Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G117.5 Capsicum annuum HOM05D006421 ORTHO05D008268 3.3e-282 974.9 731 100.0
Sopen08g011590 Solanum pennellii HOM05D006421 ORTHO05D008268 3.8e-185 652.5 740 72.0
Solyc08g022030.3 Solanum lycopersicum HOM05D006421 ORTHO05D008268 9.3e-184 647.9 740 70.9
PGSC0003DMG400004306 Solanum tuberosum HOM05D006421 ORTHO05D008268 4.6e-175 619.0 740 74.5
Nitab4.5_0002408g0020 Nicotiana tabacum HOM05D006421 ORTHO05D008268 3.6e-143 513.1 740 68.1
Nitab4.5_0002042g0070 Nicotiana tabacum HOM05D006421 ORTHO05D008268 3.4e-133 479.9 740 66.9
FAN20G2434 Fragaria x ananassa HOM05D006421 ORTHO05D008268 2.7e-114 417.2 737 55.0
Actinidia15670 Actinidia chinensis HOM05D006421 ORTHO05D008268 4.7e-111 406.4 732 52.7
FAN27G1287 Fragaria x ananassa HOM05D006421 ORTHO05D008268 4.0e-110 403.3 737 56.6
FAN15G0163 Fragaria x ananassa HOM05D006421 ORTHO05D008268 3.0e-105 387.1 737 54.5
FAN24G1512 Fragaria x ananassa HOM05D006421 ORTHO05D008268 3.5e-98 363.6 738 54.1
Eucgr.C01728 Eucalyptus grandis HOM05D006421 ORTHO05D008268 8.7e-97 359.0 737 50.2
Peaxi162Scf01131g00117 Petunia axillaris HOM05D006421 ORTHO05D008268 1.8e-94 351.3 735 58.4
AUR62031532 Chenopodium quinoa HOM05D006421 ORTHO05D008268 4.5e-93 346.7 732 47.1
FvH4_2g28941 Fragaria vesca HOM05D006421 ORTHO05D008268 2.1e-90 337.8 738 53.7
Cc08_g00500 Coffea canephora HOM05D006421 ORTHO05D008268 1.3e-89 335.1 718 53.5
GSVIVG01035871001 Vitis vinifera HOM05D006421 ORTHO05D008268 1.8e-89 334.7 738 56.1
Gorai.001G034500 Gossypium raimondii HOM05D006421 ORTHO05D008268 6.7e-89 332.8 752 47.1
Dinv08633 Davidia involucrata HOM05D006421 ORTHO05D008268 5.6e-88 329.7 734 54.8
Hma1.2p1_0243F.1_g100900 Hydrangea macrophylla HOM05D006421 ORTHO05D008268 9.0e-86 322.4 715 53.7
Gohir.A07G028900 Gossypium hirsutum HOM05D006421 ORTHO05D008268 1.1e-83 315.5 730 48.9
Migut.A00033 Erythranthe guttata HOM05D006421 ORTHO05D008268 2.4e-83 314.3 742 52.4
Gohir.D07G032900 Gossypium hirsutum HOM05D006421 ORTHO05D008268 5.5e-83 313.2 737 49.1
TWI34G1016 Tripterygium wilfordii HOM05D006421 ORTHO05D008268 1.6e-82 311.6 725 50.6
Duzib187G1366 Durio zibethinus HOM05D006421 ORTHO05D008268 2.1e-82 311.2 737 51.3
Duzib168G2139 Durio zibethinus HOM05D006421 ORTHO05D008268 1.3e-81 308.5 737 52.5
RcHm_v2.0_Chr6g0297771 Rosa chinensis HOM05D006421 ORTHO05D008268 1.6e-79 301.6 737 50.5
Oeu053117.1 Olea europaea HOM05D006421 ORTHO05D008268 1.1e-78 298.9 737 52.5
Lj8P705T28 Lonicera japonica HOM05D006421 ORTHO05D008268 1.8e-78 298.1 725 47.6
EL10Ac2g04201 Beta vulgaris HOM05D006421 ORTHO05D008268 4.0e-78 297.0 728 50.5
Manes.16G122900 Manihot esculenta HOM05D006421 ORTHO05D008268 5.3e-78 296.6 726 49.6
AT4G32190 Arabidopsis thaliana HOM05D006421 ORTHO05D008268 2.9e-76 290.8 726 47.9
Prupe.1G482200 Prunus persica HOM05D006421 ORTHO05D008268 2.9e-76 290.8 737 47.1
MSTRG.11610 Avicennia marina HOM05D006421 ORTHO05D008268 8.4e-76 289.3 739 52.2
Rhsim07G0159500 Rhododendron simsii HOM05D006421 ORTHO05D008268 5.5e-75 286.6 740 51.4
SGA_v2.0_scaffold20G09108 Striga asiatica HOM05D002695 ORTHO05D002964 3.9e-73 280.4 733 48.8
Potri.006G255800 Populus trichocarpa HOM05D006421 ORTHO05D008268 1.1e-72 278.9 736 51.0
