Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1166.6 Capsicum annuum HOM05D000922 ORTHO05D008200 2.5e-110 402.1 206 100.0
PGSC0003DMG400018154 Solanum tuberosum HOM05D000922 ORTHO05D008200 5.1e-103 377.9 207 95.2
Solyc03g112810.3 Solanum lycopersicum HOM05D000922 ORTHO05D008200 3.6e-101 371.7 207 94.7
Nitab4.5_0000514g0030 Nicotiana tabacum HOM05D000922 ORTHO05D008200 7.6e-99 364.0 200 92.5
Sopen03g031890 Solanum pennellii HOM05D000922 ORTHO05D008200 4.2e-97 358.2 189 96.8
Nitab4.5_0008678g0030 Nicotiana tabacum HOM05D000922 ORTHO05D008200 7.9e-96 354.0 186 95.7
DCAR_026150 Daucus carota HOM05D000922 ORTHO05D008200 9.0e-92 340.5 195 87.7
Peaxi162Scf00089g01850 Petunia axillaris HOM05D000922 ORTHO05D008200 2.9e-90 335.5 206 87.4
MSTRG.11466 Avicennia marina HOM05D000922 ORTHO05D008200 8.7e-87 323.9 205 81.5
Dinv20636 Davidia involucrata HOM05D000922 ORTHO05D008200 4.3e-86 321.6 204 81.9
Atru.chr9.2496 Acer truncatum HOM05D000922 ORTHO05D008200 5.6e-86 321.2 205 80.5
Gohir.D09G167000 Gossypium hirsutum HOM05D000922 ORTHO05D008200 5.6e-86 321.2 204 81.9
Gorai.006G188800 Gossypium raimondii HOM05D000922 ORTHO05D008200 5.6e-86 321.2 204 81.9
COL.COLO4_30070 Corchorus olitorius HOM05D000922 ORTHO05D008200 7.4e-86 320.9 204 82.4
Gohir.A09G171300 Gossypium hirsutum HOM05D000922 ORTHO05D008200 1.3e-85 320.1 199 81.9
Eucgr.G00068 Eucalyptus grandis HOM05D000922 ORTHO05D008200 1.6e-85 319.7 197 82.2
Manes.14G064200 Manihot esculenta HOM05D000922 ORTHO05D008200 3.7e-85 318.5 202 80.2
CSS0000249 Camellia sinensis var. sinensis HOM05D000922 ORTHO05D008200 4.8e-85 318.2 205 81.5
Sabra15G0103100 Salix brachista HOM05D000922 ORTHO05D008200 4.8e-85 318.2 184 86.4
CiPaw.11G024500 Carya illinoinensis HOM05D000922 ORTHO05D008200 6.2e-85 317.8 205 81.0
Rhsim08G0173800 Rhododendron simsii HOM05D000922 ORTHO05D007418 3.1e-84 315.5 205 80.5
SalBow1G6106 Salvia bowleyana HOM05D000922 ORTHO05D008200 3.1e-84 315.5 195 80.5
SalBow5G5253 Salvia bowleyana HOM05D000922 ORTHO05D008200 3.1e-84 315.5 195 80.5
Cc04_g12150 Coffea canephora HOM05D000922 ORTHO05D008200 4.0e-84 315.1 205 80.0
Prupe.5G171600 Prunus persica HOM05D000922 ORTHO05D008200 9.0e-84 313.9 204 80.4
Potri.015G078600 Populus trichocarpa HOM05D000922 ORTHO05D008200 1.2e-83 313.5 195 82.1
Nn3g16820 Nelumbo nucifera HOM05D000922 ORTHO05D008200 1.5e-83 313.2 205 80.0
Lsat_1_v5_gn_5_15061 Lactuca sativa HOM05D000922 ORTHO05D008200 2.6e-83 312.4 199 80.4
Thecc.03G014600 Theobroma cacao HOM05D000922 ORTHO05D008200 2.6e-83 312.4 199 79.9
vmacro19401 Vaccinium macrocarpon HOM05D000922 ORTHO05D008200 3.4e-83 312.0 205 79.5
Aqoxy3G02881 Aquilegia oxysepala HOM05D000922 ORTHO05D008200 4.5e-83 311.6 203 78.3
