Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1166.12 Capsicum annuum HOM05D003532 ORTHO05D003298 3.6e-258 894.4 455 100.0
Sopen03g031830 Solanum pennellii HOM05D003532 ORTHO05D003298 1.0e-249 866.3 455 95.6
Solyc03g112750.4 Solanum lycopersicum HOM05D003532 ORTHO05D003298 1.4e-249 865.9 455 95.6
PGSC0003DMG400018160 Solanum tuberosum HOM05D003532 ORTHO05D003298 1.4e-246 855.9 455 94.5
Nitab4.5_0003218g0080 Nicotiana tabacum HOM05D003532 ORTHO05D003298 4.5e-245 850.9 455 93.2
Peaxi162Scf00568g00016 Petunia axillaris HOM05D003532 ORTHO05D003298 5.5e-243 844.0 455 92.5
Nitab4.5_0002423g0060 Nicotiana tabacum HOM05D003532 ORTHO05D003298 9.1e-238 826.6 455 91.0
Cc05_g14600 Coffea canephora HOM05D003532 ORTHO05D003298 8.3e-207 723.8 453 76.6
Rhsim06G0226200 Rhododendron simsii HOM05D003532 ORTHO05D003298 6.6e-204 714.1 455 76.7
Oeu019616.1 Olea europaea HOM05D003532 ORTHO05D003298 1.5e-203 713.0 453 77.3
vmacro11564 Vaccinium macrocarpon HOM05D003532 ORTHO05D003298 2.1e-202 709.1 455 76.9
CiPaw.11G200200 Carya illinoinensis HOM05D003532 ORTHO05D003298 1.4e-201 706.4 461 76.4
Cfa020236 Carpinus fangiana HOM05D003532 ORTHO05D003298 4.0e-201 704.9 457 76.8
Dinv10304 Davidia involucrata HOM05D003532 ORTHO05D003298 1.5e-200 703.0 459 76.3
COL.COLO4_09777 Corchorus olitorius HOM05D003532 ORTHO05D003298 2.0e-200 702.6 459 74.9
Duzib213G0377 Durio zibethinus HOM05D003532 ORTHO05D003298 3.4e-200 701.8 458 76.0
TPR.G1921 Trifolium pratense HOM05D003532 ORTHO05D003298 5.8e-200 701.0 454 76.4
Gohir.A01G086600 Gossypium hirsutum HOM05D003532 ORTHO05D003298 1.3e-199 699.9 458 75.3
Thecc.07G023400 Theobroma cacao HOM05D003532 ORTHO05D003298 1.3e-199 699.9 458 76.0
Prupe.4G231800 Prunus persica HOM05D003532 ORTHO05D003298 2.2e-199 699.1 461 76.4
ECA240G1125 Erigeron canadensis HOM05D003532 ORTHO05D003298 3.2e-198 695.3 456 74.8
Psat5g171200 Pisum sativum HOM05D003532 ORTHO05D003298 3.2e-198 695.3 454 75.8
QL08p005936 Quercus lobata HOM05D003532 ORTHO05D003298 2.1e-197 692.6 457 75.5
Medtr3g055970 Medicago truncatula HOM05D003532 ORTHO05D003298 2.7e-197 692.2 454 75.8
PGR083G2272 Punica granatum HOM05D003532 ORTHO05D003298 2.7e-197 692.2 455 75.6
arahy.Tifrunner.gnm1.ann1.5HZ9E9 Arachis hypogaea HOM05D003532 ORTHO05D003298 6.0e-197 691.0 456 75.9
Glyma.08G325400 Glycine max HOM05D003532 ORTHO05D003298 7.8e-197 690.6 454 75.3
Eucgr.F00625 Eucalyptus grandis HOM05D003532 ORTHO05D003298 3.0e-196 688.7 455 74.5
Gohir.D01G072800 Gossypium hirsutum HOM05D003532 ORTHO05D003298 3.9e-196 688.3 458 74.5
VMungo0540G1592 Vigna mungo HOM05D003532 ORTHO05D003298 5.1e-196 688.0 454 74.4
Gorai.002G095800 Gossypium raimondii HOM05D003532 ORTHO05D003298 1.1e-195 686.8 458 74.2
Manes.15G064000 Manihot esculenta HOM05D003532 ORTHO05D003298 2.5e-195 685.6 462 74.5
