Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1166.3 Capsicum annuum HOM05D000922 ORTHO05D007418 0.0e+00 1936.0 1024 100.0
Sopen03g031910 Solanum pennellii HOM05D000922 ORTHO05D007418 0.0e+00 1517.7 983 81.0
Solyc03g112830.4 Solanum lycopersicum HOM05D000922 ORTHO05D007418 0.0e+00 1392.9 983 76.1
Peaxi162Scf00089g01840 Petunia axillaris HOM05D000922 ORTHO05D007418 0.0e+00 1268.1 960 70.7
Nitab4.5_0001514g0050 Nicotiana tabacum HOM05D000922 ORTHO05D007418 0.0e+00 1114.0 994 61.5
Peaxi162Scf00255g01019 Petunia axillaris HOM05D000922 ORTHO05D007418 0.0e+00 1088.2 994 60.2
Nitab4.5_0000025g0520 Nicotiana tabacum HOM05D000922 ORTHO05D007418 5.1e-244 848.6 993 50.2
Lj9A446G57 Lonicera japonica HOM05D000922 ORTHO05D007418 3.3e-235 819.3 897 52.6
Hma1.2p1_2469F.1_g322680 Hydrangea macrophylla HOM05D000922 ORTHO05D007418 1.2e-229 800.8 911 49.9
Cc04_g12110 Coffea canephora HOM05D000922 ORTHO05D007418 1.0e-228 797.7 877 51.9
Hma1.2p1_2165F.1_g315780 Hydrangea macrophylla HOM05D000922 ORTHO05D007418 5.1e-228 795.4 910 50.1
CSS0017974 Camellia sinensis var. sinensis HOM05D000922 ORTHO05D007418 4.0e-225 785.8 890 49.8
QL10p011002 Quercus lobata HOM05D000922 ORTHO05D007418 2.0e-224 783.5 965 46.8
GSVIVG01007724001 Vitis vinifera HOM05D000922 ORTHO05D007418 2.0e-224 783.5 940 48.1
MSTRG.23139 Avicennia marina HOM05D000922 ORTHO05D007418 3.9e-220 769.2 938 47.2
Rhsim08G0173800 Rhododendron simsii HOM05D000922 ORTHO05D007418 5.1e-220 768.8 887 47.5
Migut.O00098 Erythranthe guttata HOM05D000922 ORTHO05D007418 1.5e-219 767.3 861 49.5
CiPaw.11G024700 Carya illinoinensis HOM05D000922 ORTHO05D007418 8.1e-218 761.5 974 45.9
Cfa019149 Carpinus fangiana HOM05D000922 ORTHO05D007418 1.1e-217 761.1 977 46.1
Atru.chr9.2494 Acer truncatum HOM05D000922 ORTHO05D007418 4.0e-217 759.2 951 48.1
Thecc.03G014400 Theobroma cacao HOM05D000922 ORTHO05D007418 2.0e-216 756.9 921 48.6
Duzib205G1607 Durio zibethinus HOM05D000922 ORTHO05D007418 2.2e-215 753.4 920 48.6
Haze_07516 Corylus avellana HOM05D000922 ORTHO05D007418 2.1e-213 746.9 998 45.1
FvH4_5g05470 Fragaria vesca HOM05D000922 ORTHO05D007418 2.3e-212 743.4 911 48.1
MD06G1172500 Malus domestica HOM05D000922 ORTHO05D007418 2.3e-212 743.4 984 46.1
RcHm_v2.0_Chr7g0193371 Rosa chinensis HOM05D000922 ORTHO05D007418 1.5e-211 740.7 917 47.9
FAN18G1332 Fragaria x ananassa HOM05D000922 ORTHO05D007418 2.5e-211 740.0 915 48.1
SGA_v2.0_scaffold90G27900 Striga asiatica HOM05D000922 ORTHO05D007418 2.5e-211 740.0 894 47.1
TAR622G0946 Trochodendron aralioides HOM05D000922 ORTHO05D007418 5.6e-211 738.8 914 47.2
FAN08G1289 Fragaria x ananassa HOM05D000922 ORTHO05D007418 7.4e-211 738.4 911 48.4
Manes.14G064400 Manihot esculenta HOM05D000922 ORTHO05D007418 7.4e-211 738.4 989 45.1
DCAR_016480 Daucus carota HOM05D000922 ORTHO05D007418 3.7e-210 736.1 932 46.4
