Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1175.16 Capsicum annuum HOM05D003626 ORTHO05D004255 0.0e+00 1449.9 757 100.0
PGSC0003DMG400015791 Solanum tuberosum HOM05D003626 ORTHO05D004255 0.0e+00 1105.9 758 78.0
Sopen03g004280 Solanum pennellii HOM05D003626 ORTHO05D004255 0.0e+00 1093.6 759 77.1
Solyc03g025440.3 Solanum lycopersicum HOM05D003626 ORTHO05D004255 0.0e+00 1086.6 759 76.5
Nitab4.5_0004439g0040 Nicotiana tabacum HOM05D003626 ORTHO05D004255 5.7e-301 1037.3 758 73.0
Peaxi162Scf00444g00425 Petunia axillaris HOM05D003626 ORTHO05D004255 3.2e-288 995.0 758 70.6
Nitab4.5_0000084g0130 Nicotiana tabacum HOM05D003626 ORTHO05D004255 7.0e-283 977.2 758 70.2
Nitab4.5_0001951g0040 Nicotiana tabacum HOM05D003626 ORTHO05D004255 2.1e-210 736.5 763 56.4
Nitab4.5_0000080g0130 Nicotiana tabacum HOM05D003626 ORTHO05D004255 2.4e-203 713.0 762 54.2
Lj1C1001T6 Lonicera japonica HOM05D003626 ORTHO05D004255 1.7e-164 583.9 793 47.7
Rhsim03G0188200 Rhododendron simsii HOM05D003626 ORTHO05D004255 2.8e-159 566.6 774 47.0
Actinidia25889 Actinidia chinensis HOM05D003626 ORTHO05D000962 7.0e-158 562.0 777 47.4
Solyc06g036060.4 Solanum lycopersicum HOM05D003626 ORTHO05D004255 2.9e-156 556.6 760 46.7
Dinv28414 Davidia involucrata HOM05D003626 ORTHO05D004255 6.8e-153 545.4 705 49.6
Sopen06g011810 Solanum pennellii HOM05D003626 ORTHO05D004255 1.3e-151 541.2 918 41.1
Cc02_g02700 Coffea canephora HOM05D003626 ORTHO05D004255 4.8e-151 539.3 778 46.5
vmacro06655 Vaccinium macrocarpon HOM05D003626 ORTHO05D004255 3.1e-150 536.6 786 46.2
GSVIVG01028908001 Vitis vinifera HOM05D003626 ORTHO05D004255 2.3e-148 530.4 785 44.7
Oeu004107.1 Olea europaea HOM05D003626 ORTHO05D004255 8.6e-148 528.5 805 43.5
Hma1.2p1_0227F.1_g095920 Hydrangea macrophylla HOM05D003626 ORTHO05D004255 8.9e-145 518.5 770 45.6
Cpa.g.sc107.76 Carica papaya HOM05D003626 ORTHO05D004255 9.2e-142 508.4 789 44.2
SalBow4G0890 Salvia bowleyana HOM05D003626 ORTHO05D004255 1.7e-140 504.2 773 45.3
TAR629G0048 Trochodendron aralioides HOM05D003626 ORTHO05D004255 2.3e-132 477.2 787 42.2
DCAR_020260 Daucus carota HOM05D003626 ORTHO05D004255 5.0e-132 476.1 765 43.1
Prupe.2G297500 Prunus persica HOM05D003626 ORTHO05D004255 1.5e-131 474.6 774 42.0
Cfa016262 Carpinus fangiana HOM05D003626 ORTHO05D004255 1.6e-130 471.1 778 42.3
Manes.14G024700 Manihot esculenta HOM05D003626 ORTHO05D004255 2.1e-130 470.7 781 42.1
MSTRG.27103 Avicennia marina HOM05D003626 ORTHO05D004255 6.2e-130 469.2 773 42.4
Manes.06G149800 Manihot esculenta HOM05D003626 ORTHO05D004255 1.1e-129 468.4 780 42.3