Lalb_Chr15g0081911 Lupinus albus HOM05D003532 ORTHO05D003298 7.3e-195 684.1 456 74.8
Haze_09779 Corylus avellana HOM05D003532 ORTHO05D003298 9.6e-195 683.7 457 75.1
MD03G1189500 Malus domestica HOM05D003532 ORTHO05D003298 1.6e-194 682.9 460 74.8
TWI39G0358 Tripterygium wilfordii HOM05D003532 ORTHO05D003298 2.1e-194 682.6 469 73.1
Phvul.006G052900 Phaseolus vulgaris HOM05D003532 ORTHO05D003298 2.8e-194 682.2 453 74.0
CSS0034495 Camellia sinensis var. sinensis HOM05D003532 ORTHO05D003298 3.6e-194 681.8 457 74.4
Glyma.18G081800 Glycine max HOM05D003532 ORTHO05D003298 3.6e-194 681.8 454 74.0
Aqoxy1G04019 Aquilegia oxysepala HOM05D003532 ORTHO05D003298 4.7e-194 681.4 465 72.5
FAN25G2872 Fragaria x ananassa HOM05D003532 ORTHO05D003298 1.8e-193 679.5 463 74.5
Ca_16739_v3 Cicer arietinum L. HOM05D003532 ORTHO05D003298 1.2e-192 676.8 454 74.4
Lj6g0018545 Lotus japonicus HOM05D003532 ORTHO05D003298 2.0e-192 676.0 456 74.6
Cpa.g.sc12.202 Carica papaya HOM05D003532 ORTHO05D003298 4.4e-192 674.9 455 73.8
RcHm_v2.0_Chr5g0042451 Rosa chinensis HOM05D003532 ORTHO05D003298 7.1e-190 667.5 466 73.0
TAR631G0007 Trochodendron aralioides HOM05D003532 ORTHO05D003298 1.6e-189 666.4 463 73.2
Potri.001G361200 Populus trichocarpa HOM05D003532 ORTHO05D003298 4.6e-189 664.8 462 73.4
ClCG09G021030 Citrullus lanatus HOM05D003532 ORTHO05D003298 3.0e-188 662.1 458 72.9
FAN11G2286 Fragaria x ananassa HOM05D003532 ORTHO05D003298 3.9e-188 661.8 463 72.8
Sc07g0002980 Simmondsia chinensis HOM05D003532 ORTHO05D003298 8.7e-188 660.6 456 71.5
Sed0014342 Sechium edule HOM05D003532 ORTHO05D003298 1.5e-187 659.8 458 71.6
FvH4_3g23950 Fragaria vesca HOM05D003532 ORTHO05D003298 1.9e-187 659.4 463 72.6
THA.LOC104811650 Tarenaya hassleriana HOM05D003532 ORTHO05D003298 1.9e-187 659.4 456 71.9
FAN21G0475 Fragaria x ananassa HOM05D003532 ORTHO05D003298 9.6e-187 657.1 463 72.1
Sabra16G0238200 Salix brachista HOM05D003532 ORTHO05D003298 1.6e-186 656.4 462 71.9
SalBow8G0547 Salvia bowleyana HOM05D003532 ORTHO05D003298 1.6e-186 656.4 462 71.9
FAN16G2517 Fragaria x ananassa HOM05D003532 ORTHO05D003298 2.1e-186 656.0 463 72.1
Lsat_1_v5_gn_0_15220 Lactuca sativa HOM05D003532 ORTHO05D003298 1.4e-185 653.3 453 71.7
Ah.06g181150 Amaranthus hybridus HOM05D003532 ORTHO05D003298 3.1e-185 652.1 456 71.1
Ciclev10007256m.g Citrus clementina HOM05D003532 ORTHO05D003298 4.0e-185 651.7 460 72.0
FAN25G3696 Fragaria x ananassa HOM05D003532 ORTHO05D003298 9.0e-185 650.6 463 71.9
Nn1g07430 Nelumbo nucifera HOM05D003532 ORTHO05D003298 9.0e-185 650.6 461 70.3
CANSAT11G0309 Cannabis sativa HOM05D003532 ORTHO05D003298 1.4e-182 643.3 461 71.8
Hund23137 Selenicereus undatus HOM05D003532 ORTHO05D003298 2.4e-182 642.5 454 70.9