Gorai.008G296200 Gossypium raimondii HOM05D000922 ORTHO05D007418 4.8e-210 735.7 911 48.0
Gohir.D12G275700 Gossypium hirsutum HOM05D000922 ORTHO05D007418 2.4e-209 733.4 914 47.9
CANSAT80G2096 Cannabis sativa HOM05D000922 ORTHO05D007418 5.3e-209 732.3 914 47.3
SalBow5G3118 Salvia bowleyana HOM05D000922 ORTHO05D007418 1.5e-208 730.7 834 49.0
Potri.012G082500 Populus trichocarpa HOM05D000922 ORTHO05D007418 2.0e-208 730.3 920 47.0
TWI23G1000 Tripterygium wilfordii HOM05D000922 ORTHO05D007418 4.5e-208 729.2 891 46.7
SalBow5G1735 Salvia bowleyana HOM05D000922 ORTHO05D007418 1.7e-207 727.2 834 48.9
Prupe.5G171800 Prunus persica HOM05D000922 ORTHO05D007418 2.2e-207 726.9 972 46.1
FAN04G3074 Fragaria x ananassa HOM05D000922 ORTHO05D007418 1.1e-206 724.5 919 47.7
Sc04g0001750 Simmondsia chinensis HOM05D000922 ORTHO05D007418 1.0e-204 718.0 877 48.0
Oeu016401.1 Olea europaea HOM05D000922 ORTHO05D007418 1.1e-203 714.5 773 51.2
vmacro19399 Vaccinium macrocarpon HOM05D000922 ORTHO05D007418 3.3e-203 713.0 568 62.1
Duzib068G1349 Durio zibethinus HOM05D000922 ORTHO05D007418 2.1e-202 710.3 936 47.1
Ciclev10018588m.g Citrus clementina HOM05D000922 ORTHO05D007418 4.8e-202 709.1 971 44.7
Potri.015G078300 Populus trichocarpa HOM05D000922 ORTHO05D007418 8.2e-202 708.4 1011 43.3
Sabra12G0059200 Salix brachista HOM05D000922 ORTHO05D007418 5.8e-200 702.2 922 45.4
MD14G1178400 Malus domestica HOM05D000922 ORTHO05D007418 1.0e-199 701.4 1003 44.8
Eucgr.B00297 Eucalyptus grandis HOM05D000922 ORTHO05D007418 2.2e-199 700.3 1000 43.5
FAN13G2825 Fragaria x ananassa HOM05D000922 ORTHO05D007418 1.4e-198 697.6 1012 44.4
Sabra15G0102900 Salix brachista HOM05D000922 ORTHO05D007418 1.9e-198 697.2 999 43.0
FAN18G2587 Fragaria x ananassa HOM05D000922 ORTHO05D007418 2.5e-198 696.8 993 44.1
PGR083G1532 Punica granatum HOM05D000922 ORTHO05D007418 1.0e-196 691.4 946 43.8
Hund02754 Selenicereus undatus HOM05D000922 ORTHO05D007418 1.9e-195 687.2 885 46.2
Lsat_1_v5_gn_5_15041 Lactuca sativa HOM05D000922 ORTHO05D007418 4.3e-195 686.0 867 45.7
arahy.Tifrunner.gnm1.ann1.9TFG5W Arachis hypogaea HOM05D000922 ORTHO05D007418 4.8e-194 682.6 980 43.8
arahy.Tifrunner.gnm1.ann1.F0ZNJX Arachis hypogaea HOM05D000922 ORTHO05D007418 2.6e-192 676.8 980 43.5
Nn4g22714 Nelumbo nucifera HOM05D000922 ORTHO05D007418 3.4e-192 676.4 911 45.4
Aqoxy3G02884 Aquilegia oxysepala HOM05D000922 ORTHO05D007418 5.9e-192 675.6 868 46.4
Phvul.009G177300 Phaseolus vulgaris HOM05D000922 ORTHO05D007418 2.2e-191 673.7 865 45.5
TPR.G20687 Trifolium pratense HOM05D000922 ORTHO05D007418 3.8e-191 672.9 950 44.9
Psat0ss3962g0400 Pisum sativum HOM05D000922 ORTHO05D007418 5.5e-190 669.1 935 45.2
Ca_16166_v3 Cicer arietinum L. HOM05D000922 ORTHO05D007418 9.4e-190 668.3 983 44.0
HanXRQChr05g0155771 Helianthus annuus HOM05D000922 ORTHO05D007418 9.4e-190 668.3 872 46.1