vmacro05173 Vaccinium macrocarpon HOM05D006421 ORTHO05D008268 7.4e-72 276.2 720 51.2
DCAR_001538 Daucus carota HOM05D006421 ORTHO05D008268 9.7e-72 275.8 714 46.4
Cfa013134 Carpinus fangiana HOM05D006421 ORTHO05D008268 6.3e-71 273.1 738 52.4
Nn8g39522 Nelumbo nucifera HOM05D006421 ORTHO05D008268 2.4e-70 271.2 742 51.5
CiPaw.07G224100 Carya illinoinensis HOM05D006421 ORTHO05D008268 3.1e-70 270.8 738 46.9
Haze_21503 Corylus avellana HOM05D006421 ORTHO05D008268 1.2e-69 268.9 740 45.5
Thhalv10024464m.g Eutrema salsugineum HOM05D006421 ORTHO05D008268 5.0e-68 263.5 734 48.8
MD15G1126300 Malus domestica HOM05D006421 ORTHO05D008268 5.0e-68 263.5 725 45.8
SalBow4G3177 Salvia bowleyana HOM05D006421 ORTHO05D008268 1.1e-67 262.3 738 48.4
THA.LOC104818618 Tarenaya hassleriana HOM05D006421 ORTHO05D008268 1.6e-66 258.5 738 48.2
AL7G19640 Arabidopsis lyrata HOM05D006421 ORTHO05D008268 4.6e-66 256.9 725 46.9
Oeu033132.1 Olea europaea HOM05D006421 ORTHO05D008268 1.0e-65 255.8 733 49.0
QL02p021457 Quercus lobata HOM05D006421 ORTHO05D008268 5.1e-65 253.4 739 50.5
Hund04507 Selenicereus undatus HOM05D006421 ORTHO05D008268 8.7e-65 252.7 739 44.1
AUR62012410 Chenopodium quinoa HOM05D006421 ORTHO05D008268 1.5e-64 251.9 732 44.8
arahy.Tifrunner.gnm1.ann1.1F1BFK Arachis hypogaea HOM05D006421 ORTHO05D008268 9.7e-64 249.2 725 49.4
CANSAT35G0532 Cannabis sativa HOM05D006421 ORTHO05D008268 3.4e-61 240.7 719 52.6
ECA246G1400 Erigeron canadensis HOM05D002695 ORTHO05D002964 3.4e-61 240.7 724 48.3
Psat6g029040 Pisum sativum HOM05D006421 ORTHO05D008268 5.9e-61 240.0 728 50.1
Sp7g29980 Schrenkiella parvula HOM05D006421 ORTHO05D008268 5.9e-61 240.0 734 50.5
Sabra06G0200100 Salix brachista HOM05D006421 ORTHO05D008268 5.0e-60 236.9 736 49.2
TAR625G1222 Trochodendron aralioides HOM05D006421 ORTHO05D008268 8.8e-57 226.1 745 50.2
Actinidia14601 Actinidia chinensis HOM05D006421 ORTHO05D008268 1.5e-56 225.3 736 49.6
A01p06150 Brassica napus HOM05D006421 ORTHO05D008268 1.5e-56 225.3 452 48.5
CARHR240120 Cardamine hirsuta HOM05D006421 ORTHO05D008268 2.0e-56 224.9 459 50.8
COL.COLO4_18870 Corchorus olitorius HOM05D006421 ORTHO05D008268 3.3e-56 224.2 737 50.5
Thecc.09G023300 Theobroma cacao HOM05D006421 ORTHO05D008268 3.3e-56 224.2 501 46.3
Carub.0007s0836 Capsella rubella HOM05D006421 ORTHO05D008268 9.7e-56 222.6 719 45.9
Medtr1g012620 Medicago truncatula HOM05D006421 ORTHO05D008268 9.7e-56 222.6 727 51.0
HanXRQChr16g0510771 Helianthus annuus HOM05D006421 ORTHO05D008268 1.8e-54 218.4 720 46.9
C01p06780 Brassica napus HOM05D006421 ORTHO05D008268 3.1e-54 217.6 479 45.3
BolC1t00672H Brassica oleracea HOM05D006421 ORTHO05D008268 3.1e-54 217.6 479 45.3
TPR.G15679 Trifolium pratense HOM05D006421 ORTHO05D008268 3.1e-54 217.6 483 50.5
Phvul.001G050600 Phaseolus vulgaris HOM05D006421 ORTHO05D008268 5.3e-54 216.9 725 51.4
BcaNung03144 Brassica carinata HOM05D006421 ORTHO05D008268 1.5e-53 215.3 728 45.7
arahy.Tifrunner.gnm1.ann1.658XMK Arachis hypogaea HOM05D006421 ORTHO05D008268 2.2e-52 211.5 725 45.7
BcaC09g52004 Brassica carinata HOM05D006421 ORTHO05D008268 1.2e-50 205.7 470 45.1
Lj5g0021919 Lotus japonicus HOM05D006421 ORTHO05D008268 1.2e-50 205.7 740 48.0
VMungo0647G1945 Vigna mungo HOM05D006421 ORTHO05D008268 1.1e-48 199.1 725 49.9