Atru.chr2.3624 Acer truncatum HOM05D003532 ORTHO05D003298 5.4e-182 641.3 459 70.6
Migut.M01683 Erythranthe guttata HOM05D003532 ORTHO05D003298 1.3e-180 636.7 457 71.1
MELO3C024898.2 Cucumis melo HOM05D003532 ORTHO05D003298 8.7e-180 634.0 458 70.5
DCAR_016632 Daucus carota HOM05D003532 ORTHO05D003298 1.1e-179 633.6 459 67.8
AT5G55540 Arabidopsis thaliana HOM05D003532 ORTHO05D003298 2.5e-179 632.5 457 69.8
AUR62015940 Chenopodium quinoa HOM05D003532 ORTHO05D003298 2.5e-179 632.5 455 68.8
PSO210G6712 Papaver somniferum HOM05D003532 ORTHO05D003298 5.6e-179 631.3 453 69.1
AL8G31090 Arabidopsis lyrata HOM05D003532 ORTHO05D003298 7.4e-179 630.9 457 69.4
CsaV3_7G018660 Cucumis sativus L. HOM05D003532 ORTHO05D003298 7.4e-179 630.9 458 69.9
Carub.0008s1589 Capsella rubella HOM05D003532 ORTHO05D003298 3.1e-177 625.5 457 68.9
CARHR268860 Cardamine hirsuta HOM05D003532 ORTHO05D003298 2.0e-176 622.9 457 67.2
EL10Ac4g07624 Beta vulgaris HOM05D003532 ORTHO05D003298 1.8e-172 609.8 434 70.7
BcaB08g35909 Brassica carinata HOM05D003532 ORTHO05D003298 1.1e-171 607.1 457 67.4
Sp6g17430 Schrenkiella parvula HOM05D003532 ORTHO05D003298 1.3e-170 603.6 457 65.9
A10p12730 Brassica napus HOM05D003532 ORTHO05D003298 3.1e-169 599.0 457 65.9
BraA10t43365Z Brassica rapa HOM05D003532 ORTHO05D003298 3.1e-169 599.0 457 65.9
Thhalv10012444m.g Eutrema salsugineum HOM05D003532 ORTHO05D003298 6.9e-169 597.8 455 65.3
C09p46210 Brassica napus HOM05D003532 ORTHO05D003298 5.8e-168 594.7 457 65.9
BolC9t57486H Brassica oleracea HOM05D003532 ORTHO05D003298 7.6e-168 594.3 457 65.9
Actinidia00098 Actinidia chinensis HOM05D003532 ORTHO05D003298 1.0e-159 567.4 459 65.4
unitig_899.g15279 Utricularia gibba HOM05D003532 ORTHO05D003298 2.9e-159 565.8 456 62.9
SHI26496 Sapria himalayana HOM05D003532 ORTHO05D003298 3.7e-154 548.9 460 61.7
SGA_v2.0_scaffold171G38893 Striga asiatica HOM05D003532 ORTHO05D003298 6.1e-149 531.6 455 59.8
HPP92_012225 Vanilla planifolia HOM05D003532 ORTHO05D003298 9.1e-145 517.7 424 61.6
ATR0712G118 Amborella trichopoda HOM05D003532 ORTHO05D003298 5.5e-142 508.4 461 54.4
Lj1P884T43 Lonicera japonica HOM05D003532 ORTHO05D003298 1.2e-141 507.3 456 59.9
Aa31LG3G11480 Aethionema arabicum HOM05D003532 ORTHO05D003298 1.2e-136 490.7 437 59.5
Zm00001eb057430 Zea mays HOM05D003532 ORTHO05D003298 1.7e-135 486.9 456 54.6
MBI19_g37319_MAGBIO Magnolia biondii HOM05D003532 ORTHO05D003298 1.4e-116 424.1 368 59.8
AUR62040668 Chenopodium quinoa HOM05D003532 ORTHO05D003298 5.2e-108 395.6 288 68.4
GSVIVG01037769001 Vitis vinifera HOM05D003532 ORTHO05D003298 1.2e-93 347.8 455 46.4
Actinidia04774 Actinidia chinensis HOM05D003532 ORTHO05D003298 1.6e-85 320.9 460 43.5
MD11G1205800 Malus domestica HOM05D003532 ORTHO05D003298 2.5e-54 217.2 172 65.7
