Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1173.8 Capsicum annuum HOM05D005991 ORTHO05D007408 2.2e-133 479.2 277 100.0
Sopen04g029760 Solanum pennellii HOM05D005991 ORTHO05D007408 1.6e-115 419.9 274 84.3
PGSC0003DMG400030844 Solanum tuberosum HOM05D005991 ORTHO05D007408 2.0e-115 419.5 274 85.4
Solyc04g074800.3 Solanum lycopersicum HOM05D005991 ORTHO05D007408 5.6e-113 411.4 277 84.1
Nitab4.5_0003374g0080 Nicotiana tabacum HOM05D005991 ORTHO05D007408 1.2e-112 410.2 274 82.1
Nitab4.5_0013885g0020 Nicotiana tabacum HOM05D005991 ORTHO05D007408 4.3e-105 385.2 262 80.5
Peaxi162Scf00139g00312 Petunia axillaris HOM05D005991 ORTHO05D007408 2.3e-98 362.8 267 79.8
Dinv05101 Davidia involucrata HOM05D005991 ORTHO05D007408 1.4e-76 290.4 249 67.5
Oeu009727.1 Olea europaea HOM05D005991 ORTHO05D007408 3.9e-74 282.3 262 64.1
CSS0003210 Camellia sinensis var. sinensis HOM05D005991 ORTHO05D007408 8.7e-74 281.2 260 61.9
Migut.I00898 Erythranthe guttata HOM05D005991 ORTHO05D007408 1.0e-69 267.7 275 57.8
Lj9A696T49 Lonicera japonica HOM05D005991 ORTHO05D007408 1.7e-69 266.9 257 61.9
MSTRG.22639 Avicennia marina HOM05D005991 ORTHO05D007408 2.1e-67 260.0 258 62.0
MBI18_g36460_MAGBIO Magnolia biondii HOM05D005991 ORTHO05D007408 1.1e-65 254.2 274 56.6
SGA_v2.0_scaffold66G22528 Striga asiatica HOM05D002451 ORTHO05D005601 9.6e-65 251.1 264 58.7
Actinidia28298 Actinidia chinensis HOM05D005991 ORTHO05D007408 2.1e-64 250.0 239 61.9
GSVIVG01017637001 Vitis vinifera HOM05D005991 ORTHO05D007408 6.3e-64 248.4 258 58.5
EL10Ac2g02410 Beta vulgaris HOM05D005991 ORTHO05D007408 1.4e-63 247.3 250 59.2
Rhsim02G0001600 Rhododendron simsii HOM05D005991 ORTHO05D007408 1.2e-62 244.2 256 59.0
Eucgr.H04085 Eucalyptus grandis HOM05D005991 ORTHO05D007408 2.6e-62 243.0 265 56.2
TAR362G0621 Trochodendron aralioides HOM05D005991 ORTHO05D007408 7.6e-62 241.5 262 57.3
Cfa015696 Carpinus fangiana HOM05D005991 ORTHO05D007408 6.5e-61 238.4 261 58.2
ECA234G0222 Erigeron canadensis HOM05D005991 ORTHO05D007408 1.4e-60 237.3 248 61.7
PGR004G0142 Punica granatum HOM05D005991 ORTHO05D007408 1.9e-60 236.9 235 62.1
Haze_00826 Corylus avellana HOM05D005991 ORTHO05D007408 2.5e-60 236.5 261 57.5
TAR633G0953 Trochodendron aralioides HOM05D005991 ORTHO05D007408 2.5e-60 236.5 250 59.2
vmacro19301 Vaccinium macrocarpon HOM05D005991 ORTHO05D007408 3.2e-60 236.1 242 61.2
DCAR_019078 Daucus carota HOM05D005991 ORTHO05D007408 7.2e-60 235.0 264 56.1
Lsat_1_v5_gn_4_27741 Lactuca sativa HOM05D005991 ORTHO05D007408 7.2e-60 235.0 242 60.7
unitig_32.g11589 Utricularia gibba HOM05D005991 ORTHO05D007408 1.0e-58 231.1 256 57.4
RcHm_v2.0_Chr4g0426321 Rosa chinensis HOM05D005991 ORTHO05D007408 1.3e-58 230.7 257 58.0
