Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G116.13 Capsicum annuum HOM05D000458 ORTHO05D010544 4.7e-146 521.2 261 100.0
CAN.G650.33 Capsicum annuum HOM05D000458 ORTHO05D010544 1.2e-104 383.6 264 78.0
CAN.G650.31 Capsicum annuum HOM05D000458 ORTHO05D010544 1.6e-101 373.2 270 75.9
Sopen10g006630 Solanum pennellii HOM05D000458 ORTHO05D010544 1.2e-53 214.2 282 48.2
Solyc10g017710.1 Solanum lycopersicum HOM05D000458 ORTHO05D010544 1.6e-53 213.8 282 47.9
PGSC0003DMG400010274 Solanum tuberosum HOM05D000458 ORTHO05D010544 2.7e-53 213.0 280 45.0
PGSC0003DMG400035685 Solanum tuberosum HOM05D000458 ORTHO05D010544 5.7e-51 205.3 284 47.2
PGSC0003DMG400010261 Solanum tuberosum HOM05D000458 ORTHO05D010544 1.7e-50 203.8 259 49.8
Solyc10g017690.1 Solanum lycopersicum HOM05D000458 ORTHO05D010544 2.2e-50 203.4 264 49.2
CAN.G116.11 Capsicum annuum HOM05D000458 ORTHO05D010544 6.3e-50 201.8 275 44.7
Sopen10g006670 Solanum pennellii HOM05D000458 ORTHO05D010544 4.1e-49 199.1 269 43.5
Solyc10g017830.1 Solanum lycopersicum HOM05D000458 ORTHO05D010544 7.0e-49 198.4 269 43.5
PGSC0003DMG400045985 Solanum tuberosum HOM05D000458 ORTHO05D010544 4.5e-48 195.7 269 46.5
Nitab4.5_0003356g0070 Nicotiana tabacum HOM05D000458 ORTHO05D010544 5.0e-47 192.2 265 48.3
Sopen10g006620 Solanum pennellii HOM05D000458 ORTHO05D010544 5.0e-47 192.2 263 46.8
Nitab4.5_0000134g0190 Nicotiana tabacum HOM05D000458 ORTHO05D010544 6.5e-47 191.8 262 48.9
Solyc10g017700.1 Solanum lycopersicum HOM05D000458 ORTHO05D010544 8.5e-47 191.4 263 46.4
PGSC0003DMG400010262 Solanum tuberosum HOM05D000458 ORTHO05D010544 7.2e-46 188.3 267 45.7
Peaxi162Scf00008g00144 Petunia axillaris HOM05D000458 ORTHO05D010544 2.6e-35 153.3 286 39.2
Peaxi162Scf00008g00141 Petunia axillaris HOM05D000458 ORTHO05D010544 7.5e-35 151.8 279 39.4
Sopen10g006610 Solanum pennellii HOM05D000002 ORTHO05D000001 3.3e-30 136.3 174 48.9
Nitab4.5_0003865g0110 Nicotiana tabacum HOM05D003859 ORTHO05D010544 7.3e-22 108.6 267 36.3
Peaxi162Scf00008g00143 Petunia axillaris HOM05D000458 ORTHO05D010544 3.6e-21 106.3 213 39.0
Nitab4.5_0000258g0310 Nicotiana tabacum HOM05D003859 ORTHO05D004927 6.2e-21 105.5 272 36.8
Peaxi162Scf00716g00517 Petunia axillaris HOM05D000458 ORTHO05D010544 6.2e-21 105.5 291 33.0
Peaxi162Scf00218g00725 Petunia axillaris HOM05D000458 ORTHO05D010544 1.4e-20 104.4 291 32.6
Peaxi162Scf00716g00518 Petunia axillaris HOM05D000458 ORTHO05D010544 3.7e-18 96.3 307 31.6
Peaxi162Scf19853g00003 Petunia axillaris HOM05D000458 ORTHO05D010544 3.7e-18 96.3 307 31.6
PGSC0003DMG400007002 Solanum tuberosum HOM05D000458 ORTHO05D010544 3.7e-18 96.3 264 32.2
CAN.G116.19 Capsicum annuum HOM05D000458 ORTHO05D010544 3.2e-17 93.2 252 31.0