ClCG06G017060 Citrullus lanatus HOM05D000922 ORTHO05D007418 3.6e-189 666.4 898 43.2
Glyma.04G184600 Glycine max HOM05D000922 ORTHO05D007418 1.8e-188 664.1 881 44.6
Lj1g0015886 Lotus japonicus HOM05D000922 ORTHO05D007418 5.1e-188 662.5 836 47.8
EL10Ac5g10730 Beta vulgaris HOM05D000922 ORTHO05D007418 1.5e-187 661.0 881 45.9
Lalb_Chr23g0273281 Lupinus albus HOM05D000922 ORTHO05D007418 5.7e-187 659.1 555 59.6
Glyma.06G181100 Glycine max HOM05D000922 ORTHO05D007418 4.8e-186 656.0 909 44.7
AT3G48195 Arabidopsis thaliana HOM05D000922 ORTHO05D007418 6.3e-186 655.6 851 45.8
CARHR156940 Cardamine hirsuta HOM05D000922 ORTHO05D007418 6.3e-186 655.6 953 42.3
AL5G27540 Arabidopsis lyrata HOM05D000922 ORTHO05D007418 1.1e-185 654.8 867 45.4
Thhalv10010097m.g Eutrema salsugineum HOM05D000922 ORTHO05D007418 1.1e-185 654.8 966 42.4
Sp5g13830 Schrenkiella parvula HOM05D000922 ORTHO05D007418 1.8e-185 654.1 966 42.3
Medtr3g077620 Medicago truncatula HOM05D000922 ORTHO05D007418 2.4e-185 653.7 977 43.7
AUR62008194 Chenopodium quinoa HOM05D000922 ORTHO05D007418 5.3e-185 652.5 925 43.5
BraA01t02462Z Brassica rapa HOM05D000922 ORTHO05D007418 2.2e-183 647.1 603 55.7
VMungo1309G1607 Vigna mungo HOM05D000922 ORTHO05D007418 2.2e-183 647.1 895 44.4
A01p25510 Brassica napus HOM05D000922 ORTHO05D007418 8.5e-183 645.2 603 55.6
Carub.0005s1432 Capsella rubella HOM05D000922 ORTHO05D007418 1.1e-182 644.8 948 43.1
BcaB05g22925 Brassica carinata HOM05D000922 ORTHO05D007418 1.4e-182 644.4 884 43.6
Aa31LG4G16800 Aethionema arabicum HOM05D000922 ORTHO05D007418 1.9e-182 644.0 920 42.3
BolC1t03155H Brassica oleracea HOM05D000922 ORTHO05D007418 7.2e-182 642.1 902 43.5
BcaC09g49852 Brassica carinata HOM05D000922 ORTHO05D007418 9.4e-182 641.7 899 43.6
AUR62030946 Chenopodium quinoa HOM05D000922 ORTHO05D007418 6.1e-181 639.0 876 44.4
PSO478G1387 Papaver somniferum HOM05D000922 ORTHO05D007418 2.3e-180 637.1 986 42.0
PSO017G6576 Papaver somniferum HOM05D000922 ORTHO05D007418 2.0e-179 634.0 915 43.6
unitig_26.g9619 Utricularia gibba HOM05D000922 ORTHO05D007418 3.3e-179 633.3 893 42.6
Ah.02g110580 Amaranthus hybridus HOM05D000922 ORTHO05D007418 4.4e-179 632.9 881 43.2
Sed0021678 Sechium edule HOM05D000922 ORTHO05D007418 3.7e-178 629.8 988 40.3
Dinv38573 Davidia involucrata HOM05D000922 ORTHO05D007418 1.7e-170 604.4 695 49.9
ATR1091G081 Amborella trichopoda HOM05D000922 ORTHO05D007418 2.2e-170 604.0 582 53.8
MELO3C017091.2 Cucumis melo HOM05D000922 ORTHO05D007418 1.4e-169 601.3 945 41.5
Os01g0549500 Oryza sativa ssp. japonica HOM05D000922 ORTHO05D007418 5.3e-169 599.4 587 53.3
THA.LOC104798972 Tarenaya hassleriana HOM05D000922 ORTHO05D007418 3.6e-165 586.6 832 45.4
HPP92_009707 Vanilla planifolia HOM05D000922 ORTHO05D007418 5.4e-161 572.8 834 41.5
Gohir.A12G275000 Gossypium hirsutum HOM05D000922 ORTHO05D007418 1.7e-154 551.2 741 45.5