TWI23G0117 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 2.3e-129 467.2 776 41.6
RcHm_v2.0_Chr1g0377821 Rosa chinensis HOM05D003626 ORTHO05D004255 5.2e-129 466.1 773 43.3
HanXRQChr14g0462361 Helianthus annuus HOM05D003626 ORTHO05D004255 4.4e-128 463.0 765 42.1
Duzib084G0771 Durio zibethinus HOM05D003626 ORTHO05D004255 6.4e-127 459.1 779 42.1
Glyma.10G233400 Glycine max HOM05D003626 ORTHO05D004255 1.6e-125 454.5 774 42.1
Thecc.03G180000 Theobroma cacao HOM05D003626 ORTHO05D004255 6.0e-125 452.6 784 41.1
EL10Ac3g05599 Beta vulgaris HOM05D003626 ORTHO05D004255 2.1e-122 444.1 775 40.8
Nn6g33408 Nelumbo nucifera HOM05D003626 ORTHO05D004255 3.6e-122 443.4 769 40.2
Dinv35227 Davidia involucrata HOM05D003626 ORTHO05D004255 6.2e-122 442.6 552 51.1
Gohir.A12G256000 Gossypium hirsutum HOM05D003626 ORTHO05D004255 6.2e-122 442.6 778 41.0
Potri.015G146300 Populus trichocarpa HOM05D003626 ORTHO05D004255 1.4e-121 441.4 771 40.2
TWI39G1025 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 1.4e-121 441.4 776 39.9
Gorai.008G275600 Gossypium raimondii HOM05D003626 ORTHO05D004255 3.1e-121 440.3 777 40.8
TPR.G26995 Trifolium pratense HOM05D003626 ORTHO05D004255 1.2e-120 438.3 797 40.2
Phvul.007G072400 Phaseolus vulgaris HOM05D003626 ORTHO05D004255 3.4e-120 436.8 776 41.8
ECA238G3668 Erigeron canadensis HOM05D003626 ORTHO05D004255 7.5e-120 435.6 814 38.5
VMungo0720G1546 Vigna mungo HOM05D003626 ORTHO05D004255 1.7e-119 434.5 781 41.0
Oeu061653.1 Olea europaea HOM05D003626 ORTHO05D004255 6.4e-119 432.6 667 42.1
Aqoxy7G00296 Aquilegia oxysepala HOM05D003626 ORTHO05D004255 1.9e-118 431.0 784 39.3
Gorai.004G117900 Gossypium raimondii HOM05D003626 ORTHO05D004255 4.1e-118 429.9 762 40.9
CsaV3_3G017260 Cucumis sativus L. HOM05D003626 ORTHO05D004255 9.2e-118 428.7 784 40.7
Potri.012G143200 Populus trichocarpa HOM05D003626 ORTHO05D004255 1.2e-117 428.3 789 39.3
Haze_00014 Corylus avellana HOM05D003626 ORTHO05D004255 1.6e-117 427.9 837 39.7
MELO3C006924.2 Cucumis melo HOM05D003626 ORTHO05D004255 1.6e-117 427.9 781 40.3
Duzib068G0520 Durio zibethinus HOM05D003626 ORTHO05D004255 1.6e-117 427.9 769 41.6
Duzib205G1576 Durio zibethinus HOM05D003626 ORTHO05D004255 2.1e-117 427.6 760 41.6
arahy.Tifrunner.gnm1.ann1.TX8CZR Arachis hypogaea HOM05D003626 ORTHO05D004255 6.0e-117 426.0 780 39.9
Lsat_1_v5_gn_9_55160 Lactuca sativa HOM05D003626 ORTHO05D004255 7.8e-117 425.6 490 50.8
MD07G1273500 Malus domestica HOM05D003626 ORTHO05D004255 1.0e-116 425.2 759 39.9
Sabra15G0155500 Salix brachista HOM05D003626 ORTHO05D004255 1.0e-116 425.2 763 38.8