Sc23g0006090 Simmondsia chinensis HOM05D005991 ORTHO05D007408 5.1e-58 228.8 251 56.2
Cc10_g13510 Coffea canephora HOM05D005991 ORTHO05D007408 8.7e-58 228.0 266 56.0
HanXRQChr16g0526201 Helianthus annuus HOM05D005991 ORTHO05D007408 8.7e-58 228.0 243 60.5
Glyma.07G232800 Glycine max HOM05D005991 ORTHO05D007408 1.9e-57 226.9 240 56.2
Aqoxy7G00454 Aquilegia oxysepala HOM05D005991 ORTHO05D007408 9.7e-57 224.6 276 53.6
CsaV3_6G000060 Cucumis sativus L. HOM05D005991 ORTHO05D007408 9.7e-57 224.6 266 54.5
MD13G1147500 Malus domestica HOM05D005991 ORTHO05D007408 9.7e-57 224.6 287 52.3
ClCG06G004330 Citrullus lanatus HOM05D005991 ORTHO05D007408 3.7e-56 222.6 267 53.9
FAN17G2933 Fragaria x ananassa HOM05D005991 ORTHO05D007408 3.7e-56 222.6 255 56.9
Lj4g0017646 Lotus japonicus HOM05D005991 ORTHO05D007408 1.1e-55 221.1 237 58.6
MELO3C021248.2 Cucumis melo HOM05D005991 ORTHO05D007408 1.8e-55 220.3 235 58.7
Nn3g21864 Nelumbo nucifera HOM05D005991 ORTHO05D007408 1.8e-55 220.3 249 54.2
FvH4_4g20890 Fragaria vesca HOM05D005991 ORTHO05D007408 2.4e-55 219.9 255 56.1
Lalb_Chr13g0298761 Lupinus albus HOM05D005991 ORTHO05D007408 2.4e-55 219.9 263 53.2
Cc00_g31090 Coffea canephora HOM05D005991 ORTHO05D007408 3.1e-55 219.5 263 56.7
QL06p013384 Quercus lobata HOM05D005991 ORTHO05D007408 9.0e-55 218.0 263 54.8
Os01g0328500 Oryza sativa ssp. japonica HOM05D005991 ORTHO05D007408 2.6e-54 216.5 276 49.6
Sed0009947 Sechium edule HOM05D005991 ORTHO05D007408 3.4e-54 216.1 235 56.6
FAN07G2713 Fragaria x ananassa HOM05D005991 ORTHO05D007408 4.5e-54 215.7 275 53.5
FAN12G0391 Fragaria x ananassa HOM05D005991 ORTHO05D007408 4.5e-54 215.7 265 54.7
Medtr4g123060 Medicago truncatula HOM05D005991 ORTHO05D007408 4.5e-54 215.7 228 55.3
Actinidia18486 Actinidia chinensis HOM05D005991 ORTHO05D007408 1.7e-53 213.8 240 55.8
Manes.03G209000 Manihot esculenta HOM05D005991 ORTHO05D007408 5.0e-53 212.2 237 57.4
Phvul.003G118700 Phaseolus vulgaris HOM05D005991 ORTHO05D007408 8.5e-53 211.5 240 57.1
Psat0s2692g0080 Pisum sativum HOM05D005991 ORTHO05D007408 1.4e-52 210.7 234 54.3
HPP92_017296 Vanilla planifolia HOM05D005991 ORTHO05D007408 1.4e-52 210.7 240 55.0
Prupe.1G111000 Prunus persica HOM05D005991 ORTHO05D007408 3.2e-52 209.5 256 57.4
VMungo1215G0582 Vigna mungo HOM05D005991 ORTHO05D007408 5.5e-52 208.8 242 52.5
Potri.010G151300 Populus trichocarpa HOM05D005991 ORTHO05D007408 7.2e-52 208.4 254 52.0
Glyma.17G037800 Glycine max HOM05D005991 ORTHO05D007408 1.6e-51 207.2 240 55.0
TPR.G12610 Trifolium pratense HOM05D005991 ORTHO05D007408 2.1e-51 206.8 239 53.1
Ciclev10005452m.g Citrus clementina HOM05D005991 ORTHO05D007408 6.1e-51 205.3 312 47.8