TWI39G0231 Tripterygium wilfordii HOM05D000922 ORTHO05D008200 5.8e-83 311.2 201 80.1
Duzib205G0455 Durio zibethinus HOM05D000922 ORTHO05D008200 1.3e-82 310.1 187 84.5
CsaV3_1G008590 Cucumis sativus L. HOM05D000922 ORTHO05D008200 2.2e-82 309.3 206 78.2
RcHm_v2.0_Chr7g0193351 Rosa chinensis HOM05D000922 ORTHO05D008200 2.2e-82 309.3 204 78.9
ClCG01G013230 Citrullus lanatus HOM05D000922 ORTHO05D008200 2.9e-82 308.9 201 79.6
QL10p010977 Quercus lobata HOM05D000922 ORTHO05D008200 2.9e-82 308.9 201 78.6
VMungo1215G1163 Vigna mungo HOM05D000922 ORTHO05D008200 2.9e-82 308.9 196 80.6
CANSAT80G0818 Cannabis sativa HOM05D000922 ORTHO05D008200 3.8e-82 308.5 197 76.6
FAN04G0130 Fragaria x ananassa HOM05D000922 ORTHO05D008200 3.8e-82 308.5 200 79.0
FAN18G2418 Fragaria x ananassa HOM05D000922 ORTHO05D008200 3.8e-82 308.5 200 79.0
FAN18G3465 Fragaria x ananassa HOM05D000922 ORTHO05D008200 3.8e-82 308.5 200 79.0
FAN13G3248 Fragaria x ananassa HOM05D000922 ORTHO05D008200 6.5e-82 307.8 200 79.0
THA.LOC104818216 Tarenaya hassleriana HOM05D000922 ORTHO05D008200 6.5e-82 307.8 199 78.9
TAR629G0323 Trochodendron aralioides HOM05D000922 ORTHO05D008200 8.4e-82 307.4 205 76.6
MELO3C002273.2 Cucumis melo HOM05D000922 ORTHO05D008200 1.1e-81 307.0 206 77.2
Glyma.17G088100 Glycine max HOM05D000922 ORTHO05D008200 1.1e-81 307.0 196 80.6
Ciclev10022297m.g Citrus clementina HOM05D000922 ORTHO05D008200 1.9e-81 306.2 187 83.4
FvH4_5g05480 Fragaria vesca HOM05D000922 ORTHO05D008200 1.9e-81 306.2 200 78.5
GSVIVG01007722001 Vitis vinifera HOM05D000922 ORTHO05D008200 2.5e-81 305.8 205 77.6
Sed0005243 Sechium edule HOM05D000922 ORTHO05D008200 7.1e-81 304.3 204 78.4
arahy.Tifrunner.gnm1.ann1.RA2V7W Arachis hypogaea HOM05D000922 ORTHO05D008200 9.3e-81 303.9 196 78.6
Migut.O00114 Erythranthe guttata HOM05D000922 ORTHO05D008200 9.3e-81 303.9 194 79.9
Lj5C125T23 Lonicera japonica HOM05D000922 ORTHO05D008200 9.3e-81 303.9 200 78.5
Phvul.003G201800 Phaseolus vulgaris HOM05D000922 ORTHO05D008200 1.2e-80 303.5 192 80.2
SGA_v2.0_scaffold90G27896 Striga asiatica HOM05D000922 ORTHO05D008200 1.2e-80 303.5 191 81.7
MD14G1178100 Malus domestica HOM05D000922 ORTHO05D008200 2.7e-80 302.4 199 78.9
Hund09449 Selenicereus undatus HOM05D000922 ORTHO05D008200 2.7e-80 302.4 205 78.5
PGR044G1577 Punica granatum HOM05D000922 ORTHO05D008200 4.6e-80 301.6 197 78.2
MD06G1172200 Malus domestica HOM05D000922 ORTHO05D008200 6.0e-80 301.2 199 78.9
Aa31LG4G16810 Aethionema arabicum HOM05D002875 ORTHO05D003215 3.0e-79 298.9 195 78.5
Lj4g0019609 Lotus japonicus HOM05D000922 ORTHO05D008200 3.9e-79 298.5 204 74.5
AUR62013091 Chenopodium quinoa HOM05D000922 ORTHO05D008200 8.7e-79 297.4 188 80.3
unitig_0.g1435 Utricularia gibba HOM05D000922 ORTHO05D008200 8.7e-79 297.4 201 75.6