arahy.Tifrunner.gnm1.ann1.DJI5YQ Arachis hypogaea HOM05D003626 ORTHO05D004255 1.3e-116 424.9 780 39.9
MD01G1205100 Malus domestica HOM05D003626 ORTHO05D004255 1.7e-116 424.5 757 39.6
Psat6g197120 Pisum sativum HOM05D003626 ORTHO05D004255 3.0e-116 423.7 790 40.1
COL.COLO4_28044 Corchorus olitorius HOM05D003626 ORTHO05D004255 5.1e-116 422.9 780 40.1
Gohir.D12G257400 Gossypium hirsutum HOM05D003626 ORTHO05D004255 5.1e-116 422.9 770 40.4
Sed0000543 Sechium edule HOM05D003626 ORTHO05D004255 6.6e-116 422.5 775 40.1
Glyma.20G161000 Glycine max HOM05D003626 ORTHO05D004255 8.6e-116 422.2 775 41.2
Gohir.D08G110300 Gossypium hirsutum HOM05D003626 ORTHO05D004255 1.5e-115 421.4 760 40.1
Gohir.A08G098700 Gossypium hirsutum HOM05D003626 ORTHO05D004255 3.3e-115 420.2 762 40.2
Atru.chr1.420 Acer truncatum HOM05D003626 ORTHO05D004255 9.5e-115 418.7 785 40.3
PSO478G3353 Papaver somniferum HOM05D003626 ORTHO05D004255 3.6e-114 416.8 787 38.5
FAN03G0953 Fragaria x ananassa HOM05D003626 ORTHO05D004255 4.7e-114 416.4 766 41.5
MSTRG.82 Avicennia marina HOM05D003626 ORTHO05D004255 2.6e-112 410.6 722 41.0
PSO782G4415 Papaver somniferum HOM05D003626 ORTHO05D004255 2.6e-112 410.6 786 38.0
Medtr1g100810 Medicago truncatula HOM05D003626 ORTHO05D004255 3.4e-112 410.2 801 38.7
FvH4_7g29860 Fragaria vesca HOM05D003626 ORTHO05D004255 1.1e-110 405.2 766 41.0
Nn1g01542 Nelumbo nucifera HOM05D003626 ORTHO05D004255 1.4e-110 404.8 861 35.7
TAR636G1367 Trochodendron aralioides HOM05D003626 ORTHO05D004255 4.2e-110 403.3 752 37.6
Ca_10741_v3 Cicer arietinum L. HOM05D003626 ORTHO05D004255 9.2e-110 402.1 794 38.3
AUR62015951 Chenopodium quinoa HOM05D003626 ORTHO05D004255 4.3e-107 393.3 839 37.4
Migut.F00325 Erythranthe guttata HOM05D003626 ORTHO05D004255 4.3e-107 393.3 764 38.2
Glyma.16G181700 Glycine max HOM05D003626 ORTHO05D004255 1.2e-106 391.7 777 38.1
Lalb_Chr03g0034731 Lupinus albus HOM05D003626 ORTHO05D004255 1.2e-106 391.7 774 38.5
Lalb_Chr19g0130741 Lupinus albus HOM05D003626 ORTHO05D004255 6.2e-106 389.4 776 37.2
Hund04768 Selenicereus undatus HOM05D003626 ORTHO05D004255 4.0e-105 386.7 751 39.0
Migut.F01102 Erythranthe guttata HOM05D003626 ORTHO05D004255 9.0e-105 385.6 481 47.8
DCAR_029574 Daucus carota HOM05D003626 ORTHO05D004255 7.6e-104 382.5 785 37.3
CiPaw.05G264100 Carya illinoinensis HOM05D003626 ORTHO05D004255 1.7e-103 381.3 611 42.9
Ah.07g206910 Amaranthus hybridus HOM05D003626 ORTHO05D004255 4.9e-103 379.8 499 49.5
PGR042G2663 Punica granatum HOM05D003626 ORTHO05D004255 4.2e-102 376.7 764 38.0