CDE06G1806 Ceratophyllum demersum HOM05D000922 ORTHO05D007418 1.7e-151 541.2 750 43.1
Actinidia04732 Actinidia chinensis HOM05D000922 ORTHO05D007418 8.0e-149 532.3 870 40.7
Zm00001eb162380 Zea mays HOM05D000922 ORTHO05D007418 1.5e-126 458.4 419 56.3
Cpa.g.sc2974.2 Carica papaya HOM05D000922 ORTHO05D007418 6.6e-119 433.0 319 64.6
SHI17077 Sapria himalayana HOM05D000922 ORTHO05D007418 1.9e-118 431.4 757 35.3
Actinidia33077 Actinidia chinensis HOM05D000922 ORTHO05D007418 2.5e-118 431.0 515 47.6
SMO367G0209 Selaginella moellendorffii HOM05D000922 ORTHO05D007418 5.1e-111 406.8 498 41.4
Mapoly0023s0026 Marchantia polymorpha HOM05D000922 ORTHO05D007418 9.6e-110 402.5 659 40.2
SEGI_24933 Sequoiadendron giganteum HOM05D000922 ORTHO05D007418 4.8e-109 400.2 613 40.3
CsaV3_1G001450 Cucumis sativus L. HOM05D000922 ORTHO05D007418 9.9e-107 392.5 696 39.2
Pp3c26_1280 Physcomitrium patens HOM05D000922 ORTHO05D007418 2.4e-105 387.9 646 39.2
COL.COLO4_30068 Corchorus olitorius HOM05D000922 ORTHO05D007418 2.7e-104 384.4 625 39.0
SEGI_19196 Sequoiadendron giganteum HOM05D000922 ORTHO05D007418 3.0e-103 380.9 788 34.8
Actinidia19330 Actinidia chinensis HOM05D000922 ORTHO05D007418 7.6e-99 366.3 631 38.5
Dinv20638 Davidia involucrata HOM05D000922 ORTHO05D007418 7.2e-73 280.0 232 63.8
ECA246G4214 Erigeron canadensis HOM05D000922 ORTHO05D007418 6.1e-72 276.9 229 60.7
Cpa.g.sc2974.1 Carica papaya HOM05D000922 ORTHO05D007418 2.6e-67 261.5 586 35.8
C01p31950 Brassica napus HOM05D000922 ORTHO05D007418 2.2e-58 231.9 235 54.0
ECA246G0682 Erigeron canadensis HOM05D000922 ORTHO05D007418 6.5e-50 203.8 561 33.5
CDE07G0520 Ceratophyllum demersum HOM05D000922 ORTHO05D007418 5.7e-30 137.5 271 35.4
Peaxi162Scf00009g02111 Petunia axillaris HOM05D000861 ORTHO05D007418 9.2e-28 130.2 114 62.3
Psat4g066520 Pisum sativum HOM05D001026 ORTHO05D007418 7.0e-20 104.0 80 66.2
Peaxi162Scf00470g00024 Petunia axillaris HOM05D000861 ORTHO05D007418 2.7e-19 102.1 101 53.5
PRCOL_00005721 Prasinoderma coloniale HOM05D000922 ORTHO05D007418 3.0e-18 98.6 204 31.4
Peaxi162Scf00397g00009 Petunia axillaris HOM05D000922 ORTHO05D015732 5.0e-18 97.8 58 75.9
CAN.G1651.1 Capsicum annuum HOM05D003439 ORTHO05D000484 6.6e-18 97.4 68 70.6
Peaxi162Scf01130g00212 Petunia axillaris HOM05D000861 ORTHO05D007418 1.1e-17 96.7 49 89.8
Peaxi162Scf00304g01332 Petunia axillaris HOM05D000922 ORTHO05D007418 1.6e-16 92.8 53 79.2
vmacro19400 Vaccinium macrocarpon HOM05D000922 ORTHO05D007418 3.5e-11 75.1 236 25.0
Actinidia33076 Actinidia chinensis HOM05D000922 ORTHO05D007418 7.8e-11 73.9 177 35.0
Cfa000646 Carpinus fangiana HOM05D000922 ORTHO05D007418 2.8e-08 65.5 34 82.4
Peaxi162Scf00374g00720 Petunia axillaris HOM05D000861 ORTHO05D015732 4.7e-08 64.7 184 34.8


User provided reference genes

Program Settings