Ah.11g042100 Amaranthus hybridus HOM05D005991 ORTHO05D007408 7.9e-51 204.9 248 52.0
Ca_21401_v3 Cicer arietinum L. HOM05D005991 ORTHO05D007408 1.0e-50 204.5 258 49.2
THA.LOC104827106 Tarenaya hassleriana HOM05D005991 ORTHO05D007408 1.1e-49 201.1 220 54.5
TWI73G0156 Tripterygium wilfordii HOM05D005991 ORTHO05D007408 4.3e-49 199.1 258 51.9
Zm00001eb131050 Zea mays HOM05D005991 ORTHO05D007408 5.7e-49 198.7 232 53.0
CANSAT78G1707 Cannabis sativa HOM05D005991 ORTHO05D007408 3.7e-48 196.1 253 53.0
Atru.chr4.3094 Acer truncatum HOM05D005991 ORTHO05D007408 4.8e-48 195.7 253 52.2
arahy.Tifrunner.gnm1.ann1.ELD4MI Arachis hypogaea HOM05D005991 ORTHO05D007408 6.3e-48 195.3 248 53.6
arahy.Tifrunner.gnm1.ann1.5JMV2K Arachis hypogaea HOM05D005991 ORTHO05D007408 1.1e-47 194.5 248 53.2
TWI09G0093 Tripterygium wilfordii HOM05D005991 ORTHO05D007408 5.3e-47 192.2 239 53.6
ATR0693G149 Amborella trichopoda HOM05D005991 ORTHO05D007408 1.2e-46 191.0 252 50.4
TWI53G1476 Tripterygium wilfordii HOM05D005991 ORTHO05D007408 1.2e-46 191.0 258 50.4
MD16G1145900 Malus domestica HOM05D005991 ORTHO05D007408 5.9e-46 188.7 230 54.8
Gohir.A02G056400 Gossypium hirsutum HOM05D005991 ORTHO05D007408 7.7e-46 188.3 287 46.0
Zm00001eb340570 Zea mays HOM05D005991 ORTHO05D007408 7.7e-46 188.3 222 55.9
Gohir.D02G061600 Gossypium hirsutum HOM05D005991 ORTHO05D007408 1.0e-45 188.0 287 46.0
Gorai.005G069300 Gossypium raimondii HOM05D005991 ORTHO05D007408 1.0e-45 188.0 288 45.8
Aa31LG11G8380 Aethionema arabicum HOM05D005991 ORTHO05D007408 1.3e-45 187.6 249 49.8
CiPaw.01G133100 Carya illinoinensis HOM05D005991 ORTHO05D007408 2.2e-45 186.8 188 63.8
AUR62020284 Chenopodium quinoa HOM05D005991 ORTHO05D007408 2.2e-45 186.8 248 48.0
Cpa.g.sc146.66 Carica papaya HOM05D005991 ORTHO05D007408 3.8e-45 186.0 226 54.0
A09p05050 Brassica napus HOM05D005991 ORTHO05D007408 1.1e-44 184.5 246 48.0
BraA09t36144Z Brassica rapa HOM05D005991 ORTHO05D007408 1.1e-44 184.5 246 48.0
AT5G30490 Arabidopsis thaliana HOM05D005991 ORTHO05D007408 1.4e-44 184.1 227 51.1
BolC7t44538H Brassica oleracea HOM05D005991 ORTHO05D007408 3.2e-44 183.0 223 52.9
COL.COLO4_34551 Corchorus olitorius HOM05D005991 ORTHO05D007408 5.5e-44 182.2 157 68.8
BcaB04g19640 Brassica carinata HOM05D005991 ORTHO05D007408 7.2e-44 181.8 246 48.4
C09p05460 Brassica napus HOM05D005991 ORTHO05D007408 7.2e-44 181.8 243 47.7
AL6G41020 Arabidopsis lyrata HOM05D005991 ORTHO05D007408 9.4e-44 181.4 227 52.4
AUR62037721 Chenopodium quinoa HOM05D005991 ORTHO05D007408 1.2e-43 181.0 248 47.2
Sp2g19950 Schrenkiella parvula HOM05D005991 ORTHO05D007408 1.2e-43 181.0 226 50.4