CAN.G360.12 Capsicum annuum HOM05D000458 ORTHO05D010544 4.1e-17 92.8 293 33.1
Peaxi162Scf00928g00126 Petunia axillaris HOM05D000458 ORTHO05D010544 6.0e-16 89.0 296 31.8
Peaxi162Scf00716g00430 Petunia axillaris HOM05D003859 ORTHO05D010544 1.0e-15 88.2 286 31.8
Sopen05g029080 Solanum pennellii HOM05D000458 ORTHO05D010544 1.0e-15 88.2 233 33.9
Peaxi162Scf00716g00427 Petunia axillaris HOM05D000458 ORTHO05D010544 2.3e-15 87.0 332 28.0
PGSC0003DMG400035338 Solanum tuberosum HOM05D000458 ORTHO05D010544 2.3e-15 87.0 228 33.8
Sopen05g028870 Solanum pennellii HOM05D000458 ORTHO05D010544 3.0e-15 86.7 274 33.2
Oeu036061.1 Olea europaea HOM05D000458 ORTHO05D010544 3.9e-15 86.3 256 32.0
Peaxi162Scf00184g00083 Petunia axillaris HOM05D000458 ORTHO05D010544 5.1e-15 85.9 263 30.0
Sopen05g028880 Solanum pennellii HOM05D000458 ORTHO05D010544 5.1e-15 85.9 219 33.3
Solyc05g050470.1 Solanum lycopersicum HOM05D000458 ORTHO05D010544 6.6e-15 85.5 274 32.8
PGSC0003DMG400037557 Solanum tuberosum HOM05D000458 ORTHO05D010544 6.6e-15 85.5 146 44.5
PGSC0003DMG400007004 Solanum tuberosum HOM05D000458 ORTHO05D010544 8.6e-15 85.1 182 34.6
Solyc05g050480.1 Solanum lycopersicum HOM05D000458 ORTHO05D010544 3.3e-14 83.2 223 33.2
Solyc05g050670.2 Solanum lycopersicum HOM05D000458 ORTHO05D010544 1.6e-13 80.9 260 31.5
Sopen05g028890 Solanum pennellii HOM05D000458 ORTHO05D010544 6.2e-13 79.0 223 31.8
Solyc05g050490.4 Solanum lycopersicum HOM05D003859 ORTHO05D004927 2.3e-12 77.0 223 30.5
SGA_v2.0_scaffold95G28912 Striga asiatica HOM05D000458 ORTHO05D010544 4.0e-12 76.3 200 34.5
Oeu044460.1 Olea europaea HOM05D000458 ORTHO05D010544 2.6e-11 73.6 167 32.3
TWI73G0007 Tripterygium wilfordii HOM05D000458 ORTHO05D006287 4.4e-11 72.8 251 30.7
Ah.04g157290 Amaranthus hybridus HOM05D000458 ORTHO05D006287 9.9e-11 71.6 239 31.0
CAN.G84.1 Capsicum annuum HOM05D000458 ORTHO05D010544 1.3e-10 71.2 101 39.6
Cpa.g.sc44.104 Carica papaya HOM05D000458 ORTHO05D006287 1.7e-10 70.9 250 30.8
DCAR_010486 Daucus carota HOM05D000458 ORTHO05D010544 2.2e-10 70.5 189 33.3
Prupe.1G033800 Prunus persica HOM05D000458 ORTHO05D006287 2.9e-10 70.1 254 28.7
unitig_62.g23643 Utricularia gibba HOM05D000458 ORTHO05D000951 2.9e-10 70.1 217 29.0
AUR62007046 Chenopodium quinoa HOM05D000458 ORTHO05D000951 3.8e-10 69.7 215 28.8
AUR62019910 Chenopodium quinoa HOM05D000458 ORTHO05D000951 3.8e-10 69.7 215 28.8
Duzib052G0064 Durio zibethinus HOM05D000458 ORTHO05D006287 3.8e-10 69.7 255 30.2
Oeu003578.1 Olea europaea HOM05D000458 ORTHO05D006287 1.1e-09 68.2 247 28.3
EL10Ac3g05902 Beta vulgaris HOM05D000458 ORTHO05D006287 1.4e-09 67.8 237 29.5
CANSAT78G0224 Cannabis sativa HOM05D000458 ORTHO05D006287 1.9e-09 67.4 247 28.3