Ciclev10007642m.g Citrus clementina HOM05D006421 ORTHO05D008268 1.5e-48 198.7 671 46.5
CSS0048874 Camellia sinensis var. sinensis HOM05D006421 ORTHO05D008268 4.4e-48 197.2 738 43.1
TAR636G3563 Trochodendron aralioides HOM05D006421 ORTHO05D008268 1.7e-47 195.3 478 51.3
PSO170G2190 Papaver somniferum HOM05D006421 ORTHO05D008268 3.7e-47 194.1 741 41.3
C02p24100 Brassica napus HOM05D006421 ORTHO05D008268 1.2e-45 189.1 445 47.9
Sc09g0008160 Simmondsia chinensis HOM05D006421 ORTHO05D008268 4.5e-45 187.2 530 43.6
ClCG05G016810 Citrullus lanatus HOM05D006421 ORTHO05D008268 2.9e-44 184.5 742 48.2
BcaC03g14918 Brassica carinata HOM05D006421 ORTHO05D008268 1.9e-43 181.8 394 48.7
PGR031G1896 Punica granatum HOM05D006421 ORTHO05D008268 4.2e-43 180.6 737 44.2
Sed0003255 Sechium edule HOM05D006421 ORTHO05D008268 3.6e-42 177.6 736 44.8
MELO3C003706.2 Cucumis melo HOM05D006421 ORTHO05D008268 6.1e-42 176.8 767 39.9
Cpa.g.sc217.10 Carica papaya HOM05D006421 ORTHO05D008268 1.3e-39 169.1 730 48.5
CSS0036831 Camellia sinensis var. sinensis HOM05D006421 ORTHO05D008268 4.8e-39 167.2 739 42.9
Lalb_Chr24g0402151 Lupinus albus HOM05D006421 ORTHO05D008268 9.1e-38 162.9 728 42.9
CsaV3_3G046330 Cucumis sativus L. HOM05D006421 ORTHO05D008268 1.2e-37 162.5 738 44.2
Ca_13033_v3 Cicer arietinum L. HOM05D006421 ORTHO05D008268 1.1e-35 156.0 720 42.8
PSO017G0123 Papaver somniferum HOM05D006421 ORTHO05D008268 9.8e-32 142.9 752 38.6
unitig_748.g8080 Utricularia gibba HOM05D006421 ORTHO05D008268 1.1e-30 139.4 712 44.7
Lsat_1_v5_gn_5_30240 Lactuca sativa HOM05D006421 ORTHO05D008268 3.1e-30 137.9 724 38.5
Glyma.17G211900 Glycine max HOM05D006421 ORTHO05D008268 8.6e-28 129.8 336 53.0
BraA10t43273Z Brassica rapa HOM05D006421 ORTHO05D008268 2.5e-27 128.3 214 38.3
FAN15G2294 Fragaria x ananassa HOM05D006421 ORTHO05D008268 2.1e-26 125.2 316 33.9
TAR636G0610 Trochodendron aralioides HOM05D006421 ORTHO05D008268 5.2e-25 120.6 134 57.5
Glyma.14G115951 Glycine max HOM05D006421 ORTHO05D008268 1.3e-23 115.9 186 44.1
Atru.chr7.2443 Acer truncatum HOM05D006421 ORTHO05D008268 1.8e-22 112.1 694 41.8
Potri.018G026300 Populus trichocarpa HOM05D006421 ORTHO05D008268 3.8e-20 104.4 426 30.0
Aa31LG2G17740 Aethionema arabicum HOM05D006421 ORTHO05D008268 8.6e-20 103.2 732 39.1
SEGI_00734 Sequoiadendron giganteum HOM05D006421 ORTHO05D008268 5.6e-19 100.5 773 34.2
Zm00001eb206500 Zea mays HOM05D006421 ORTHO05D008268 1.2e-16 92.8 717 35.3
ATR0800G069 Amborella trichopoda HOM05D006421 ORTHO05D008268 7.0e-14 83.6 105 51.4
FAN15G3016 Fragaria x ananassa HOM05D006421 ORTHO05D008268 2.0e-13 82.0 263 49.8
SEGI_28581 Sequoiadendron giganteum HOM05D006421 ORTHO05D008268 6.6e-12 77.0 454 35.5
C02p24000 Brassica napus HOM05D006421 ORTHO05D008268 3.3e-11 74.7 312 49.4
Os02g0186400 Oryza sativa ssp. japonica HOM05D006421 ORTHO05D008268 2.6e-08 65.1 101 42.6
Sabra18G0028800 Salix brachista HOM05D006421 ORTHO05D008268 7.5e-08 63.5 88 43.2
FAN15G3111 Fragaria x ananassa HOM05D006421 ORTHO05D008268 2.9e-07 61.6 78 51.3
CDE07G0223 Ceratophyllum demersum HOM05D006421 ORTHO05D008268 5.4e-06 57.4 171 27.5


User provided reference genes

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