Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1171.1 Capsicum annuum HOM05D007819 ORTHO05D009848 2.9e-148 528.5 257 100.0
Nitab4.5_0007369g0010 Nicotiana tabacum HOM05D007819 ORTHO05D009848 2.7e-106 389.0 299 67.9
Sopen06g001100 Solanum pennellii HOM05D007819 ORTHO05D009848 5.7e-104 381.3 264 75.0
Solyc06g005100.3 Solanum lycopersicum HOM05D007819 ORTHO05D009848 4.6e-93 345.1 184 88.6
Nitab4.5_0000888g0180 Nicotiana tabacum HOM05D007819 ORTHO05D009848 1.1e-86 323.9 287 58.2
Peaxi162Scf00389g00619 Petunia axillaris HOM05D007819 ORTHO05D009848 7.0e-86 321.2 240 67.5
Cc01_g11630 Coffea canephora HOM05D007819 ORTHO05D009848 6.4e-79 298.1 247 61.9
Nn2g10668 Nelumbo nucifera HOM05D007819 ORTHO05D009848 2.1e-77 293.1 242 59.1
Oeu017391.1 Olea europaea HOM05D007819 ORTHO05D009848 2.1e-77 293.1 247 61.1
Nitab4.5_0000022g0250 Nicotiana tabacum HOM05D007819 ORTHO05D009848 2.7e-77 292.7 273 59.3
Manes.04G025500 Manihot esculenta HOM05D007819 ORTHO05D009848 8.6e-76 287.7 260 56.2
Duzib168G1088 Durio zibethinus HOM05D007819 ORTHO05D009848 1.9e-75 286.6 258 54.7
Ciclev10029813m.g Citrus clementina HOM05D007819 ORTHO05D009848 2.1e-74 283.1 213 63.8
Gohir.A09G105900 Gossypium hirsutum HOM05D007819 ORTHO05D009848 8.1e-74 281.2 239 59.4
COL.COLO4_25254 Corchorus olitorius HOM05D007819 ORTHO05D009848 1.4e-73 280.4 242 57.9
Gorai.006G121000 Gossypium raimondii HOM05D007819 ORTHO05D009848 1.4e-73 280.4 242 58.7
PSO339G1273 Papaver somniferum HOM05D007819 ORTHO05D009848 3.1e-73 279.3 246 58.9
Thecc.09G261200 Theobroma cacao HOM05D007819 ORTHO05D009848 4.0e-73 278.9 242 58.7
TAR623G0280 Trochodendron aralioides HOM05D007819 ORTHO05D009848 5.2e-73 278.5 244 58.6
PSO384G2242 Papaver somniferum HOM05D007819 ORTHO05D009848 8.9e-73 277.7 240 59.6
Cpa.g.sc318.6 Carica papaya HOM05D007819 ORTHO05D009848 1.2e-72 277.3 241 58.5
Migut.N02626 Erythranthe guttata HOM05D007819 ORTHO05D009848 4.4e-72 275.4 248 57.7
Atru.chr3.3713 Acer truncatum HOM05D007819 ORTHO05D009848 9.9e-72 274.2 252 54.4
CANSAT54G2163 Cannabis sativa HOM05D007819 ORTHO05D009848 8.4e-71 271.2 251 58.2
Gohir.D09G102600 Gossypium hirsutum HOM05D007819 ORTHO05D009848 8.4e-71 271.2 232 59.1
RcHm_v2.0_Chr5g0060991 Rosa chinensis HOM05D007819 ORTHO05D009848 1.2e-69 267.3 242 57.9
PGR102G1079 Punica granatum HOM05D007819 ORTHO05D009848 6.0e-69 265.0 230 57.8
TWI75G0698 Tripterygium wilfordii HOM05D007819 ORTHO05D009848 6.0e-69 265.0 239 56.5
Lsat_1_v5_gn_2_25861 Lactuca sativa HOM05D007819 ORTHO05D009848 3.9e-68 262.3 231 55.8
FAN21G3467 Fragaria x ananassa HOM05D007819 ORTHO05D009848 8.6e-68 261.2 232 57.8
MSTRG.12613 Avicennia marina HOM05D007819 ORTHO05D009848 3.3e-67 259.2 177 66.1
CiPaw.13G106200 Carya illinoinensis HOM05D007819 ORTHO05D009848 4.3e-67 258.8 237 54.4
MD11G1124900 Malus domestica HOM05D007819 ORTHO05D009848 5.6e-67 258.5 247 53.4
CiPaw.14G077600 Carya illinoinensis HOM05D007819 ORTHO05D009848 9.6e-67 257.7 268 51.9
FAN25G2530 Fragaria x ananassa HOM05D007819 ORTHO05D009848 1.2e-66 257.3 232 57.3
Eucgr.B02464 Eucalyptus grandis HOM05D007819 ORTHO05D009848 2.8e-66 256.1 229 57.2
GSVIVG01025124001 Vitis vinifera HOM05D007819 ORTHO05D009848 4.7e-66 255.4 179 67.0
Hma1.2p1_2033F.1_g311900 Hydrangea macrophylla HOM05D007819 ORTHO05D009848 1.8e-65 253.4 232 54.7
Prupe.6G093600 Prunus persica HOM05D007819 ORTHO05D009848 1.8e-65 253.4 166 69.3
Dinv32800 Davidia involucrata HOM05D007819 ORTHO05D009848 4.0e-65 252.3 174 69.0