FAN01G0376 Fragaria x ananassa HOM05D003626 ORTHO05D004255 7.1e-102 375.9 774 39.1
Lalb_Chr06g0161221 Lupinus albus HOM05D003626 ORTHO05D004255 3.5e-101 373.6 790 37.1
SGA_v2.0_scaffold60G21078 Striga asiatica HOM05D003626 ORTHO05D004255 2.3e-100 370.9 754 37.9
TWI14G0197 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 3.0e-100 370.5 707 39.7
FAN10G0313 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.1e-99 368.6 767 39.0
Ciclev10006582m.g Citrus clementina HOM05D003626 ORTHO05D004255 2.5e-99 367.5 659 41.7
FAN10G2476 Fragaria x ananassa HOM05D003626 ORTHO05D004255 2.5e-99 367.5 766 38.6
AUR62021157 Chenopodium quinoa HOM05D003626 ORTHO05D004255 2.1e-98 364.4 776 37.8
Sc19g0001390 Simmondsia chinensis HOM05D003626 ORTHO05D004255 8.1e-98 362.5 730 38.1
ECA233G2749 Erigeron canadensis HOM05D003626 ORTHO05D004255 9.0e-97 359.0 421 50.6
arahy.Tifrunner.gnm1.ann1.26FV7C Arachis hypogaea HOM05D003626 ORTHO05D004255 1.2e-96 358.6 777 36.3
FAN03G3125 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.5e-96 358.2 774 38.0
ClCG05G008170 Citrullus lanatus HOM05D003626 ORTHO05D004255 2.6e-96 357.5 891 35.4
Sabra12G0107600 Salix brachista HOM05D003626 ORTHO05D004255 5.8e-96 356.3 793 36.1
arahy.Tifrunner.gnm1.ann1.7Y9ZSE Arachis hypogaea HOM05D003626 ORTHO05D004255 1.1e-94 352.1 764 36.8
Phvul.004G113400 Phaseolus vulgaris HOM05D003626 ORTHO05D004255 2.7e-93 347.4 773 35.7
Lj5g0006318 Lotus japonicus HOM05D003626 ORTHO05D004255 3.5e-93 347.1 821 37.3
CANSAT21G2257 Cannabis sativa HOM05D003626 ORTHO05D004255 3.9e-92 343.6 774 34.6
Lalb_Chr02g0141141 Lupinus albus HOM05D003626 ORTHO05D004255 6.7e-92 342.8 638 38.4
FAN06G2167 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.9e-91 341.3 582 42.8
Peaxi162Scf00848g00116 Petunia axillaris HOM05D003626 ORTHO05D004255 3.3e-91 340.5 323 60.4
ATR0680G428 Amborella trichopoda HOM05D003626 ORTHO05D004255 2.2e-87 327.8 429 45.7
Lj2g0008392 Lotus japonicus HOM05D003626 ORTHO05D004255 2.3e-84 317.8 775 33.5
Sed0014313 Sechium edule HOM05D003626 ORTHO05D004255 8.7e-84 315.8 793 35.4
A03p56130 Brassica napus HOM05D003626 ORTHO05D004255 1.9e-83 314.7 745 34.6
TPR.G8172 Trifolium pratense HOM05D003626 ORTHO05D004255 1.9e-83 314.7 522 42.0
PGR142G2556 Punica granatum HOM05D003626 ORTHO05D004255 9.6e-83 312.4 767 33.5
PGSC0003DMG400029919 Solanum tuberosum HOM05D003626 ORTHO05D004255 3.7e-82 310.5 511 42.1
BraA03t14686Z Brassica rapa HOM05D003626 ORTHO05D004255 9.0e-81 305.8 742 34.1
unitig_22.g5223 Utricularia gibba HOM05D003626 ORTHO05D004255 7.6e-80 302.8 480 42.7