AL7G29190 Arabidopsis lyrata HOM05D000458 ORTHO05D000951 2.4e-09 67.0 216 30.6
Peaxi162Scf00074g00350 Petunia axillaris HOM05D000458 ORTHO05D000951 2.4e-09 67.0 215 28.4
AT4G24100 Arabidopsis thaliana HOM05D000458 ORTHO05D000951 3.2e-09 66.6 216 30.6
Thhalv10024570m.g Eutrema salsugineum HOM05D000458 ORTHO05D000951 3.2e-09 66.6 216 30.1
Peaxi162Scf00637g00111 Petunia axillaris HOM05D000458 ORTHO05D010544 3.2e-09 66.6 196 32.1
CiPaw.01G188800 Carya illinoinensis HOM05D000458 ORTHO05D006287 4.1e-09 66.2 245 28.6
Duzib052G1233 Durio zibethinus HOM05D000458 ORTHO05D006287 4.1e-09 66.2 248 29.8
Gohir.A10G126974 Gossypium hirsutum HOM05D000458 ORTHO05D006287 4.1e-09 66.2 180 31.7
Sp7g22060 Schrenkiella parvula HOM05D000458 ORTHO05D000951 4.1e-09 66.2 216 30.1
CAN.G567.83 Capsicum annuum HOM05D000458 ORTHO05D000951 5.4e-09 65.9 217 28.1
Nn3g19588 Nelumbo nucifera HOM05D000458 ORTHO05D006287 7.1e-09 65.5 188 29.3
Potri.008G163800 Populus trichocarpa HOM05D000458 ORTHO05D006287 7.1e-09 65.5 272 30.1
Carub.0007s1700 Capsella rubella HOM05D000458 ORTHO05D000951 9.2e-09 65.1 216 31.0
CAN.G1867.4 Capsicum annuum HOM05D000458 ORTHO05D006287 9.2e-09 65.1 248 27.8
CARHR231500 Cardamine hirsuta HOM05D000458 ORTHO05D000951 9.2e-09 65.1 216 30.6
Cpa.g.sc44.100 Carica papaya HOM05D000458 ORTHO05D006287 9.2e-09 65.1 261 29.1
Gohir.D10G139601 Gossypium hirsutum HOM05D000458 ORTHO05D006287 9.2e-09 65.1 180 30.6
Gorai.011G155200 Gossypium raimondii HOM05D000458 ORTHO05D006287 9.2e-09 65.1 180 30.6
Manes.02G003325 Manihot esculenta HOM05D000458 ORTHO05D000951 9.2e-09 65.1 217 29.0
BcaC09g50911 Brassica carinata HOM05D000458 ORTHO05D000951 1.2e-08 64.7 216 29.2
A01p15360 Brassica napus HOM05D000458 ORTHO05D000951 1.2e-08 64.7 216 29.2
C01p19310 Brassica napus HOM05D000458 ORTHO05D000951 1.2e-08 64.7 216 29.2
BolC1t01857H Brassica oleracea HOM05D000458 ORTHO05D000951 1.2e-08 64.7 216 29.2
BraA01t01481Z Brassica rapa HOM05D000458 ORTHO05D000951 1.2e-08 64.7 216 29.2
Gohir.A08G081600 Gossypium hirsutum HOM05D000458 ORTHO05D000951 1.2e-08 64.7 215 32.1
Gohir.A11G019100 Gossypium hirsutum HOM05D000458 ORTHO05D000951 1.2e-08 64.7 215 31.2
Gohir.D08G123200 Gossypium hirsutum HOM05D000458 ORTHO05D000951 1.2e-08 64.7 215 32.1
Gorai.004G130000 Gossypium raimondii HOM05D000458 ORTHO05D000951 1.2e-08 64.7 215 32.1
Duzib205G0849 Durio zibethinus HOM05D000458 ORTHO05D000951 1.6e-08 64.3 215 31.2
Sabra01G0061400 Salix brachista HOM05D000458 ORTHO05D000951 1.6e-08 64.3 215 29.3
AUR62002258 Chenopodium quinoa HOM05D000458 ORTHO05D006287 2.1e-08 63.9 237 30.0
AUR62015475 Chenopodium quinoa HOM05D000458 ORTHO05D006287 2.1e-08 63.9 237 28.3
