Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1167.15 Capsicum annuum HOM05D002660 ORTHO05D013121 2.3e-74 282.0 126 100.0
CAN.G248.9 Capsicum annuum HOM05D002660 ORTHO05D003902 1.5e-52 209.5 111 80.2
Solyc00g500181.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 6.8e-42 174.1 118 61.0
CAN.G505.14 Capsicum annuum HOM05D000743 ORTHO05D000580 5.1e-37 157.9 125 64.0
Sed0016072 Sechium edule HOM05D002660 ORTHO05D003902 1.1e-31 140.2 123 50.4
CAN.G390.14 Capsicum annuum HOM05D001387 ORTHO05D001250 2.3e-29 132.5 71 81.7
arahy.Tifrunner.gnm1.ann1.2HU8EJ Arachis hypogaea HOM05D002660 ORTHO05D009622 5.8e-25 117.9 89 49.4
Solyc00g500227.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 6.4e-24 114.4 118 44.9
Solyc00g500350.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 6.4e-24 114.4 118 44.9
Sed0026029 Sechium edule HOM05D003467 ORTHO05D004220 4.2e-23 111.7 84 51.2
CAN.G85.22 Capsicum annuum HOM05D002660 ORTHO05D003902 1.0e-21 107.1 83 59.0
CAN.G1.4 Capsicum annuum HOM05D002660 ORTHO05D003902 2.3e-21 105.9 54 79.6
arahy.Tifrunner.gnm1.ann1.QE2SNE Arachis hypogaea HOM05D002660 ORTHO05D013121 2.8e-19 99.0 94 40.4
Sopen11g018230 Solanum pennellii HOM05D002660 ORTHO05D003902 7.9e-14 80.9 50 68.0
Cfa023009 Carpinus fangiana HOM05D002660 ORTHO05D013121 1.0e-13 80.5 124 30.6
arahy.Tifrunner.gnm1.ann1.KE43QT Arachis hypogaea HOM05D002660 ORTHO05D007974 5.1e-13 78.2 82 40.2
arahy.Tifrunner.gnm1.ann1.QE4HQU Arachis hypogaea HOM05D002660 ORTHO05D007974 5.1e-13 78.2 82 40.2
Actinidia34821 Actinidia chinensis HOM05D002660 ORTHO05D013121 8.7e-13 77.4 122 31.1
Sed0005389 Sechium edule HOM05D002660 ORTHO05D013121 1.9e-12 76.3 112 31.2
CAN.G1.22 Capsicum annuum HOM05D024148 ORTHO05D024823 2.8e-11 72.4 35 80.0
Actinidia34846 Actinidia chinensis HOM05D002660 ORTHO05D013121 8.1e-11 70.9 83 37.3
Dinv06709 Davidia involucrata HOM05D002660 ORTHO05D013121 6.9e-10 67.8 88 33.0
Actinidia11788 Actinidia chinensis HOM05D002660 ORTHO05D013121 1.5e-09 66.6 70 37.1
AT2G07691 Arabidopsis thaliana HOM05D037830 ORTHO05D013121 2.0e-09 66.2 74 35.1
ATMG01310 Arabidopsis thaliana HOM05D037830 ORTHO05D013121 2.0e-09 66.2 74 35.1
CARHR283500 Cardamine hirsuta HOM05D037830 ORTHO05D013121 2.0e-09 66.2 74 35.1
Sed0012925 Sechium edule HOM05D002660 ORTHO05D003902 4.5e-09 65.1 84 36.9
Gorai.001G162800 Gossypium raimondii HOM05D002660 ORTHO05D013121 1.3e-08 63.5 65 38.5
Medtr2154s0010 Medicago truncatula HOM05D002660 ORTHO05D013121 1.3e-08 63.5 65 38.5
Lsat_1_v5_gn_8_93880 Lactuca sativa HOM05D002660 ORTHO05D013121 2.7e-06 55.8 64 32.8
PGSC0003DMG400017709 Solanum tuberosum HOM05D066942 ORTHO05D051361 3.5e-06 55.5 32 65.6


User provided reference genes

Program Settings