C07p54460 Brassica napus HOM05D003626 ORTHO05D004255 1.7e-79 301.6 744 34.8
BolC7t45931H Brassica oleracea HOM05D003626 ORTHO05D004255 4.6e-77 293.5 744 33.6
HPP92_001476 Vanilla planifolia HOM05D003626 ORTHO05D004255 7.9e-77 292.7 519 39.1
AT4G25610 Arabidopsis thaliana HOM05D003626 ORTHO05D004255 3.0e-76 290.8 746 33.5
AL7G27480 Arabidopsis lyrata HOM05D003626 ORTHO05D004255 8.7e-76 289.3 746 33.4
Carub.0007s1537 Capsella rubella HOM05D003626 ORTHO05D004255 1.5e-75 288.5 746 32.8
Eucgr.L00411 Eucalyptus grandis HOM05D003626 ORTHO05D004255 1.3e-74 285.4 298 52.0
unitig_0.g459 Utricularia gibba HOM05D003626 ORTHO05D004255 1.3e-74 285.4 675 35.1
Thhalv10024755m.g Eutrema salsugineum HOM05D003626 ORTHO05D004255 1.6e-74 285.0 747 32.4
CDE06G1616 Ceratophyllum demersum HOM05D003626 ORTHO05D004255 3.7e-74 283.9 472 39.6
TAR375G0013 Trochodendron aralioides HOM05D003626 ORTHO05D004255 1.1e-73 282.3 278 56.8
CARHR233030 Cardamine hirsuta HOM05D003626 ORTHO05D004255 1.4e-73 282.0 750 32.3
Sp7g23640 Schrenkiella parvula HOM05D003626 ORTHO05D004255 1.4e-73 282.0 745 31.9
THA.LOC104811971 Tarenaya hassleriana HOM05D003626 ORTHO05D004255 4.1e-73 280.4 462 40.9
THA.LOC104825103 Tarenaya hassleriana HOM05D003626 ORTHO05D004255 1.2e-72 278.9 657 34.9
C01p21150 Brassica napus HOM05D003626 ORTHO05D004255 2.6e-72 277.7 750 32.4
BcaC06g32796 Brassica carinata HOM05D003626 ORTHO05D004255 3.4e-72 277.3 751 32.0
A01p16870 Brassica napus HOM05D003626 ORTHO05D004255 1.0e-71 275.8 753 32.3
Psat0s4127g0040 Pisum sativum HOM05D003626 ORTHO05D004255 1.3e-71 275.4 720 35.1
Aa31LG3G8800 Aethionema arabicum HOM05D003626 ORTHO05D004255 4.2e-70 270.4 480 39.6
Medtr6g053660 Medicago truncatula HOM05D003626 ORTHO05D004255 1.4e-68 265.4 773 33.2
BcaNung03703 Brassica carinata HOM05D003626 ORTHO05D004255 2.3e-68 264.6 749 31.6
BcaC09g50754 Brassica carinata HOM05D003626 ORTHO05D004255 2.2e-66 258.1 749 31.5
Os09g0570200 Oryza sativa ssp. japonica HOM05D003626 ORTHO05D004255 1.9e-62 245.0 435 39.5
CDE02G1538 Ceratophyllum demersum HOM05D003626 ORTHO05D004255 5.5e-62 243.4 775 31.1
SEGI_20458 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 3.6e-61 240.7 449 37.0
Zm00001eb095880 Zea mays HOM05D003626 ORTHO05D004255 1.8e-60 238.4 438 37.7
VMungo0464G2114 Vigna mungo HOM05D003626 ORTHO05D002946 3.0e-60 237.7 382 40.1
FAN06G1666 Fragaria x ananassa HOM05D003626 ORTHO05D004255 4.8e-58 230.3 761 32.1
Eucgr.A02765 Eucalyptus grandis HOM05D003626 ORTHO05D004255 1.1e-57 229.2 339 42.8
Eucgr.E00978 Eucalyptus grandis HOM05D003626 ORTHO05D004255 4.1e-57 227.3 298 45.3