AUR62040669 Chenopodium quinoa HOM05D003532 ORTHO05D003298 3.3e-54 216.9 154 68.2
MD11G1205700 Malus domestica HOM05D003532 ORTHO05D003298 4.1e-44 183.3 149 65.8
AagrBONN_evm.TU.Sc2ySwM_362.2762 Anthoceros agrestis HOM05D003532 ORTHO05D003298 2.1e-40 171.0 466 29.2
CDE04G0250 Ceratophyllum demersum HOM05D003532 ORTHO05D003298 3.6e-32 143.7 130 56.2
Pp3c3_24130 Physcomitrium patens HOM05D003532 ORTHO05D003298 1.0e-26 125.6 459 24.4
AagrBONN_evm.TU.Sc2ySwM_368.1056 Anthoceros agrestis HOM05D003532 ORTHO05D003298 2.2e-26 124.4 456 27.2
Pp3c10_20720 Physcomitrium patens HOM05D003532 ORTHO05D003298 2.7e-24 117.5 451 23.7
CBR_g38589 Chara braunii HOM05D003532 ORTHO05D003298 5.2e-23 113.2 461 22.8
AagrBONN_evm.TU.Sc2ySwM_368.330 Anthoceros agrestis HOM05D002844 ORTHO05D003298 1.1e-22 112.1 493 25.6
AagrBONN_evm.TU.Sc2ySwM_368.290 Anthoceros agrestis HOM05D002844 ORTHO05D003298 2.6e-22 110.9 492 25.2
AagrBONN_evm.TU.Sc2ySwM_368.264 Anthoceros agrestis HOM05D003532 ORTHO05D003298 3.3e-22 110.5 508 24.6
CBR_g38594 Chara braunii HOM05D003532 ORTHO05D003298 1.3e-21 108.6 458 24.0
CBR_g12185 Chara braunii HOM05D003532 ORTHO05D003298 6.3e-21 106.3 458 24.0
CBR_g40030 Chara braunii HOM05D007859 ORTHO05D003298 5.3e-20 103.2 467 23.3
PGSC0003DMG401018159 Solanum tuberosum HOM05D003532 ORTHO05D003298 2.6e-19 100.9 58 87.9
CBR_g38597 Chara braunii HOM05D003532 ORTHO05D003298 4.5e-19 100.1 461 23.2
CBR_g38599 Chara braunii HOM05D003532 ORTHO05D003298 5.9e-19 99.8 455 23.3
AagrBONN_evm.TU.Sc2ySwM_368.274 Anthoceros agrestis HOM05D003532 ORTHO05D003298 2.2e-18 97.8 411 24.8
Mapoly0046s0036 Marchantia polymorpha HOM05D003532 ORTHO05D003298 3.8e-18 97.1 448 26.3
AagrBONN_evm.TU.Sc2ySwM_362.556 Anthoceros agrestis HOM05D003532 ORTHO05D003298 1.2e-16 92.0 486 22.6
CBR_g12182 Chara braunii HOM05D003532 ORTHO05D003298 2.7e-16 90.9 454 21.6
AagrBONN_evm.TU.Sc2ySwM_362.1324 Anthoceros agrestis HOM05D002844 ORTHO05D003298 3.6e-16 90.5 470 23.2
CBR_g40961 Chara braunii HOM05D003532 ORTHO05D000353 4.7e-16 90.1 473 24.9
AagrBONN_evm.TU.Sc2ySwM_344.5368 Anthoceros agrestis HOM05D003532 ORTHO05D003298 4.0e-15 87.0 426 24.9
CBR_g45627 Chara braunii HOM05D003532 ORTHO05D003298 5.2e-15 86.7 500 24.2
Mapoly0157s0002 Marchantia polymorpha HOM05D003532 ORTHO05D003298 1.5e-14 85.1 443 23.0
CBR_g12864 Chara braunii HOM05D003532 ORTHO05D003298 2.6e-14 84.3 478 22.2
CAN.G205.7 Capsicum annuum HOM05D003532 ORTHO05D003298 4.4e-14 83.6 50 90.0
CBR_g38576 Chara braunii HOM05D003532 ORTHO05D003298 2.2e-13 81.3 511 24.3
AagrBONN_evm.TU.Sc2ySwM_362.1906 Anthoceros agrestis HOM05D003532 ORTHO05D003298 3.5e-11 73.9 383 22.2
CBR_g12867 Chara braunii HOM05D000019 ORTHO05D003298 3.5e-11 73.9 482 22.4
AagrBONN_evm.TU.Sc2ySwM_368.626 Anthoceros agrestis HOM05D003532 ORTHO05D003298 4.5e-11 73.6 149 30.9