Duzib151G0227 Durio zibethinus HOM05D000458 ORTHO05D006287 2.1e-08 63.9 212 29.2
Sabra08G0124800 Salix brachista HOM05D000458 ORTHO05D006287 2.1e-08 63.9 272 28.7
CARHR255870 Cardamine hirsuta HOM05D000458 ORTHO05D000951 2.7e-08 63.5 215 29.8
DCAR_017556 Daucus carota HOM05D027795 ORTHO05D178223 2.7e-08 63.5 202 30.7
Thecc.03G221800 Theobroma cacao HOM05D000458 ORTHO05D000951 2.7e-08 63.5 215 31.2
Ciclev10004796m.g Citrus clementina HOM05D000458 ORTHO05D006287 3.5e-08 63.2 261 28.0
Gohir.A10G126937 Gossypium hirsutum HOM05D000458 ORTHO05D006287 4.6e-08 62.8 180 30.0
BcaNung01114 Brassica carinata HOM05D000458 ORTHO05D000951 6.0e-08 62.4 216 28.7
COL.COLO4_10789 Corchorus olitorius HOM05D000458 ORTHO05D000951 6.0e-08 62.4 215 31.6
Sed0026622 Sechium edule HOM05D000458 ORTHO05D000951 6.0e-08 62.4 215 27.4
Thecc.07G122500 Theobroma cacao HOM05D000458 ORTHO05D000951 7.8e-08 62.0 215 30.7
Aa31LG6G7340 Aethionema arabicum HOM05D000458 ORTHO05D000951 1.0e-07 61.6 217 29.0
Gohir.A10G127011 Gossypium hirsutum HOM05D000458 ORTHO05D006287 1.0e-07 61.6 176 32.4
Cpa.g.sc44.102 Carica papaya HOM05D000458 ORTHO05D006287 1.7e-07 60.8 202 31.2
Gohir.D10G139750 Gossypium hirsutum HOM05D000458 ORTHO05D006287 1.7e-07 60.8 176 29.5
Oeu048707.1 Olea europaea HOM05D000458 ORTHO05D006287 1.7e-07 60.8 234 28.6
Eucgr.D01685 Eucalyptus grandis HOM05D000458 ORTHO05D000951 3.0e-07 60.1 256 26.6
Gohir.D12G240900 Gossypium hirsutum HOM05D000458 ORTHO05D000951 3.0e-07 60.1 215 30.2
Gorai.008G258000 Gossypium raimondii HOM05D000458 ORTHO05D000951 3.0e-07 60.1 215 30.2
Thecc.07G119200 Theobroma cacao HOM05D000458 ORTHO05D000951 3.0e-07 60.1 223 30.9
Thecc.07G121000 Theobroma cacao HOM05D000458 ORTHO05D000951 3.0e-07 60.1 216 31.0
Thecc.07G120700 Theobroma cacao HOM05D000458 ORTHO05D000951 3.9e-07 59.7 216 31.0
Atru.chr4.2154 Acer truncatum HOM05D000458 ORTHO05D006287 6.6e-07 58.9 272 26.5
Cpa.g.sc44.101 Carica papaya HOM05D000458 ORTHO05D006287 6.6e-07 58.9 247 28.7
Gohir.D10G138760 Gossypium hirsutum HOM05D000458 ORTHO05D006287 6.6e-07 58.9 180 33.3
Thecc.07G122200 Theobroma cacao HOM05D000458 ORTHO05D000951 6.6e-07 58.9 216 31.0
Cfa014820 Carpinus fangiana HOM05D000458 ORTHO05D006287 1.1e-06 58.2 168 28.0
Cfa014822 Carpinus fangiana HOM05D000458 ORTHO05D006287 1.9e-06 57.4 168 27.4
SHI06905 Sapria himalayana HOM05D000458 ORTHO05D000951 4.3e-06 56.2 160 28.8
PGSC0003DMG400028914 Solanum tuberosum HOM05D000458 ORTHO05D000951 5.6e-06 55.8 262 27.5
Solyc06g068590.4 Solanum lycopersicum HOM05D000458 ORTHO05D000951 9.6e-06 55.1 262 27.1
Sopen06g025850 Solanum pennellii HOM05D000458 ORTHO05D000951 9.6e-06 55.1 262 27.1


User provided reference genes

Program Settings