Gohir.D05G077600 Gossypium hirsutum HOM05D007819 ORTHO05D009848 4.0e-65 252.3 242 52.1
Gorai.009G079100 Gossypium raimondii HOM05D007819 ORTHO05D009848 4.0e-65 252.3 242 52.1
QL01p036876 Quercus lobata HOM05D007819 ORTHO05D009848 4.0e-65 252.3 249 51.4
Gohir.A05G074800 Gossypium hirsutum HOM05D007819 ORTHO05D009848 8.9e-65 251.1 242 52.1
Gohir.A05G074866 Gossypium hirsutum HOM05D007819 ORTHO05D009848 1.3e-63 247.3 242 51.7
MD03G1111000 Malus domestica HOM05D007819 ORTHO05D009848 6.4e-63 245.0 247 50.2
AUR62006507 Chenopodium quinoa HOM05D007819 ORTHO05D009848 9.3e-62 241.1 274 47.8
FAN16G1444 Fragaria x ananassa HOM05D007819 ORTHO05D009848 1.6e-61 240.4 163 66.9
DCAR_005475 Daucus carota HOM05D007819 ORTHO05D009848 4.6e-61 238.8 149 71.8
CiPaw.13G106300 Carya illinoinensis HOM05D007819 ORTHO05D009848 1.3e-60 237.3 262 49.2
Nitab4.5_0001578g0010 Nicotiana tabacum HOM05D007819 ORTHO05D009848 3.0e-60 236.1 313 46.0
Lj1A183T52 Lonicera japonica HOM05D007819 ORTHO05D009848 8.7e-60 234.6 230 53.9
unitig_699.g19198 Utricularia gibba HOM05D007819 ORTHO05D009848 2.5e-59 233.0 272 46.3
CiPaw.14G077700 Carya illinoinensis HOM05D007819 ORTHO05D009848 3.3e-59 232.6 231 51.1
Mapoly0103s0031 Marchantia polymorpha HOM05D007819 ORTHO05D009848 1.3e-55 220.7 224 49.6
HPP92_025075 Vanilla planifolia HOM05D007819 ORTHO05D009848 5.4e-54 215.3 249 43.8
Zm00001eb013150 Zea mays HOM05D007819 ORTHO05D009848 1.3e-50 204.1 240 45.0
Migut.O00707 Erythranthe guttata HOM05D007819 ORTHO05D009848 1.1e-49 201.1 119 71.4
FvH4_3g33520 Fragaria vesca HOM05D007819 ORTHO05D009848 2.2e-47 193.4 195 53.8
SGA_v2.0_scaffold2G00920 Striga asiatica HOM05D007819 ORTHO05D009848 2.9e-47 193.0 231 45.5
EL10Ac9g22426 Beta vulgaris HOM05D007819 ORTHO05D009848 3.2e-46 189.5 147 59.9
Sc21g0003720 Simmondsia chinensis HOM05D007819 ORTHO05D009848 5.5e-46 188.7 212 48.6
Haze_23935 Corylus avellana HOM05D007819 ORTHO05D009848 2.1e-42 176.8 200 50.0
PGSC0003DMG401025397 Solanum tuberosum HOM05D007819 ORTHO05D009848 1.2e-40 171.0 154 64.9
Pp3c21_1570 Physcomitrium patens HOM05D007819 ORTHO05D009848 5.5e-38 162.2 240 40.0
AagrBONN_evm.TU.Sc2ySwM_344.1297 Anthoceros agrestis HOM05D007819 ORTHO05D009848 6.7e-36 155.2 248 38.7
Pp3c9_23950 Physcomitrium patens HOM05D007819 ORTHO05D009848 1.9e-35 153.7 277 36.5
Mapoly0035s0019 Marchantia polymorpha HOM05D007819 ORTHO05D009848 3.3e-35 152.9 239 38.9
AagrBONN_evm.TU.Sc2ySwM_344.3840 Anthoceros agrestis HOM05D007819 ORTHO05D009848 5.7e-35 152.1 157 45.2
Mapoly0155s0016 Marchantia polymorpha HOM05D007819 ORTHO05D009848 7.4e-35 151.8 247 37.7
Pp3c15_22830 Physcomitrium patens HOM05D007819 ORTHO05D009848 7.4e-35 151.8 273 36.6
QL01p036758 Quercus lobata HOM05D007819 ORTHO05D009848 1.8e-33 147.1 93 71.0
Mapoly0008s0213 Marchantia polymorpha HOM05D007819 ORTHO05D009848 2.0e-32 143.7 239 37.2
Oeu012676.1 Olea europaea HOM05D007819 ORTHO05D009848 4.6e-29 132.5 74 78.4
Mapoly0088s0067 Marchantia polymorpha HOM05D000370 ORTHO05D001335 1.8e-28 130.6 165 38.2
Pp3c3_24540 Physcomitrium patens HOM05D007819 ORTHO05D009848 7.4e-27 125.2 140 42.1
AUR62025022 Chenopodium quinoa HOM05D007819 ORTHO05D009848 3.7e-26 122.9 205 39.5
Pp3c12_18930 Physcomitrium patens HOM05D000370 ORTHO05D009848 1.4e-25 120.9 146 38.4
Pp3c12_18938 Physcomitrium patens HOM05D000370 ORTHO05D009848 1.4e-25 120.9 146 38.4
EL10Ac9g22427 Beta vulgaris HOM05D007819 ORTHO05D009848 8.5e-07 58.5 101 38.6


User provided reference genes

Program Settings