirsuta HOM05D008299 ORTHO05D010400 5.1e-12 73.6 34 94.1
Gohir.1Z050502 Gossypium hirsutum HOM05D008299 ORTHO05D010400 5.1e-12 73.6 34 94.1
Gohir.D02G117444 Gossypium hirsutum HOM05D008299 ORTHO05D010400 5.1e-12 73.6 34 94.1
Thhalv10012154m.g Eutrema salsugineum HOM05D008299 ORTHO05D010400 1.5e-11 72.0 34 91.2
C06p23160 Brassica napus HOM05D008299 ORTHO05D010400 1.3e-10 68.9 34 88.2
C09p24750 Brassica napus HOM05D008299 ORTHO05D010400 1.3e-10 68.9 34 88.2
BolSC29t60493H Brassica oleracea HOM05D008299 ORTHO05D010400 1.3e-10 68.9 34 88.2
BolSC29t60562H Brassica oleracea HOM05D008299 ORTHO05D010400 1.3e-10 68.9 34 88.2
BolSC37t60783H Brassica oleracea HOM05D008299 ORTHO05D010400 1.3e-10 68.9 34 88.2
BolSC44t60837H Brassica oleracea HOM05D008299 ORTHO05D010400 1.3e-10 68.9 34 88.2
BolSC45t60893H Brassica oleracea HOM05D008299 ORTHO05D010400 1.3e-10 68.9 34 88.2
BolSC49t61213H Brassica oleracea HOM05D008299 ORTHO05D010400 1.3e-10 68.9 34 88.2
BraSC103t45416Z Brassica rapa HOM05D008299 ORTHO05D010400 1.3e-10 68.9 34 88.2
BraSC103t45438Z Brassica rapa HOM05D008299 ORTHO05D010400 1.3e-10 68.9 34 88.2
BraSC138t45545Z Brassica rapa HOM05D008299 ORTHO05D010400 1.3e-10 68.9 34 88.2
BraSC143t45671Z Brassica rapa HOM05D008299 ORTHO05D010400 1.3e-10 68.9 34 88.2
BraSC25t45895Z Brassica rapa HOM05D008299 ORTHO05D010400 1.3e-10 68.9 34 88.2
BraSC58t46447Z Brassica rapa HOM05D008299 ORTHO05D010400 1.3e-10 68.9 34 88.2
BraSC59t46562Z Brassica rapa HOM05D008299 ORTHO05D010400 1.3e-10 68.9 34 88.2
BolC2t08923H Brassica oleracea HOM05D008299 ORTHO05D010400 1.6e-10 68.6 34 88.2
SGA_v2.0_scaffold379G50347 Striga asiatica HOM05D008299 ORTHO05D010400 1.4e-09 65.5 34 79.4
AL9U12040 Arabidopsis lyrata HOM05D008299 ORTHO05D010400 1.5e-08 62.0 29 89.7
Hma1.2p1_0005F.1_g004230 Hydrangea macrophylla HOM05D000083 ORTHO05D003582 1.7e-07 58.5 35 74.3


User provided reference genes

Program Settings