SMO347G0135 Selaginella moellendorffii HOM05D003626 ORTHO05D004255 2.2e-55 221.5 457 35.9
Sc13g0008850 Simmondsia chinensis HOM05D003626 ORTHO05D004255 1.1e-54 219.2 323 42.4
Mapoly0003s0245 Marchantia polymorpha HOM05D003626 ORTHO05D004255 3.9e-52 210.7 372 37.6
CSS0041965 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 1.2e-45 189.1 141 69.5
CSS0005394 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 3.6e-45 187.6 504 34.1
CSS0037833 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 2.0e-43 181.8 142 69.0
HPP92_011473 Vanilla planifolia HOM05D003626 ORTHO05D004255 4.8e-42 177.2 204 53.9
Lalb_Chr21g0305131 Lupinus albus HOM05D003626 ORTHO05D004255 2.4e-41 174.9 568 32.4
Zm00001eb224460 Zea mays HOM05D003626 ORTHO05D004255 7.5e-35 153.3 212 44.8
Pp3c10_4090 Physcomitrium patens HOM05D003626 ORTHO05D004255 1.7e-34 152.1 207 45.4
SMO356G0700 Selaginella moellendorffii HOM05D003626 ORTHO05D004255 7.7e-32 143.3 267 36.0
AagrBONN_evm.TU.Sc2ySwM_344.1743 Anthoceros agrestis HOM05D003626 ORTHO05D004255 4.7e-29 134.0 321 31.2
SEGI_33334 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 5.2e-28 130.6 239 33.5
SEGI_03018 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 3.5e-24 117.9 199 42.7
Glyma.09G136202 Glycine max HOM05D003626 ORTHO05D004255 1.0e-20 106.3 150 48.0
MBI17_g24687_MAGBIO Magnolia biondii HOM05D003626 ORTHO05D004255 1.0e-20 106.3 514 28.6
TAR375G0355 Trochodendron aralioides HOM05D003626 ORTHO05D004255 6.6e-15 87.0 63 68.3
ECA233G5443 Erigeron canadensis HOM05D003626 ORTHO05D004255 1.6e-13 82.4 63 63.5
Rhsim05G0045800 Rhododendron simsii HOM05D003626 ORTHO05D004255 4.7e-13 80.9 377 30.2
Pp3c10_4110 Physcomitrium patens HOM05D003626 ORTHO05D004255 3.1e-12 78.2 82 54.9
MBI18_g29423_MAGBIO Magnolia biondii HOM05D003626 ORTHO05D004255 5.2e-12 77.4 793 24.0
Oeu035062.1 Olea europaea HOM05D003626 ORTHO05D004255 1.5e-11 75.9 214 29.9
TAR636G0984 Trochodendron aralioides HOM05D003626 ORTHO05D004255 9.8e-11 73.2 45 71.1
Ca_13872_v3 Cicer arietinum L. HOM05D003626 ORTHO05D004255 1.3e-10 72.8 517 26.9
HPP92_028446 Vanilla planifolia HOM05D003626 ORTHO05D004255 6.4e-10 70.5 121 41.3
AagrBONN_evm.TU.Sc2ySwM_362.2615 Anthoceros agrestis HOM05D003626 ORTHO05D004255 2.3e-07 62.0 138 32.6
HPP92_001477 Vanilla planifolia HOM05D003626 ORTHO05D004255 5.6e-06 57.4 53 52.8
HPP92_001484 Vanilla planifolia HOM05D003626 ORTHO05D004255 5.6e-06 57.4 52 57.7
TAR375G0736 Trochodendron aralioides HOM05D003626 ORTHO05D004255 9.5e-06 56.6 88 40.9


User provided reference genes

Program Settings