Ca_21935_v3 Cicer arietinum L. HOM05D000922 ORTHO05D008200 1.5e-78 296.6 204 73.5
Psat4g058400 Pisum sativum HOM05D000922 ORTHO05D008200 1.5e-78 296.6 202 73.8
Medtr4g105570 Medicago truncatula HOM05D000922 ORTHO05D008200 2.5e-78 295.8 202 74.8
AL8G40030 Arabidopsis lyrata HOM05D000922 ORTHO05D008200 5.7e-78 294.7 201 75.6
AUR62010095 Chenopodium quinoa HOM05D000922 ORTHO05D008200 7.4e-78 294.3 188 79.8
ECA246G4361 Erigeron canadensis HOM05D000922 ORTHO05D008200 7.4e-78 294.3 186 79.6
CARHR276810 Cardamine hirsuta HOM05D000922 ORTHO05D008200 9.7e-78 293.9 202 75.2
AT5G63000 Arabidopsis thaliana HOM05D000922 ORTHO05D008200 1.3e-77 293.5 202 74.8
Thhalv10004944m.g Eutrema salsugineum HOM05D000922 ORTHO05D008200 1.6e-77 293.1 202 75.2
BraA06t25925Z Brassica rapa HOM05D000922 ORTHO05D008200 2.8e-77 292.4 194 76.3
Carub.0008s2371 Capsella rubella HOM05D000922 ORTHO05D008200 2.8e-77 292.4 201 74.6
Lalb_Chr12g0201661 Lupinus albus HOM05D000922 ORTHO05D008200 2.8e-77 292.4 203 74.4
FAN08G1692 Fragaria x ananassa HOM05D000922 ORTHO05D008200 4.8e-77 291.6 221 71.0
A06p29780 Brassica napus HOM05D000922 ORTHO05D008200 1.1e-76 290.4 194 75.8
Sp2g26130 Schrenkiella parvula HOM05D000922 ORTHO05D008200 1.1e-76 290.4 194 76.3
BcaC01g02547 Brassica carinata HOM05D000922 ORTHO05D008200 2.4e-76 289.3 202 74.3
C03p63610 Brassica napus HOM05D000922 ORTHO05D008200 2.4e-76 289.3 202 74.3
BolC3t18619H Brassica oleracea HOM05D000922 ORTHO05D008200 2.4e-76 289.3 202 74.3
BcaB02g09714 Brassica carinata HOM05D000922 ORTHO05D008200 3.1e-76 288.9 203 73.9
MBI16_g39217_MAGBIO Magnolia biondii HOM05D000922 ORTHO05D008200 3.1e-76 288.9 225 69.3
arahy.Tifrunner.gnm1.ann1.R1G0J4 Arachis hypogaea HOM05D000922 ORTHO05D008200 6.9e-76 287.7 197 75.6
Haze_07527 Corylus avellana HOM05D000922 ORTHO05D008200 6.9e-76 287.7 186 80.6
PGR044G0925 Punica granatum HOM05D000922 ORTHO05D008200 6.9e-76 287.7 197 74.6
arahy.Tifrunner.gnm1.ann1.3C9G4H Arachis hypogaea HOM05D000922 ORTHO05D008200 1.5e-75 286.6 191 77.5
EL10Ac9g21439 Beta vulgaris HOM05D000922 ORTHO05D008200 3.4e-75 285.4 235 66.0
HPP92_011872 Vanilla planifolia HOM05D000922 ORTHO05D008200 1.7e-74 283.1 202 70.3
Actinidia04732 Actinidia chinensis HOM05D000922 ORTHO05D007418 1.4e-73 280.0 205 75.1
PSO832G1073 Papaver somniferum HOM05D000922 ORTHO05D008200 1.4e-73 280.0 205 71.2
Zm00001eb332970 Zea mays HOM05D000922 ORTHO05D008200 7.9e-72 274.2 200 69.0
CDE07G1875 Ceratophyllum demersum HOM05D000922 ORTHO05D008200 1.8e-71 273.1 164 82.3
Os01g0271000 Oryza sativa ssp. japonica HOM05D000922 ORTHO05D008200 3.9e-71 271.9 203 71.4
Dinv38572 Davidia involucrata HOM05D000922 ORTHO05D008200 4.3e-70 268.5 319 51.7
arahy.Tifrunner.gnm1.ann1.HJA5XH Arachis hypogaea HOM05D000922 ORTHO05D008200 1.2e-67 260.4 239 59.8