BcaNung02118 Brassica carinata HOM05D005991 ORTHO05D007408 1.6e-43 180.6 223 52.0
C07p40040 Brassica napus HOM05D005991 ORTHO05D007408 1.6e-43 180.6 223 52.0
Carub.0020s0004 Capsella rubella HOM05D005991 ORTHO05D007408 1.6e-43 180.6 230 49.1
Sp6g09550 Schrenkiella parvula HOM05D005991 ORTHO05D007408 4.7e-43 179.1 256 46.9
BcaC04g23714 Brassica carinata HOM05D005991 ORTHO05D007408 7.9e-43 178.3 243 47.3
Duzib151G0057 Durio zibethinus HOM05D005991 ORTHO05D007408 1.0e-42 177.9 223 52.9
BraA06t26732Z Brassica rapa HOM05D005991 ORTHO05D007408 1.8e-42 177.2 243 49.4
PSO017G0870 Papaver somniferum HOM05D005991 ORTHO05D007408 1.8e-42 177.2 244 50.0
Thecc.04G307900 Theobroma cacao HOM05D005991 ORTHO05D007408 2.3e-42 176.8 320 42.5
A06p38170 Brassica napus HOM05D005991 ORTHO05D007408 5.2e-42 175.6 243 49.0
CARHR185530 Cardamine hirsuta HOM05D005991 ORTHO05D007408 6.7e-42 175.3 235 49.8
BolC9t53475H Brassica oleracea HOM05D005991 ORTHO05D007408 1.5e-41 174.1 264 44.7
PSO675G8194 Papaver somniferum HOM05D005991 ORTHO05D007408 1.7e-40 170.6 280 44.6
arahy.Tifrunner.gnm1.ann1.KWD76U Arachis hypogaea HOM05D005991 ORTHO05D007408 3.1e-39 166.4 247 46.6
Thhalv10004825m.g Eutrema salsugineum HOM05D005991 ORTHO05D007408 1.1e-36 157.9 226 46.9
PGR119G0116 Punica granatum HOM05D005991 ORTHO05D007408 1.6e-35 154.1 123 68.3
BcaC06g30693 Brassica carinata HOM05D005991 ORTHO05D007408 3.3e-33 146.4 231 45.9
SEGI_07358 Sequoiadendron giganteum HOM05D005991 ORTHO05D007408 3.3e-33 146.4 249 41.0
CDE05G0304 Ceratophyllum demersum HOM05D005991 ORTHO05D007408 2.2e-32 143.7 179 53.6
Mapoly0030s0047 Marchantia polymorpha HOM05D005991 ORTHO05D007408 7.7e-30 135.2 273 39.2
CSS0020858 Camellia sinensis var. sinensis HOM05D005991 ORTHO05D007408 5.5e-28 129.0 138 56.5
arahy.Tifrunner.gnm1.ann1.FWR109 Arachis hypogaea HOM05D005991 ORTHO05D007408 1.8e-23 114.0 142 52.1
AagrBONN_evm.TU.Sc2ySwM_117.1275 Anthoceros agrestis HOM05D005991 ORTHO05D007408 2.7e-22 110.2 148 48.6
Cre14.g632600 Chlamydomonas reinhardtii HOM05D005991 ORTHO05D007408 1.7e-21 107.5 147 44.9
Pp3c5_15500 Physcomitrium patens HOM05D005991 ORTHO05D007408 1.6e-19 100.9 261 33.3
SMO203G0019 Selaginella moellendorffii HOM05D005991 ORTHO05D007408 3.0e-18 96.7 246 34.6
CBR_g56129 Chara braunii HOM05D005991 ORTHO05D007408 4.0e-18 96.3 141 44.0
Actinidia31584 Actinidia chinensis HOM05D005991 ORTHO05D007408 6.3e-16 89.0 217 36.9
MCO08G234 Micromonas commoda HOM05D005991 ORTHO05D007408 2.1e-11 73.9 175 36.0
PRCOL_00003370 Prasinoderma coloniale HOM05D005991 ORTHO05D007408 4.7e-11 72.8 141 41.8
GSVIVG01017622001 Vitis vinifera HOM05D005991 ORTHO05D007408 7.0e-07 58.9 54 50.0


User provided reference genes

Program Settings