Lsat_1_v5_gn_3_17020 Lactuca sativa HOM05D003532 ORTHO05D003298 7.7e-11 72.8 84 50.0
AagrBONN_evm.TU.Sc2ySwM_117.4103 Anthoceros agrestis HOM05D003532 ORTHO05D003298 1.3e-10 72.0 142 29.6
AagrBONN_evm.TU.Sc2ySwM_368.236 Anthoceros agrestis HOM05D003532 ORTHO05D015853 1.3e-10 72.0 238 27.3
Mapoly0182s0017 Marchantia polymorpha HOM05D003532 ORTHO05D003298 3.8e-10 70.5 481 22.0
CBR_g46414 Chara braunii HOM05D003532 ORTHO05D003298 6.5e-10 69.7 482 21.8
AagrBONN_evm.TU.Sc2ySwM_344.5219 Anthoceros agrestis HOM05D003532 ORTHO05D003298 3.2e-09 67.4 131 29.8
AagrBONN_evm.TU.Sc2ySwM_117.4056 Anthoceros agrestis HOM05D002844 ORTHO05D003298 4.2e-09 67.0 205 27.3
AagrBONN_evm.TU.Sc2ySwM_362.1938 Anthoceros agrestis HOM05D003532 ORTHO05D003298 4.2e-09 67.0 484 22.3
AagrBONN_evm.TU.Sc2ySwM_362.995 Anthoceros agrestis HOM05D003532 ORTHO05D003298 5.5e-09 66.6 174 30.5
AagrBONN_evm.TU.Sc2ySwM_368.2565 Anthoceros agrestis HOM05D003532 ORTHO05D003298 9.4e-09 65.9 126 38.9
CBR_g12862 Chara braunii HOM05D003532 ORTHO05D003298 1.2e-08 65.5 245 24.5
AagrBONN_evm.TU.Sc2ySwM_368.391 Anthoceros agrestis HOM05D002844 ORTHO05D015853 2.7e-08 64.3 260 25.8
AagrBONN_evm.TU.Sc2ySwM_362.2508 Anthoceros agrestis HOM05D002844 ORTHO05D010627 3.6e-08 63.9 175 25.1
AagrBONN_evm.TU.Sc2ySwM_344.1379 Anthoceros agrestis HOM05D003532 ORTHO05D015853 6.1e-08 63.2 192 27.1
CBR_g85241 Chara braunii HOM05D003532 ORTHO05D003298 6.1e-08 63.2 276 20.7
AagrBONN_evm.TU.Sc2ySwM_228.83 Anthoceros agrestis HOM05D002844 ORTHO05D010627 1.4e-07 62.0 135 30.4
AagrBONN_evm.TU.Sc2ySwM_340.456 Anthoceros agrestis HOM05D002844 ORTHO05D010627 2.3e-07 61.2 166 29.5
AagrBONN_evm.TU.Sc2ySwM_368.360__361 Anthoceros agrestis HOM05D002844 ORTHO05D003298 3.0e-07 60.8 174 28.2
AagrBONN_evm.TU.Sc2ySwM_344.5221 Anthoceros agrestis HOM05D003532 ORTHO05D003298 4.0e-07 60.5 85 32.9
AagrBONN_evm.TU.Sc2ySwM_117.3748 Anthoceros agrestis HOM05D002844 ORTHO05D010627 5.2e-07 60.1 132 28.8
AagrBONN_evm.TU.Sc2ySwM_117.4062 Anthoceros agrestis HOM05D003532 ORTHO05D015853 6.8e-07 59.7 358 22.9
AagrBONN_evm.TU.Sc2ySwM_340.458 Anthoceros agrestis HOM05D002844 ORTHO05D010627 8.8e-07 59.3 174 26.4
AagrBONN_evm.TU.Sc2ySwM_362.449 Anthoceros agrestis HOM05D002844 ORTHO05D010627 1.2e-06 58.9 136 27.9
AagrBONN_evm.TU.Sc2ySwM_340.760 Anthoceros agrestis HOM05D008597 ORTHO05D003298 1.5e-06 58.5 168 29.2
Mapoly0068s0033 Marchantia polymorpha HOM05D003532 ORTHO05D003298 4.4e-06 57.0 117 27.4
AagrBONN_evm.TU.Sc2ySwM_362.460 Anthoceros agrestis HOM05D002844 ORTHO05D003298 7.5e-06 56.2 151 26.5
AagrBONN_evm.TU.Sc2ySwM_362.1677 Anthoceros agrestis HOM05D021531 ORTHO05D015853 9.8e-06 55.8 166 25.9


User provided reference genes

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