HanXRQChr05g0155781 Helianthus annuus HOM05D000922 ORTHO05D008200 2.6e-67 259.2 164 79.9
Sc04g0001730 Simmondsia chinensis HOM05D000922 ORTHO05D008200 6.5e-66 254.6 161 79.5
ATR1091G108 Amborella trichopoda HOM05D000922 ORTHO05D008200 4.8e-61 238.4 153 77.8
SHI38067 Sapria himalayana HOM05D000922 ORTHO05D008200 2.4e-60 236.1 194 65.5
Manes.05G195400 Manihot esculenta HOM05D000922 ORTHO05D008200 3.0e-55 219.2 132 83.3
Cfa019117 Carpinus fangiana HOM05D000922 ORTHO05D008200 6.3e-53 211.5 116 93.1
arahy.Tifrunner.gnm1.ann1.UWQ2W3 Arachis hypogaea HOM05D000922 ORTHO05D008200 1.3e-50 203.8 133 75.9
TAR371G0469 Trochodendron aralioides HOM05D000922 ORTHO05D008200 1.5e-49 200.3 132 76.5
arahy.Tifrunner.gnm1.ann1.PQAW0Q Arachis hypogaea HOM05D000922 ORTHO05D008200 4.2e-49 198.7 118 83.9
Oeu023435.1 Olea europaea HOM05D000922 ORTHO05D008200 5.5e-49 198.4 106 90.6
TPR.G37467 Trifolium pratense HOM05D000922 ORTHO05D008200 1.2e-48 197.2 127 78.7
EL10Ac5g12019 Beta vulgaris HOM05D000922 ORTHO05D008200 2.3e-47 193.0 122 77.9
SEGI_40590 Sequoiadendron giganteum HOM05D000922 ORTHO05D008200 8.8e-47 191.0 151 64.9
Glyma.05G038900 Glycine max HOM05D000922 ORTHO05D008200 1.4e-44 183.7 108 84.3
Peaxi162Scf00089g01839 Petunia axillaris HOM05D000922 ORTHO05D008200 1.0e-39 167.5 188 54.8
arahy.Tifrunner.gnm1.ann1.Q2CJ89 Arachis hypogaea HOM05D000922 ORTHO05D008200 9.8e-38 161.0 146 60.3
AagrBONN_evm.TU.Sc2ySwM_228.4800 Anthoceros agrestis HOM05D000922 ORTHO05D008200 1.2e-32 144.1 175 43.4
Mapoly0191s0008 Marchantia polymorpha HOM05D000922 ORTHO05D008200 1.0e-31 141.0 185 45.9
TPR.G11031 Trifolium pratense HOM05D000922 ORTHO05D008200 2.8e-29 132.9 91 72.5
SMO111G0048 Selaginella moellendorffii HOM05D000922 ORTHO05D008200 2.5e-25 119.8 138 45.7
arahy.Tifrunner.gnm1.ann1.JAVP2G Arachis hypogaea HOM05D000922 ORTHO05D008200 7.3e-25 118.2 133 49.6
Cpa.g.sc76.32 Carica papaya HOM05D000922 ORTHO05D008200 2.3e-23 113.2 190 40.5
Pp3c17_17380 Physcomitrium patens HOM05D000922 ORTHO05D008200 6.8e-23 111.7 143 42.7
CBR_g38960 Chara braunii HOM05D000922 ORTHO05D008200 9.8e-22 107.8 230 33.0
MCO04G383 Micromonas commoda HOM05D000922 ORTHO05D008200 3.0e-10 69.7 150 32.0
Medtr4g105580 Medicago truncatula HOM05D000922 ORTHO05D008200 1.2e-08 64.3 71 43.7
SGA_v2.0_scaffold25G11050 Striga asiatica HOM05D000922 ORTHO05D403871 2.8e-08 63.2 36 80.6
SGA_v2.0_scaffold116G32233 Striga asiatica HOM05D000922 ORTHO05D008200 1.4e-07 60.8 55 58.2
arahy.Tifrunner.gnm1.ann1.RUR1T0 Arachis hypogaea HOM05D000034 ORTHO05D000037 1.5e-06 57.4 41 68.3
TAR371G0726 Trochodendron aralioides HOM05D000922 ORTHO05D008200 2.0e-06 57.0 33 81.8


User provided reference genes

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